Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF107

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
114,474	-		GFF106	0.31	-1.7
114,502	+		GFF106	0.33	-0.1
114,821	-		GFF106	0.55	-0.4
114,821	-		GFF106	0.55	-0.4
114,949	+		GFF106	0.64	-0.4
114,949	+		GFF106	0.64	+0.1
114,949	+		GFF106	0.64	-0.7
114,950	-		GFF106	0.64	-0.0
114,950	-		GFF106	0.64	-0.3
114,950	-		GFF106	0.64	+0.5
115,628	-		GFF107	0.26	-1.8
115,763	+		GFF107	0.49	-1.3
115,764	-		GFF107	0.49	-0.8
115,764	-		GFF107	0.49	-0.3
115,764	-		GFF107	0.49	-0.5
115,764	-		GFF107	0.49	-0.6
115,764	-		GFF107	0.49	-1.5
115,800	-		GFF107	0.55	-1.2
116,059	-				-0.9
116,059	-				-2.2
116,079	+				-1.1
116,082	+				-0.5
116,083	-				-0.7
116,083	-				-0.5
116,105	+				-0.0
116,105	+				+2.3
116,137	+				-0.1
116,137	+				-0.6
116,138	-				+0.2
116,157	+				-1.7
116,158	-				+0.3
116,158	-				+0.1
116,163	+				-1.7
116,189	+				+0.8
116,189	+				-0.9
116,190	-				-0.4
116,190	-				-0.0
116,190	-				-0.5
116,274	+				-1.1
116,274	+				+0.3
116,274	+				-1.6
116,275	-				-0.1
116,275	-				-0.1
116,275	-				-0.6
116,275	-				-0.7
116,275	-				+0.1