Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2191

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
1,079,593	+		GFF2189	0.40	-0.5
1,079,593	+		GFF2189	0.40	+0.3
1,079,593	+		GFF2189	0.40	-1.1
1,079,593	+		GFF2189	0.40	-0.2
1,079,593	+		GFF2189	0.40	-0.6
1,079,792	+				+0.3
1,079,792	+				+0.2
1,079,792	+				+0.1
1,079,792	+				-0.6
1,079,792	+				+1.6
1,079,792	+				+0.2
1,079,793	-				+0.8
1,079,815	+				+0.1
1,079,815	+				-1.0
1,079,988	+		GFF2190	0.48	-0.5
1,079,994	+		GFF2190	0.50	+0.4
1,079,994	+		GFF2190	0.50	+0.5
1,079,995	-		GFF2190	0.51	+0.9
1,079,995	-		GFF2190	0.51	-0.2
1,080,099	+				+0.1
1,080,099	+				+0.2
1,080,100	-				-0.0
1,080,103	+				+0.1
1,080,104	-				+0.1
1,080,200	+				-0.8
1,080,200	+				+0.7
1,080,200	+				-1.0
1,080,200	+				-0.0
1,080,200	+				-0.6
1,080,200	+				+0.1
1,080,200	+				+0.6
1,080,201	-				+0.1
1,080,201	-				+1.0
1,080,201	-				+0.7
1,080,201	-				-0.3
1,080,201	-				+0.8
1,080,225	+				-0.6
1,080,226	-				+0.2
1,080,338	-				-0.9
1,081,121	+		GFF2191	0.70	-1.8
1,081,121	+		GFF2191	0.70	+1.1
1,081,122	-		GFF2191	0.70	-0.7
1,081,187	+		GFF2191	0.76	+0.3
1,081,340	+		GFF2191	0.90	-0.6
1,081,340	+		GFF2191	0.90	-0.9
1,081,340	+		GFF2191	0.90	+0.4
1,081,340	+		GFF2191	0.90	+0.6
1,081,340	+		GFF2191	0.90	-0.5
1,081,341	-		GFF2191	0.90	-0.7
1,081,341	-		GFF2191	0.90	+0.1
1,081,341	-		GFF2191	0.90	-0.3
1,081,341	-		GFF2191	0.90	-0.1
1,081,341	-		GFF2191	0.90	-0.6
1,081,525	+				+0.8
1,081,526	-				+0.2
1,081,526	-				+0.6
1,081,526	-				-0.8
1,082,101	+		GFF2192	0.67	+0.2
1,082,101	+		GFF2192	0.67	+0.3
1,082,101	+		GFF2192	0.67	+0.0
1,082,101	+		GFF2192	0.67	+0.2
1,082,102	-		GFF2192	0.67	+0.5
1,082,102	-		GFF2192	0.67	+0.1
1,082,102	-		GFF2192	0.67	-0.0
1,082,102	-		GFF2192	0.67	-0.7
1,082,210	-		GFF2192	0.78	+0.1
1,082,210	-		GFF2192	0.78	-1.0
1,082,221	+		GFF2192	0.79	+0.0
1,082,221	+		GFF2192	0.79	-0.0
1,082,221	+		GFF2192	0.79	-0.3
1,082,222	-		GFF2192	0.79	+0.1
1,082,222	-		GFF2192	0.79	-0.8
1,082,222	-		GFF2192	0.79	-0.3
1,082,222	-		GFF2192	0.79	-0.8
1,082,222	-		GFF2192	0.79	+0.0