Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3206

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
91,799	+				+0.3
92,690	-				+0.7
92,779	+		GFF3206	0.20	-1.2
93,182	-		GFF3206	0.89	-0.8
93,182	-		GFF3206	0.89	-1.6
93,241	+				-0.3
93,241	+				+0.2
93,242	-				+0.2
93,242	-				-0.6
93,242	-				-2.3
93,321	-				+0.3
93,345	-		GFF3207	0.11	-0.4
93,464	+		GFF3207	0.25	-1.4
93,539	+		GFF3207	0.35	+2.1
93,587	+		GFF3207	0.41	-0.6
93,587	+		GFF3207	0.41	-0.1
93,588	-		GFF3207	0.41	-0.5
93,588	-		GFF3207	0.41	-0.3
94,068	-				+0.5
94,189	+				-0.3