Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3204

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
90,493	-				-1.3
90,519	+				-0.0
90,557	+				-0.1
90,557	+				+0.2
90,595	-				-0.4
90,595	-				+0.2
90,595	-				-0.1
91,272	+				+0.0
91,409	+		GFF3204	0.40	+1.1
91,410	-		GFF3204	0.40	+0.6
91,430	+		GFF3204	0.45	-1.0
91,431	-		GFF3204	0.45	-0.0
91,431	-		GFF3204	0.45	+0.8
91,799	+				+0.3