Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4875

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
1,881,858	+		GFF4874	0.10	-2.1
1,881,859	-		GFF4874	0.11	-0.7
1,882,213	-		GFF4874	0.43	-1.2
1,882,653	+		GFF4874	0.83	-0.6
1,882,653	+		GFF4874	0.83	-0.5
1,882,653	+		GFF4874	0.83	-0.9
1,882,653	+		GFF4874	0.83	-0.6
1,882,654	-		GFF4874	0.83	-0.4
1,882,654	-		GFF4874	0.83	-0.2
1,882,654	-		GFF4874	0.83	-0.9
1,882,659	+		GFF4874	0.83	-1.0
1,882,659	+		GFF4874	0.83	+0.6
1,882,659	+		GFF4874	0.83	-0.7
1,882,660	-		GFF4874	0.84	+0.5
1,882,660	-		GFF4874	0.84	-0.6
1,882,660	-		GFF4874	0.84	+1.4
1,882,660	-		GFF4874	0.84	-0.5
1,882,660	-		GFF4874	0.84	-1.0
1,882,660	-		GFF4874	0.84	-1.0
1,882,660	-		GFF4874	0.84	-2.1
1,882,725	+		GFF4874	0.89	-0.9
1,882,725	+		GFF4874	0.89	-0.3
1,882,725	+		GFF4874	0.89	-0.6
1,882,821	+				-0.8
1,882,821	+				-1.1
1,882,822	-				-2.5
1,882,822	-				-0.4