Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02576

Experiment: Galactan from Potato 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02573 and BACOVA_02574 are separated by 13 nucleotidesBACOVA_02574 and BACOVA_02575 are separated by 226 nucleotidesBACOVA_02575 and BACOVA_02576 are separated by 35 nucleotidesBACOVA_02576 and BACOVA_02577 are separated by 143 nucleotidesBACOVA_02577 and BACOVA_02578 are separated by 162 nucleotidesBACOVA_02578 and BACOVA_02579 are separated by 120 nucleotidesBACOVA_02579 and BACOVA_02580 are separated by 63 nucleotides BACOVA_02573: BACOVA_02573 - hypothetical protein, at 341,982 to 342,491 _02573 BACOVA_02574: BACOVA_02574 - hypothetical protein, at 342,505 to 342,801 _02574 BACOVA_02575: BACOVA_02575 - tRNA-Pro, at 343,028 to 343,102 _02575 BACOVA_02576: BACOVA_02576 - tRNA-Pro, at 343,138 to 343,212 _02576 BACOVA_02577: BACOVA_02577 - hypothetical protein, at 343,356 to 343,523 _02577 BACOVA_02578: BACOVA_02578 - hypothetical protein, at 343,686 to 343,814 _02578 BACOVA_02579: BACOVA_02579 - hypothetical protein, at 343,935 to 344,141 _02579 BACOVA_02580: BACOVA_02580 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 344,205 to 345,476 _02580 Position (kb) 343 344Strain fitness (log2 ratio) -3 -2 -1 0 1at 342.143 kb on + strand, within BACOVA_02573at 342.144 kb on - strand, within BACOVA_02573at 342.145 kb on + strand, within BACOVA_02573at 342.145 kb on + strand, within BACOVA_02573at 342.145 kb on + strand, within BACOVA_02573at 342.190 kb on - strand, within BACOVA_02573at 342.191 kb on + strand, within BACOVA_02573at 342.191 kb on + strand, within BACOVA_02573at 342.230 kb on - strand, within BACOVA_02573at 342.230 kb on - strand, within BACOVA_02573at 342.230 kb on - strand, within BACOVA_02573at 342.233 kb on + strand, within BACOVA_02573at 342.234 kb on - strand, within BACOVA_02573at 342.292 kb on + strand, within BACOVA_02573at 342.293 kb on - strand, within BACOVA_02573at 342.335 kb on + strand, within BACOVA_02573at 342.336 kb on - strand, within BACOVA_02573at 342.344 kb on - strand, within BACOVA_02573at 342.355 kb on - strand, within BACOVA_02573at 342.355 kb on - strand, within BACOVA_02573at 342.367 kb on - strand, within BACOVA_02573at 342.389 kb on + strand, within BACOVA_02573at 342.390 kb on - strand, within BACOVA_02573at 342.414 kb on + strand, within BACOVA_02573at 342.417 kb on - strand, within BACOVA_02573at 342.419 kb on - strand, within BACOVA_02573at 342.419 kb on - strand, within BACOVA_02573at 342.450 kb on + strandat 342.456 kb on + strandat 342.489 kb on - strandat 342.491 kb on + strandat 342.492 kb on - strandat 342.537 kb on - strand, within BACOVA_02574at 342.539 kb on + strand, within BACOVA_02574at 342.548 kb on - strand, within BACOVA_02574at 342.572 kb on - strand, within BACOVA_02574at 342.625 kb on - strand, within BACOVA_02574at 342.678 kb on - strand, within BACOVA_02574at 342.730 kb on - strand, within BACOVA_02574at 342.730 kb on - strand, within BACOVA_02574at 342.772 kb on + strandat 342.784 kb on - strandat 342.849 kb on + strandat 342.877 kb on + strandat 342.877 kb on + strandat 342.877 kb on + strandat 342.884 kb on - strandat 342.884 kb on - strandat 342.924 kb on - strandat 342.948 kb on - strandat 342.954 kb on - strandat 342.959 kb on - strandat 342.962 kb on + strandat 342.963 kb on - strandat 342.980 kb on - strandat 342.982 kb on + strandat 342.988 kb on + strandat 342.989 kb on - strandat 342.989 kb on - strandat 343.118 kb on - strandat 343.120 kb on + strandat 343.120 kb on + strandat 343.439 kb on + strand, within BACOVA_02577at 343.656 kb on + strandat 343.657 kb on - strandat 343.657 kb on - strandat 343.784 kb on + strand, within BACOVA_02578at 343.784 kb on + strand, within BACOVA_02578at 343.789 kb on + strand, within BACOVA_02578at 343.804 kb on - strandat 343.815 kb on - strandat 343.841 kb on - strandat 343.847 kb on - strandat 343.872 kb on + strandat 343.894 kb on + strandat 343.895 kb on - strandat 344.072 kb on + strand, within BACOVA_02579at 344.073 kb on - strand, within BACOVA_02579at 344.115 kb on - strand, within BACOVA_02579at 344.129 kb on + strandat 344.130 kb on - strandat 344.132 kb on + strandat 344.139 kb on + strandat 344.140 kb on - strandat 344.153 kb on - strandat 344.164 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Galactan from Potato 2.5 mg/mL (C)
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342,143 + BACOVA_02573 0.32 -0.4
342,144 - BACOVA_02573 0.32 -0.4
342,145 + BACOVA_02573 0.32 +0.1
342,145 + BACOVA_02573 0.32 -1.0
342,145 + BACOVA_02573 0.32 +0.5
342,190 - BACOVA_02573 0.41 -0.2
342,191 + BACOVA_02573 0.41 -0.2
342,191 + BACOVA_02573 0.41 -0.2
342,230 - BACOVA_02573 0.49 +0.0
342,230 - BACOVA_02573 0.49 +0.4
342,230 - BACOVA_02573 0.49 -0.0
342,233 + BACOVA_02573 0.49 -1.5
342,234 - BACOVA_02573 0.49 +0.2
342,292 + BACOVA_02573 0.61 +0.5
342,293 - BACOVA_02573 0.61 -0.7
342,335 + BACOVA_02573 0.69 -0.2
342,336 - BACOVA_02573 0.69 -2.0
342,344 - BACOVA_02573 0.71 +0.0
342,355 - BACOVA_02573 0.73 +0.7
342,355 - BACOVA_02573 0.73 -0.0
342,367 - BACOVA_02573 0.75 -0.0
342,389 + BACOVA_02573 0.80 -0.6
342,390 - BACOVA_02573 0.80 -1.0
342,414 + BACOVA_02573 0.85 +0.4
342,417 - BACOVA_02573 0.85 +0.1
342,419 - BACOVA_02573 0.86 +0.1
342,419 - BACOVA_02573 0.86 +1.7
342,450 + -1.9
342,456 + -1.4
342,489 - +0.2
342,491 + -0.1
342,492 - -1.4
342,537 - BACOVA_02574 0.11 +0.4
342,539 + BACOVA_02574 0.11 -0.7
342,548 - BACOVA_02574 0.14 -0.7
342,572 - BACOVA_02574 0.23 +0.5
342,625 - BACOVA_02574 0.40 +1.0
342,678 - BACOVA_02574 0.58 +0.2
342,730 - BACOVA_02574 0.76 -0.9
342,730 - BACOVA_02574 0.76 -0.9
342,772 + +1.1
342,784 - +0.7
342,849 + -0.6
342,877 + +0.5
342,877 + -1.0
342,877 + -1.0
342,884 - +1.1
342,884 - -2.9
342,924 - -0.7
342,948 - +0.0
342,954 - -0.6
342,959 - -2.3
342,962 + -1.5
342,963 - -1.7
342,980 - +0.6
342,982 + +0.4
342,988 + -0.4
342,989 - +0.8
342,989 - -3.3
343,118 - +0.9
343,120 + -0.0
343,120 + +0.5
343,439 + BACOVA_02577 0.49 -1.6
343,656 + +0.4
343,657 - -0.4
343,657 - +1.0
343,784 + BACOVA_02578 0.76 -0.9
343,784 + BACOVA_02578 0.76 -1.0
343,789 + BACOVA_02578 0.80 -0.5
343,804 - -0.4
343,815 - +0.2
343,841 - +0.7
343,847 - -0.9
343,872 + -0.5
343,894 + -3.0
343,895 - +0.4
344,072 + BACOVA_02579 0.66 -0.7
344,073 - BACOVA_02579 0.67 -0.7
344,115 - BACOVA_02579 0.87 +0.1
344,129 + -0.1
344,130 - -0.0
344,132 + +0.6
344,139 + -0.5
344,140 - +0.1
344,153 - -1.0
344,164 + -0.4

Or see this region's nucleotide sequence