Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5023

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
2,036,746	+		GFF5021	0.40	-0.3
2,036,746	+		GFF5021	0.40	+0.4
2,037,178	+		GFF5021	0.87	-0.1
2,037,178	+		GFF5021	0.87	-0.4
2,037,178	+		GFF5021	0.87	-0.7
2,037,178	+		GFF5021	0.87	-0.0
2,037,178	+		GFF5021	0.87	-1.2
2,037,178	+		GFF5021	0.87	+0.1
2,037,178	+		GFF5021	0.87	-0.5
2,037,178	+		GFF5021	0.87	+0.8
2,037,178	+		GFF5021	0.87	-0.4
2,037,179	-		GFF5021	0.87	+0.8
2,037,179	-		GFF5021	0.87	-0.7
2,037,268	-				-0.1
2,037,268	-				-1.3
2,037,268	-				-0.2
2,037,291	+				+0.0
2,037,292	-				-0.1
2,037,292	-				+0.3
2,037,372	+		GFF5022	0.24	-0.1
2,037,408	+		GFF5022	0.31	+0.2
2,037,432	+		GFF5022	0.37	+0.4
2,037,432	+		GFF5022	0.37	-0.7
2,037,433	-		GFF5022	0.37	-0.5
2,037,582	+		GFF5022	0.68	-0.9
2,038,176	+		GFF5023	0.42	-0.1
2,038,177	-		GFF5023	0.42	-2.1
2,038,177	-		GFF5023	0.42	-0.3
2,038,177	-		GFF5023	0.42	+0.1
2,038,390	-		GFF5023	0.63	+0.8
2,038,390	-		GFF5023	0.63	-0.0
2,038,390	-		GFF5023	0.63	-0.5
2,038,525	-		GFF5023	0.76	-0.7
2,038,578	+		GFF5023	0.82	+0.0
2,038,650	+		GFF5023	0.89	-0.4
2,039,183	+		GFF5024	0.41	-1.1
2,039,184	-		GFF5024	0.41	-1.3
2,039,184	-		GFF5024	0.41	+0.8
2,039,225	+		GFF5024	0.45	+0.8
2,039,225	+		GFF5024	0.45	-0.1
2,039,226	-		GFF5024	0.45	-0.1
2,039,270	+		GFF5024	0.49	-0.2
2,039,270	+		GFF5024	0.49	+0.5
2,039,270	+		GFF5024	0.49	-0.2
2,039,271	-		GFF5024	0.49	+0.0
2,039,271	-		GFF5024	0.49	-0.6
2,039,300	+		GFF5024	0.52	-0.2
2,039,301	-		GFF5024	0.52	+0.2
2,039,301	-		GFF5024	0.52	-0.3
2,039,423	+		GFF5024	0.64	+0.0
2,039,475	-		GFF5024	0.69	-0.8
2,039,475	-		GFF5024	0.69	+0.0