Strain Fitness in Escherichia fergusonii Becca around EFB2_04837

Experiment: BHIS_CaCl2 no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community
5,088,385	+		EFB2_04836	0.73	+0.4
5,088,385	+		EFB2_04836	0.73	+0.4
5,088,385	+		EFB2_04836	0.73	-0.8
5,088,385	+		EFB2_04836	0.73	+0.6
5,088,386	-		EFB2_04836	0.74	-0.1
5,088,386	-		EFB2_04836	0.74	+0.8
5,088,386	-		EFB2_04836	0.74	+0.1
5,088,386	-		EFB2_04836	0.74	-0.2
5,088,590	-				+0.2
5,088,590	-				+0.5
5,088,590	-				-2.5
5,088,590	-				-1.9
5,088,595	+				+0.4
5,088,595	+				+1.7
5,088,595	+				+0.3
5,088,596	-				-0.8
5,088,675	-				+0.2
5,088,699	+				+0.9
5,088,700	+				-0.4
5,088,700	+				-0.9
5,088,700	+				+0.1
5,088,700	+				+0.8
5,088,700	+				+1.9
5,088,700	+				+0.4
5,088,700	+				+0.6
5,088,700	+				-0.2
5,088,700	+				+1.1
5,088,701	-				+0.3
5,088,701	-				+0.2
5,088,701	-				+0.5
5,088,701	-				+0.2
5,088,701	-				+0.0
5,088,745	+				+0.7
5,088,745	+				+0.4
5,088,745	+				+0.5
5,088,745	+				-1.2
5,088,745	+				+0.4
5,088,745	+				-1.4
5,088,745	+				-2.4
5,088,745	+				-2.4
5,088,745	+				+0.6
5,088,746	-				+1.7
5,088,746	-				+1.7
5,088,746	-				-0.3
5,088,746	-				+0.0
5,088,747	+				+1.3
5,088,747	+				+2.3
5,088,747	+				-0.2
5,088,747	+				+0.1
5,088,748	-				-1.0
5,088,749	+				-1.3
5,088,749	+				-0.3
5,088,749	+				+1.9
5,088,750	-				-0.5
5,088,750	-				-1.8
5,088,750	-				-0.1
5,088,750	-				+0.5
5,088,767	+				-0.8
5,088,767	+				-0.7
5,088,767	+				+0.1
5,088,768	-				-0.3
5,088,768	-				+0.4
5,088,770	+				+1.1
5,088,771	-				-0.5
5,088,784	+				-2.0
5,088,797	+				-0.8
5,088,797	+				+0.2
5,088,797	+				-0.5
5,088,797	+				-1.1
5,088,797	+				-1.7
5,088,797	+				-1.7
5,088,797	+				-0.3
5,088,797	+				-2.8
5,088,797	+				-0.6
5,088,798	-				+0.0
5,088,798	-				+1.5
5,088,798	-				-1.6
5,088,798	-				-0.2
5,088,798	-				-3.4
5,088,798	-				-0.7
5,088,798	-				-0.9
5,088,798	-				-2.0
5,088,798	-				-1.3
5,088,798	-				-0.6
5,088,798	-				-1.1
5,088,853	+				-3.9
5,088,853	+				-3.4
5,088,854	-				+1.4
5,088,854	-				-0.2
5,088,854	-				-0.1
5,088,854	-				-0.3
5,088,854	-				-0.2
5,088,854	-				-1.1
5,088,854	-				-0.8
5,088,887	-				-3.2
5,088,887	-				-0.1
5,088,914	-				-2.5
5,088,923	+				+0.3
5,088,934	+				-2.2
5,088,934	+				-0.9
5,088,934	+				-0.5
5,088,934	+				-4.5
5,088,934	+				-1.3
5,088,934	+				-2.1
5,088,934	+				+0.6
5,088,934	+				-0.7
5,088,935	-				-0.3
5,088,935	-				-0.7
5,088,935	-				-0.6
5,088,935	-				+0.5
5,088,954	+				-0.9
5,088,962	+				-2.0
5,088,962	+				-1.8
5,088,962	+				-0.1
5,088,963	-				+0.2
5,088,966	-				-0.4
5,088,966	-				-3.7
5,088,988	-				+0.6
5,088,988	-				+0.1
5,088,988	-				-1.4
5,088,997	+				-1.3
5,089,008	-				-0.9
5,089,008	-				+0.3
5,089,014	+				+0.3
5,089,015	-				-0.1
5,089,015	-				-0.4
5,089,015	-				-0.5
5,089,032	+				-1.0
5,089,032	+				+0.4
5,089,032	+				-0.5
5,089,047	-				+0.3
5,089,047	-				+1.0
5,089,047	-				+1.5
5,089,062	+				+0.4
5,089,062	+				-0.4
5,089,084	-				+1.2
5,089,084	-				-0.7
5,089,089	+				-0.4
5,089,089	+				-0.8
5,089,089	+				-1.3
5,089,089	+				+1.0
5,089,089	+				-0.2
5,089,090	-				-0.8
5,089,090	-				+1.3
5,089,090	-				-0.7
5,089,090	-				-0.1
5,089,090	-				+0.5
5,089,090	-				+0.1
5,089,090	-				-0.8
5,089,090	-				-0.0
5,089,090	-				-2.8
5,089,090	-				-0.8
5,089,090	-				-0.7
5,089,090	-				-1.5
5,089,090	-				+0.7
5,089,090	-				+0.2
5,089,090	-				+0.9
5,089,090	-				-1.1
5,089,091	+				-2.2
5,089,091	+				-1.8
5,089,091	+				+0.5
5,089,091	+				+1.4
5,089,091	+				-0.0
5,089,091	+				-0.1
5,089,091	+				-0.1
5,089,091	+				+0.4
5,089,091	+				+0.4
5,089,091	+				+1.1
5,089,091	+				+0.1
5,089,092	-				-0.8
5,089,092	-				-1.0
5,089,092	-				+0.0
5,089,092	-				+0.0
5,089,092	-				-3.5
5,089,092	-				+0.2
5,089,092	-				-0.6
5,089,092	-				-0.2
5,089,092	-				+0.1
5,089,092	-				-0.4
5,089,092	-				-0.9
5,089,092	-				-1.3
5,089,092	-				+0.9
5,089,092	-				-0.5
5,089,092	-				-0.9
5,089,092	-				-0.1
5,089,092	-				+1.3
5,089,092	-				+0.2
5,089,092	-				+1.1
5,089,092	-				+2.0
5,089,092	-				+0.4
5,089,093	+				+0.4
5,089,093	+				+1.2
5,089,093	+				+0.2
5,089,093	+				-0.4
5,089,093	+				+1.0
5,089,093	+				-2.2
5,089,094	-				-2.4
5,089,094	-				-0.6
5,089,094	-				-2.7
5,089,094	-				-0.8
5,089,094	-				+0.2
5,089,094	-				-0.9
5,089,094	-				+0.2
5,089,095	+				+0.8
5,089,095	+				-0.0
5,089,096	-				-1.6
5,089,121	-				-0.2
5,089,123	+				-3.0
5,089,128	+				-0.3
5,089,128	+				+1.3
5,089,128	+				+0.2
5,089,128	+				-0.1
5,089,128	+				-0.2
5,089,129	-				+0.2
5,089,129	-				+0.1
5,089,129	-				+0.7
5,089,130	+				-0.9
5,089,130	+				-4.2
5,089,131	-				-1.0
5,089,131	-				+0.3
5,089,131	-				+0.4
5,089,133	-				-2.7
5,089,133	-				-0.8
5,089,135	+				-0.1
5,089,135	+				+0.2
5,089,135	+				+0.3
5,089,136	-				-0.7
5,089,136	-				+0.5
5,089,167	-				+0.1
5,089,178	+				-1.0
5,089,179	-				+0.3
5,089,180	+				+0.3
5,089,194	+				+0.4
5,089,194	+				+1.1
5,089,194	+				+0.2
5,089,194	+				+0.5
5,089,195	-				-3.1
5,089,195	-				-3.2
5,089,198	+				-3.6
5,089,198	+				-0.6
5,089,198	+				-1.9
5,089,198	+				+1.0
5,089,198	+				+0.7
5,089,198	+				+0.2
5,089,198	+				+2.0
5,089,199	-				+0.4
5,089,199	-				+0.3
5,089,199	-				+0.0
5,089,199	-				+0.4
5,089,199	-				-0.4
5,089,199	-				-0.8
5,089,199	-				+0.9
5,089,199	-				-1.0
5,089,199	-				+2.3
5,089,264	+				-0.5
5,089,265	-				-1.2
5,089,265	-				-0.5
5,089,286	-				-0.9
5,089,288	+				-0.9
5,089,288	+				+0.2
5,089,288	+				+0.3
5,089,288	+				-0.5
5,089,288	+				-0.7
5,089,289	-				-0.1
5,089,289	-				+0.0
5,089,289	-				-0.2
5,089,289	-				+1.1
5,089,293	-				+0.3
5,089,293	-				+1.0
5,089,327	+				+0.2
5,089,328	-				-0.2
5,089,337	+				-1.1
5,089,338	-				+0.7
5,089,338	-				-0.1
5,089,338	-				+0.2
5,089,341	+				-0.0
5,089,341	+				+0.5
5,089,341	+				-0.7
5,089,341	+				+0.6
5,089,341	+				+0.9
5,089,342	-				-0.4
5,089,342	-				+1.1
5,089,342	-				-1.0
5,089,342	-				-3.3
5,089,342	-				-1.2
5,089,342	-				-1.4
5,089,342	-				-1.9
5,089,342	-				+0.4
5,089,442	+				+1.2
5,089,442	+				-1.0
5,089,443	-				+0.3
5,089,443	-				-1.0
5,089,443	-				-1.3
5,089,458	+				+0.5
5,089,458	+				-0.3
5,089,459	-				+2.1
5,089,459	-				+0.5
5,089,498	+				-2.8
5,089,516	+				+0.4
5,089,517	-				-1.3
5,089,540	-				+0.9
5,089,713	+		EFB2_04837	0.20	+2.6
5,089,719	+		EFB2_04837	0.20	-1.0
5,089,719	+		EFB2_04837	0.20	+2.3
5,089,719	+		EFB2_04837	0.20	-0.5
5,089,719	+		EFB2_04837	0.20	+0.2
5,089,719	+		EFB2_04837	0.20	-1.1
5,089,720	-		EFB2_04837	0.20	-1.1
5,089,720	-		EFB2_04837	0.20	-1.3
5,089,720	-		EFB2_04837	0.20	+1.5
5,089,720	-		EFB2_04837	0.20	+0.4
5,089,720	-		EFB2_04837	0.20	+0.0
5,089,729	-		EFB2_04837	0.21	+0.4
5,089,729	-		EFB2_04837	0.21	+0.8
5,089,729	-		EFB2_04837	0.21	+1.2
5,089,729	-		EFB2_04837	0.21	-1.7
5,089,822	+		EFB2_04837	0.27	+0.2
5,089,822	+		EFB2_04837	0.27	+1.3
5,089,822	+		EFB2_04837	0.27	-0.2
5,089,822	+		EFB2_04837	0.27	+0.7
5,089,822	+		EFB2_04837	0.27	-1.8
5,089,822	+		EFB2_04837	0.27	+0.2
5,089,822	+		EFB2_04837	0.27	-0.0
5,089,822	+		EFB2_04837	0.27	+0.2
5,089,822	+		EFB2_04837	0.27	-0.0
5,089,822	+		EFB2_04837	0.27	+0.3
5,089,822	+		EFB2_04837	0.27	+2.0
5,089,822	+		EFB2_04837	0.27	-2.4
5,089,822	+		EFB2_04837	0.27	+0.1
5,089,822	+		EFB2_04837	0.27	+0.0
5,089,822	+		EFB2_04837	0.27	+0.5
5,089,822	+		EFB2_04837	0.27	+1.0
5,089,823	-		EFB2_04837	0.27	-0.8
5,089,823	-		EFB2_04837	0.27	+0.1
5,089,823	-		EFB2_04837	0.27	-0.7
5,089,823	-		EFB2_04837	0.27	+0.7
5,089,823	-		EFB2_04837	0.27	+1.5
5,089,823	-		EFB2_04837	0.27	-0.2
5,089,858	+		EFB2_04837	0.29	-0.5
5,089,858	+		EFB2_04837	0.29	+0.2
5,089,858	+		EFB2_04837	0.29	+1.4
5,089,858	+		EFB2_04837	0.29	-0.5
5,089,858	+		EFB2_04837	0.29	+0.3
5,089,859	-		EFB2_04837	0.29	-0.1
5,089,859	-		EFB2_04837	0.29	+2.0
5,089,859	-		EFB2_04837	0.29	-1.7
5,089,921	+		EFB2_04837	0.33	-0.2
5,089,921	+		EFB2_04837	0.33	-1.5
5,089,921	+		EFB2_04837	0.33	-1.2
5,089,921	+		EFB2_04837	0.33	-1.2
5,089,921	+		EFB2_04837	0.33	+0.3
5,089,921	+		EFB2_04837	0.33	+0.8
5,089,921	+		EFB2_04837	0.33	+0.2
5,089,921	+		EFB2_04837	0.33	+0.5
5,089,921	+		EFB2_04837	0.33	+0.8
5,089,921	+		EFB2_04837	0.33	+0.3
5,089,921	+		EFB2_04837	0.33	-1.8
5,089,921	+		EFB2_04837	0.33	+0.7
5,089,921	+		EFB2_04837	0.33	+0.8
5,089,921	+		EFB2_04837	0.33	+1.0
5,089,921	+		EFB2_04837	0.33	+0.8
5,089,921	+		EFB2_04837	0.33	+2.0
5,089,921	+		EFB2_04837	0.33	+0.5
5,089,922	-		EFB2_04837	0.33	-1.1
5,089,922	-		EFB2_04837	0.33	-1.1
5,089,922	-		EFB2_04837	0.33	-0.6
5,089,922	-		EFB2_04837	0.33	-2.5
5,089,922	-		EFB2_04837	0.33	-1.6
5,089,922	-		EFB2_04837	0.33	-3.4
5,089,922	-		EFB2_04837	0.33	+0.4
5,089,922	-		EFB2_04837	0.33	+1.2
5,089,922	-		EFB2_04837	0.33	+0.2
5,089,922	-		EFB2_04837	0.33	+0.1
5,089,922	-		EFB2_04837	0.33	-1.3
5,089,922	-		EFB2_04837	0.33	-1.3
5,089,922	-		EFB2_04837	0.33	-1.2
5,089,922	-		EFB2_04837	0.33	-0.7
5,089,950	+		EFB2_04837	0.34	-0.6
5,089,950	+		EFB2_04837	0.34	+0.4
5,089,950	+		EFB2_04837	0.34	+0.1
5,089,950	+		EFB2_04837	0.34	+0.5
5,089,951	-		EFB2_04837	0.34	-1.8
5,089,951	-		EFB2_04837	0.34	-0.7
5,089,951	-		EFB2_04837	0.34	+0.7
5,090,011	-		EFB2_04837	0.38	+0.3
5,090,025	+		EFB2_04837	0.39	+0.4
5,090,025	+		EFB2_04837	0.39	+0.8
5,090,025	+		EFB2_04837	0.39	+0.3
5,090,025	+		EFB2_04837	0.39	+1.5
5,090,025	+		EFB2_04837	0.39	+1.0
5,090,026	-		EFB2_04837	0.39	+0.3
5,090,026	-		EFB2_04837	0.39	-0.7
5,090,026	-		EFB2_04837	0.39	-0.1
5,090,029	+		EFB2_04837	0.39	-0.1
5,090,029	+		EFB2_04837	0.39	-1.7
5,090,029	+		EFB2_04837	0.39	+0.1
5,090,029	+		EFB2_04837	0.39	+0.3
5,090,029	+		EFB2_04837	0.39	+0.5
5,090,029	+		EFB2_04837	0.39	+0.5
5,090,029	+		EFB2_04837	0.39	+2.2
5,090,029	+		EFB2_04837	0.39	+0.1
5,090,029	+		EFB2_04837	0.39	-0.0
5,090,029	+		EFB2_04837	0.39	+0.2
5,090,029	+		EFB2_04837	0.39	-0.9
5,090,029	+		EFB2_04837	0.39	+0.4
5,090,029	+		EFB2_04837	0.39	+1.0
5,090,029	+		EFB2_04837	0.39	-0.1
5,090,029	+		EFB2_04837	0.39	+0.9
5,090,029	+		EFB2_04837	0.39	+0.6
5,090,029	+		EFB2_04837	0.39	+0.4
5,090,029	+		EFB2_04837	0.39	-0.1
5,090,029	+		EFB2_04837	0.39	-0.4
5,090,029	+		EFB2_04837	0.39	+1.9
5,090,029	+		EFB2_04837	0.39	+0.2
5,090,029	+		EFB2_04837	0.39	+0.8
5,090,029	+		EFB2_04837	0.39	-1.5
5,090,029	+		EFB2_04837	0.39	+0.0
5,090,029	+		EFB2_04837	0.39	-0.0
5,090,029	+		EFB2_04837	0.39	-0.3
5,090,029	+		EFB2_04837	0.39	-0.7
5,090,029	+		EFB2_04837	0.39	-0.9
5,090,029	+		EFB2_04837	0.39	-0.1
5,090,029	+		EFB2_04837	0.39	+0.6
5,090,029	+		EFB2_04837	0.39	-0.5
5,090,029	+		EFB2_04837	0.39	+0.1
5,090,029	+		EFB2_04837	0.39	+0.0
5,090,029	+		EFB2_04837	0.39	-1.5
5,090,029	+		EFB2_04837	0.39	+1.8
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5,091,861	+		EFB2_04838	0.59	-0.2
5,091,862	-		EFB2_04838	0.59	+0.6
5,091,862	-		EFB2_04838	0.59	-0.5
5,091,862	-		EFB2_04838	0.59	+0.7
5,091,862	-		EFB2_04838	0.59	+1.0
5,091,863	+		EFB2_04838	0.60	-2.7
5,091,863	+		EFB2_04838	0.60	+0.0
5,091,863	+		EFB2_04838	0.60	+1.1
5,091,864	-		EFB2_04838	0.60	+1.2
5,091,864	-		EFB2_04838	0.60	-0.3
5,091,864	-		EFB2_04838	0.60	-1.6
5,091,912	+		EFB2_04838	0.64	+0.8
5,091,912	+		EFB2_04838	0.64	-2.4
5,091,912	+		EFB2_04838	0.64	-2.1
5,091,912	+		EFB2_04838	0.64	+1.7
5,091,913	-		EFB2_04838	0.64	-0.4
5,091,913	-		EFB2_04838	0.64	-1.8
5,091,913	-		EFB2_04838	0.64	+0.6
5,091,985	+		EFB2_04838	0.69	-0.2
5,091,985	+		EFB2_04838	0.69	+0.6
5,091,985	+		EFB2_04838	0.69	-0.5
5,091,985	+		EFB2_04838	0.69	+0.4
5,091,986	-		EFB2_04838	0.69	+0.1
5,091,986	-		EFB2_04838	0.69	+0.8
5,091,986	-		EFB2_04838	0.69	-1.3
5,091,986	-		EFB2_04838	0.69	-0.0