Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2149

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
1,039,379	+		GFF2148	0.50	-0.8
1,039,775	+		GFF2148	0.73	+0.1
1,039,884	-		GFF2148	0.79	+0.2
1,039,887	+		GFF2148	0.79	-0.1
1,040,012	+		GFF2148	0.86	+0.2
1,040,012	+		GFF2148	0.86	+0.7
1,040,036	+		GFF2148	0.87	-2.0
1,040,240	+				+0.3
1,040,313	-				-0.4
1,040,384	-		GFF2149	0.13	+0.2
1,040,389	+		GFF2149	0.14	+0.3
1,040,389	+		GFF2149	0.14	+0.7
1,040,389	+		GFF2149	0.14	+0.1
1,040,390	-		GFF2149	0.14	+0.1
1,040,390	-		GFF2149	0.14	+0.8
1,040,446	+		GFF2149	0.22	-0.0
1,040,731	+		GFF2149	0.61	+0.4
1,040,731	+		GFF2149	0.61	-0.2
1,040,731	+		GFF2149	0.61	+0.3
1,041,321	+		GFF2150	0.34	+0.6
1,041,321	+		GFF2150	0.34	+0.2
1,041,321	+		GFF2150	0.34	-0.4
1,041,322	-		GFF2150	0.34	-0.2
1,041,322	-		GFF2150	0.34	-0.0
1,041,430	-		GFF2150	0.46	-0.4
1,041,748	-		GFF2150	0.81	-1.2