Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2898

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
485,883	+				-0.4
485,884	-				-0.6
486,535	-		GFF2897	0.81	-1.0
486,535	-		GFF2897	0.81	-0.6
487,231	+				-0.4
487,256	-				+1.0
487,468	+		GFF2899	0.12	-0.7
487,481	-		GFF2899	0.13	-1.8
487,711	+		GFF2899	0.22	-1.0
487,712	-		GFF2899	0.22	-0.2
487,712	-		GFF2899	0.22	-0.2
487,762	+		GFF2899	0.24	-0.2
487,763	-		GFF2899	0.24	-1.0