Strain Fitness in Escherichia fergusonii Becca around EFB2_03997

Experiment: BHIS_CaCl2 no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community
4,198,134	+		EFB2_03994	0.57	-0.6
4,198,134	+		EFB2_03994	0.57	+1.0
4,198,135	-		EFB2_03994	0.57	-0.6
4,198,177	-		EFB2_03994	0.62	-1.3
4,198,231	-		EFB2_03994	0.68	-0.3
4,198,231	-		EFB2_03994	0.68	+0.7
4,198,231	-		EFB2_03994	0.68	-1.9
4,198,231	-		EFB2_03994	0.68	+1.5
4,198,234	+		EFB2_03994	0.69	-0.5
4,198,234	+		EFB2_03994	0.69	+0.0
4,198,234	+		EFB2_03994	0.69	-1.7
4,198,234	+		EFB2_03994	0.69	+0.4
4,198,234	+		EFB2_03994	0.69	+1.7
4,198,234	+		EFB2_03994	0.69	-1.3
4,198,234	+		EFB2_03994	0.69	+0.0
4,198,234	+		EFB2_03994	0.69	-0.8
4,198,234	+		EFB2_03994	0.69	-1.8
4,198,235	-		EFB2_03994	0.69	-0.6
4,198,235	-		EFB2_03994	0.69	+0.4
4,198,235	-		EFB2_03994	0.69	-1.0
4,198,235	-		EFB2_03994	0.69	+0.0
4,198,235	-		EFB2_03994	0.69	-1.3
4,198,235	-		EFB2_03994	0.69	-2.2
4,198,235	-		EFB2_03994	0.69	-3.3
4,198,312	+		EFB2_03994	0.78	-0.3
4,198,312	+		EFB2_03994	0.78	-1.6
4,198,312	+		EFB2_03994	0.78	-1.3
4,198,312	+		EFB2_03994	0.78	-0.3
4,198,312	+		EFB2_03994	0.78	-1.8
4,198,313	-		EFB2_03994	0.78	-1.7
4,198,313	-		EFB2_03994	0.78	-1.4
4,198,313	-		EFB2_03994	0.78	-0.6
4,198,313	-		EFB2_03994	0.78	-0.3
4,198,356	+		EFB2_03994	0.83	+0.4
4,198,368	+		EFB2_03994	0.84	-1.0
4,198,368	+		EFB2_03994	0.84	+2.0
4,198,369	-		EFB2_03994	0.84	+0.0
4,198,372	+		EFB2_03994	0.85	+0.3
4,198,372	+		EFB2_03994	0.85	-1.1
4,198,373	-		EFB2_03994	0.85	+2.0
4,198,373	-		EFB2_03994	0.85	+2.0
4,198,373	-		EFB2_03994	0.85	-0.6
4,198,373	-		EFB2_03994	0.85	+2.0
4,198,404	+		EFB2_03994	0.89	-2.6
4,198,404	+		EFB2_03994	0.89	-0.3
4,198,404	+		EFB2_03994	0.89	-0.3
4,198,404	+		EFB2_03994	0.89	-0.3
4,198,404	+		EFB2_03994	0.89	-0.8
4,198,404	+		EFB2_03994	0.89	+0.4
4,198,404	+		EFB2_03994	0.89	-1.0
4,198,405	-		EFB2_03994	0.89	+0.4
4,198,405	-		EFB2_03994	0.89	+0.9
4,198,405	-		EFB2_03994	0.89	+2.0
4,198,405	-		EFB2_03994	0.89	-0.3
4,198,405	-		EFB2_03994	0.89	-0.0
4,198,405	-		EFB2_03994	0.89	+1.7
4,198,409	+		EFB2_03994	0.89	+0.0
4,198,431	+				+0.6
4,198,431	+				-1.7
4,198,431	+				-0.6
4,198,431	+				-0.7
4,198,432	-				-1.8
4,198,438	+				+1.2
4,198,438	+				-2.4
4,198,438	+				+0.8
4,198,439	-				-1.7
4,198,439	-				-0.3
4,198,439	-				-1.4
4,198,439	-				-1.0
4,198,464	+				-0.3
4,198,464	+				-2.4
4,198,464	+				+0.3
4,198,464	+				-0.9
4,198,464	+				+0.8
4,198,465	-				-0.6
4,198,470	+				-0.8
4,198,470	+				+0.4
4,198,471	-				-1.1
4,198,471	-				+0.4
4,198,471	-				-0.5
4,198,471	-				-0.3
4,198,498	+				-2.7
4,198,498	+				+0.8
4,198,498	+				+0.3
4,198,514	+				+0.5
4,198,514	+				-0.6
4,198,514	+				-1.8
4,198,515	-				+1.1
4,198,521	+				-1.0
4,198,521	+				-0.3
4,198,521	+				-2.1
4,198,521	+				-1.4
4,198,521	+				-0.8
4,198,522	-				-1.5
4,198,522	-				+0.2
4,198,522	-				-0.3
4,198,522	-				+0.0
4,198,522	-				-1.2
4,198,522	-				-0.3
4,198,522	-				+0.1
4,198,522	-				-1.1
4,198,522	-				+0.8
4,198,532	+		EFB2_03995	0.11	-1.2
4,198,532	+		EFB2_03995	0.11	+1.2
4,198,533	-		EFB2_03995	0.11	+0.6
4,198,621	+		EFB2_03995	0.39	-1.8
4,198,621	+		EFB2_03995	0.39	+0.0
4,198,621	+		EFB2_03995	0.39	-3.5
4,198,621	+		EFB2_03995	0.39	-0.5
4,198,621	+		EFB2_03995	0.39	-0.5
4,198,621	+		EFB2_03995	0.39	-1.0
4,198,621	+		EFB2_03995	0.39	-1.1
4,198,621	+		EFB2_03995	0.39	-1.4
4,198,621	+		EFB2_03995	0.39	-2.1
4,198,621	+		EFB2_03995	0.39	+1.2
4,198,621	+		EFB2_03995	0.39	-0.3
4,198,621	+		EFB2_03995	0.39	-0.1
4,198,622	-		EFB2_03995	0.40	-0.8
4,198,622	-		EFB2_03995	0.40	+0.8
4,198,622	-		EFB2_03995	0.40	+1.0
4,198,622	-		EFB2_03995	0.40	-1.6
4,198,622	-		EFB2_03995	0.40	+0.2
4,198,622	-		EFB2_03995	0.40	+0.6
4,198,622	-		EFB2_03995	0.40	+0.9
4,198,636	-		EFB2_03995	0.44	+0.2
4,198,636	-		EFB2_03995	0.44	+1.5
4,198,636	-		EFB2_03995	0.44	+1.4
4,198,636	-		EFB2_03995	0.44	+0.2
4,198,636	-		EFB2_03995	0.44	-0.3
4,198,641	+		EFB2_03995	0.46	-0.3
4,198,642	-		EFB2_03995	0.46	-0.9
4,198,683	-		EFB2_03995	0.59	+1.1
4,198,694	+		EFB2_03995	0.63	-0.8
4,198,694	+		EFB2_03995	0.63	+1.1
4,198,694	+		EFB2_03995	0.63	-1.6
4,198,694	+		EFB2_03995	0.63	-1.2
4,198,694	+		EFB2_03995	0.63	+0.8
4,198,694	+		EFB2_03995	0.63	-1.7
4,198,694	+		EFB2_03995	0.63	+2.1
4,198,694	+		EFB2_03995	0.63	+0.7
4,198,694	+		EFB2_03995	0.63	-1.0
4,198,694	+		EFB2_03995	0.63	-2.3
4,198,694	+		EFB2_03995	0.63	-0.0
4,198,694	+		EFB2_03995	0.63	+0.1
4,198,694	+		EFB2_03995	0.63	-1.7
4,198,695	-		EFB2_03995	0.63	+0.8
4,198,695	-		EFB2_03995	0.63	+1.3
4,198,695	-		EFB2_03995	0.63	-1.0
4,198,695	-		EFB2_03995	0.63	-3.3
4,198,695	-		EFB2_03995	0.63	-0.2
4,198,695	-		EFB2_03995	0.63	-1.4
4,198,695	-		EFB2_03995	0.63	+1.4
4,198,695	-		EFB2_03995	0.63	-0.2
4,198,695	-		EFB2_03995	0.63	+0.2
4,198,695	-		EFB2_03995	0.63	+0.8
4,198,695	-		EFB2_03995	0.63	+0.5
4,198,695	-		EFB2_03995	0.63	-2.7
4,198,695	-		EFB2_03995	0.63	-1.1
4,198,695	-		EFB2_03995	0.63	+1.4
4,198,695	-		EFB2_03995	0.63	-3.1
4,198,701	+		EFB2_03995	0.65	-1.0
4,198,701	+		EFB2_03995	0.65	-0.1
4,198,701	+		EFB2_03995	0.65	+0.3
4,198,709	+		EFB2_03995	0.67	+1.0
4,198,710	-		EFB2_03995	0.68	-0.3
4,198,724	+		EFB2_03995	0.72	-0.3
4,198,725	-		EFB2_03995	0.72	-2.5
4,198,736	+		EFB2_03995	0.76	+2.4
4,198,736	+		EFB2_03995	0.76	+1.9
4,198,736	+		EFB2_03995	0.76	-0.1
4,198,737	-		EFB2_03995	0.76	-0.6
4,198,737	-		EFB2_03995	0.76	+0.8
4,198,737	-		EFB2_03995	0.76	+0.9
4,198,748	+		EFB2_03995	0.80	-2.3
4,198,749	-		EFB2_03995	0.80	+0.3
4,198,749	-		EFB2_03995	0.80	+0.9
4,198,749	-		EFB2_03995	0.80	+0.3
4,198,757	+		EFB2_03995	0.83	+0.5
4,198,795	+				+0.5
4,198,795	+				+1.5
4,198,795	+				+0.8
4,198,795	+				-0.8
4,198,795	+				-0.6
4,198,796	-				+1.4
4,198,796	-				+2.3
4,198,797	+				-1.4
4,198,797	+				+1.2
4,198,797	+				-0.1
4,198,798	-				+0.8
4,198,798	-				-0.0
4,198,798	-				+1.2
4,198,802	+				-0.3
4,198,803	-				+1.0
4,198,803	-				+1.2
4,198,803	-				+0.1
4,198,803	-				-1.1
4,198,815	+				+0.8
4,198,815	+				-0.6
4,198,816	-				-0.7
4,198,816	-				-1.6
4,198,879	+		EFB2_03996	0.28	-1.9
4,198,963	+		EFB2_03996	0.64	-2.3
4,198,963	+		EFB2_03996	0.64	+1.9
4,198,963	+		EFB2_03996	0.64	+0.4
4,198,963	+		EFB2_03996	0.64	-1.6
4,198,967	+		EFB2_03996	0.65	-1.1
4,198,967	+		EFB2_03996	0.65	+0.9
4,198,967	+		EFB2_03996	0.65	-1.7
4,198,967	+		EFB2_03996	0.65	+3.2
4,198,967	+		EFB2_03996	0.65	-1.0
4,198,967	+		EFB2_03996	0.65	-0.2
4,198,967	+		EFB2_03996	0.65	+2.4
4,198,967	+		EFB2_03996	0.65	-1.8
4,199,063	+				+0.8
4,199,064	-				-2.4
4,199,070	+				-1.1
4,199,071	-				+2.0
4,199,071	-				-3.2
4,199,071	-				+0.0
4,199,072	+				+1.2
4,199,072	+				+0.8
4,199,072	+				-2.2
4,199,072	+				-0.7
4,199,073	-				-0.8
4,199,078	+				+1.1
4,199,078	+				-2.6
4,199,078	+				+0.6
4,199,078	+				+2.9
4,199,079	-				-0.3
4,199,079	-				-0.3
4,199,081	+				+0.5
4,199,081	+				-0.3
4,199,082	-				+1.4
4,199,082	-				+2.5
4,199,082	-				+0.8
4,199,082	-				+0.8
4,199,083	+				-1.6
4,199,084	-				-0.4
4,199,084	-				-0.8
4,199,084	-				-0.0
4,199,084	-				+0.2
4,199,084	-				+0.1
4,199,101	+				-1.8
4,199,102	-				+1.2
4,199,102	-				-0.6
4,199,102	-				-1.1
4,199,121	+				+0.2
4,199,121	+				+0.5
4,199,121	+				+0.0
4,199,121	+				-1.1
4,199,121	+				+0.9
4,199,121	+				+0.3
4,199,121	+				+1.5
4,199,121	+				+0.2
4,199,122	-				-0.1
4,199,122	-				+0.2
4,199,122	-				+0.8
4,199,122	-				-0.6
4,199,122	-				-0.1
4,199,122	-				-0.9
4,199,122	-				+0.7
4,199,122	-				+0.3
4,199,122	-				-1.8
4,199,122	-				-1.5
4,199,124	+				-1.6
4,199,124	+				-0.5
4,199,124	+				-3.1
4,199,124	+				-3.2
4,199,124	+				-0.7
4,199,124	+				-2.0
4,199,124	+				+2.3
4,199,124	+				-2.0
4,199,125	-				+0.3
4,199,125	-				-0.3
4,199,126	+				+0.3
4,199,126	+				-0.3
4,199,126	+				-0.3
4,199,126	+				+1.0
4,199,126	+				+0.3
4,199,127	-				+0.2
4,199,127	-				+0.3
4,199,127	-				+0.8
4,199,127	-				-0.2
4,199,127	-				+1.3
4,199,127	-				+0.9
4,199,127	-				+1.8
4,199,646	-		EFB2_03997	0.87	+0.4
4,199,646	-		EFB2_03997	0.87	-3.1
4,199,646	-		EFB2_03997	0.87	-1.5
4,199,648	-		EFB2_03997	0.87	+1.8
4,199,648	-		EFB2_03997	0.87	-1.0
4,199,648	-		EFB2_03997	0.87	-1.2
4,199,648	-		EFB2_03997	0.87	+0.6
4,199,648	-		EFB2_03997	0.87	-0.2
4,199,648	-		EFB2_03997	0.87	-2.1
4,199,648	-		EFB2_03997	0.87	+1.1
4,199,648	-		EFB2_03997	0.87	+0.7
4,199,648	-		EFB2_03997	0.87	+1.5
4,199,648	-		EFB2_03997	0.87	-1.1
4,199,648	-		EFB2_03997	0.87	-0.2
4,199,648	-		EFB2_03997	0.87	+0.3
4,199,648	-		EFB2_03997	0.87	+0.2
4,199,648	-		EFB2_03997	0.87	-0.1
4,199,648	-		EFB2_03997	0.87	-0.7
4,199,648	-		EFB2_03997	0.87	+2.4
4,199,648	-		EFB2_03997	0.87	+0.7
4,199,648	-		EFB2_03997	0.87	-1.1
4,199,648	-		EFB2_03997	0.87	-2.3
4,199,648	-		EFB2_03997	0.87	-2.0
4,199,648	-		EFB2_03997	0.87	-0.4
4,199,652	-		EFB2_03997	0.88	+0.1
4,199,652	-		EFB2_03997	0.88	+0.3
4,199,652	-		EFB2_03997	0.88	-0.6
4,199,652	-		EFB2_03997	0.88	-0.1
4,199,652	-		EFB2_03997	0.88	-0.6
4,199,652	-		EFB2_03997	0.88	+1.0
4,199,652	-		EFB2_03997	0.88	+1.1
4,199,652	-		EFB2_03997	0.88	+0.0
4,199,652	-		EFB2_03997	0.88	-1.4
4,199,652	-		EFB2_03997	0.88	-2.6
4,199,652	-		EFB2_03997	0.88	+0.8
4,199,652	-		EFB2_03997	0.88	+2.0
4,199,652	-		EFB2_03997	0.88	-0.7
4,199,652	-		EFB2_03997	0.88	+1.0
4,199,659	-		EFB2_03997	0.89	+0.1
4,199,702	+				+0.8
4,199,703	-				+1.5
4,199,704	+				-0.0
4,199,704	+				+0.5
4,199,704	+				-1.2
4,199,749	-				+1.3
4,199,749	-				-0.2
4,199,773	-				-2.4
4,199,779	-				+0.1
4,199,790	+				+2.2
4,199,790	+				-2.0
4,199,791	-				-2.9
4,199,803	-				+0.9
4,199,806	-				-1.4
4,199,806	-				-2.7
4,199,806	-				+0.6
4,199,806	-				-0.6
4,199,806	-				-2.0
4,199,839	+				+1.0
4,199,848	+				-0.5
4,199,848	+				-1.2
4,199,848	+				-0.3
4,199,848	+				+0.5
4,199,848	+				+0.1
4,199,848	+				+0.6
4,199,848	+				-1.3
4,199,848	+				-0.6
4,199,848	+				-1.4
4,199,848	+				-0.7
4,199,849	-				+0.6
4,199,849	-				+1.6
4,199,849	-				-0.4
4,199,849	-				-0.3
4,199,849	-				-1.6
4,199,849	-				+0.6
4,199,849	-				-0.2
4,199,849	-				-0.9
4,199,849	-				+1.7
4,199,891	+				+0.0
4,199,918	-				-0.7
4,199,930	+				-0.5
4,199,930	+				-1.5
4,199,930	+				+0.7
4,199,930	+				+1.1
4,199,931	-				-1.5
4,199,931	-				+0.6
4,199,931	-				+0.4
4,199,931	-				-1.3
4,199,931	-				+3.5
4,199,931	-				+0.6
4,199,931	-				+1.0
4,199,950	+				+0.4
4,199,951	-				+2.9
4,199,952	+				-2.1
4,199,952	+				-0.9
4,199,952	+				-0.6
4,199,953	-				-0.6
4,199,953	-				+2.0
4,199,953	-				+1.5
4,199,953	-				-0.2
4,199,953	-				-0.2
4,199,953	-				-2.1
4,200,013	+		EFB2_03998	0.11	-1.1
4,200,013	+		EFB2_03998	0.11	-3.0
4,200,013	+		EFB2_03998	0.11	-1.0
4,200,014	-		EFB2_03998	0.11	-0.3
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