Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1145

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
1,151	-		GFF1144	0.35	-0.1
1,963	-				-0.1
2,137	-		GFF1145	0.13	+0.3
2,313	+		GFF1145	0.23	+0.7
2,394	+		GFF1145	0.28	+0.1
3,243	+		GFF1145	0.80	-1.6
3,393	+		GFF1145	0.89	+0.3
3,409	-		GFF1145	0.90	+0.3
3,477	+				+0.2
3,882	-		GFF1146	0.77	-0.7
3,998	+				+1.1
4,011	-				+0.5
4,222	-		GFF1147	0.50	+0.6
4,420	-				+0.4
4,423	-				-0.1