Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF908

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
637,811	+		GFF907	0.66	-0.3
637,811	+		GFF907	0.66	+0.4
637,811	+		GFF907	0.66	+0.2
637,811	+		GFF907	0.66	+0.5
637,812	-		GFF907	0.66	+0.2
637,812	-		GFF907	0.66	-1.7
637,891	+		GFF907	0.71	+0.6
637,892	-		GFF907	0.71	+0.1
637,892	-		GFF907	0.71	-0.0
638,096	+		GFF907	0.83	-0.7
638,096	+		GFF907	0.83	-0.9
638,193	+		GFF907	0.89	-0.7
638,194	-		GFF907	0.89	-0.7
638,334	+				-0.5
638,569	+		GFF908	0.24	-0.3
638,599	-		GFF908	0.30	-0.7
638,755	-		GFF908	0.58	+0.5
638,818	-		GFF908	0.69	-0.2
638,853	+		GFF908	0.75	+0.1
638,854	-		GFF908	0.75	-0.1
638,973	+				+0.1
638,973	+				+0.7
638,973	+				-0.8
638,973	+				-0.2
638,974	-				-0.2
638,974	-				+0.5
638,974	-				+0.1
639,065	+				-0.1
639,066	-				-0.1
639,140	+				-0.1
639,141	-				-0.3
639,141	-				-0.8
639,147	-				-0.2
639,397	+				+0.0
639,407	-				+0.1
639,661	+		GFF909	0.23	-0.2
639,662	-		GFF909	0.23	+0.4
639,662	-		GFF909	0.23	+0.3