Strain Fitness in Escherichia fergusonii Becca around EFB2_03395

Experiment: BHIS_CaCl2 no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community
3,544,641	+		EFB2_03394	0.36	-1.2
3,544,641	+		EFB2_03394	0.36	-0.5
3,544,641	+		EFB2_03394	0.36	-1.0
3,544,641	+		EFB2_03394	0.36	+0.6
3,544,641	+		EFB2_03394	0.36	-0.1
3,544,642	-		EFB2_03394	0.36	-0.8
3,544,642	-		EFB2_03394	0.36	+1.0
3,544,642	-		EFB2_03394	0.36	+0.6
3,544,667	+		EFB2_03394	0.38	+0.7
3,544,667	+		EFB2_03394	0.38	+0.3
3,544,667	+		EFB2_03394	0.38	+0.8
3,544,667	+		EFB2_03394	0.38	-0.1
3,544,667	+		EFB2_03394	0.38	+0.5
3,544,667	+		EFB2_03394	0.38	-0.9
3,544,667	+		EFB2_03394	0.38	+1.0
3,544,668	-		EFB2_03394	0.38	-0.7
3,544,668	-		EFB2_03394	0.38	+0.0
3,544,668	-		EFB2_03394	0.38	-0.3
3,544,668	-		EFB2_03394	0.38	+0.6
3,544,668	-		EFB2_03394	0.38	-0.6
3,544,668	-		EFB2_03394	0.38	+1.0
3,544,668	-		EFB2_03394	0.38	-0.6
3,544,668	-		EFB2_03394	0.38	-2.1
3,544,668	-		EFB2_03394	0.38	+0.4
3,544,692	+		EFB2_03394	0.39	+1.8
3,544,693	-		EFB2_03394	0.39	+2.2
3,544,715	+		EFB2_03394	0.41	+0.2
3,544,716	-		EFB2_03394	0.41	-1.1
3,544,791	+		EFB2_03394	0.46	-0.1
3,544,820	+		EFB2_03394	0.48	-2.4
3,544,820	+		EFB2_03394	0.48	-1.1
3,544,821	-		EFB2_03394	0.48	+0.3
3,544,821	-		EFB2_03394	0.48	-0.5
3,544,822	+		EFB2_03394	0.48	-0.2
3,544,822	+		EFB2_03394	0.48	-0.4
3,544,822	+		EFB2_03394	0.48	+1.7
3,544,822	+		EFB2_03394	0.48	-2.1
3,544,823	-		EFB2_03394	0.48	+0.9
3,544,823	-		EFB2_03394	0.48	-0.5
3,544,823	-		EFB2_03394	0.48	+1.7
3,544,823	-		EFB2_03394	0.48	-1.9
3,544,823	-		EFB2_03394	0.48	-0.8
3,544,823	-		EFB2_03394	0.48	-1.0
3,544,823	-		EFB2_03394	0.48	-2.2
3,544,902	+		EFB2_03394	0.53	-2.1
3,544,903	-		EFB2_03394	0.53	-2.3
3,544,903	-		EFB2_03394	0.53	-0.1
3,544,903	-		EFB2_03394	0.53	+2.4
3,544,903	-		EFB2_03394	0.53	+0.0
3,544,974	+		EFB2_03394	0.58	-0.5
3,544,984	-		EFB2_03394	0.59	+0.4
3,544,990	+		EFB2_03394	0.59	-1.4
3,544,990	+		EFB2_03394	0.59	-2.7
3,544,990	+		EFB2_03394	0.59	-2.5
3,544,990	+		EFB2_03394	0.59	-1.1
3,544,990	+		EFB2_03394	0.59	+1.8
3,544,990	+		EFB2_03394	0.59	+0.8
3,544,991	-		EFB2_03394	0.59	-0.4
3,544,991	-		EFB2_03394	0.59	-0.2
3,544,991	-		EFB2_03394	0.59	-0.7
3,544,991	-		EFB2_03394	0.59	+0.7
3,544,991	-		EFB2_03394	0.59	+0.5
3,544,991	-		EFB2_03394	0.59	-0.7
3,544,991	-		EFB2_03394	0.59	+2.9
3,544,992	+		EFB2_03394	0.59	-0.3
3,544,992	+		EFB2_03394	0.59	+1.0
3,544,992	+		EFB2_03394	0.59	+0.9
3,544,993	-		EFB2_03394	0.60	+1.6
3,544,993	-		EFB2_03394	0.60	+1.7
3,545,016	+		EFB2_03394	0.61	+0.8
3,545,017	-		EFB2_03394	0.61	+0.1
3,545,017	-		EFB2_03394	0.61	-1.3
3,545,017	-		EFB2_03394	0.61	+1.8
3,545,026	+		EFB2_03394	0.62	-1.4
3,545,026	+		EFB2_03394	0.62	-3.0
3,545,026	+		EFB2_03394	0.62	-0.2
3,545,026	+		EFB2_03394	0.62	+0.6
3,545,026	+		EFB2_03394	0.62	+0.3
3,545,027	-		EFB2_03394	0.62	+1.3
3,545,027	-		EFB2_03394	0.62	-0.6
3,545,027	-		EFB2_03394	0.62	+0.5
3,545,027	-		EFB2_03394	0.62	+0.1
3,545,028	+		EFB2_03394	0.62	+1.0
3,545,028	+		EFB2_03394	0.62	-0.4
3,545,028	+		EFB2_03394	0.62	+1.1
3,545,028	+		EFB2_03394	0.62	-2.1
3,545,029	-		EFB2_03394	0.62	-0.3
3,545,029	-		EFB2_03394	0.62	-0.5
3,545,029	-		EFB2_03394	0.62	-2.0
3,545,043	+		EFB2_03394	0.63	-1.7
3,545,043	+		EFB2_03394	0.63	+0.7
3,545,043	+		EFB2_03394	0.63	+0.7
3,545,043	+		EFB2_03394	0.63	+0.6
3,545,043	+		EFB2_03394	0.63	-2.0
3,545,043	+		EFB2_03394	0.63	+0.5
3,545,043	+		EFB2_03394	0.63	-0.5
3,545,043	+		EFB2_03394	0.63	+0.0
3,545,043	+		EFB2_03394	0.63	-0.1
3,545,043	+		EFB2_03394	0.63	-0.1
3,545,043	+		EFB2_03394	0.63	-0.0
3,545,043	+		EFB2_03394	0.63	-1.6
3,545,043	+		EFB2_03394	0.63	+0.6
3,545,043	+		EFB2_03394	0.63	-0.6
3,545,043	+		EFB2_03394	0.63	+1.5
3,545,043	+		EFB2_03394	0.63	+0.2
3,545,043	+		EFB2_03394	0.63	+1.6
3,545,044	-		EFB2_03394	0.63	+0.0
3,545,058	+		EFB2_03394	0.64	-2.2
3,545,059	-		EFB2_03394	0.64	-0.2
3,545,073	+		EFB2_03394	0.65	-2.4
3,545,073	+		EFB2_03394	0.65	-0.3
3,545,073	+		EFB2_03394	0.65	+1.2
3,545,073	+		EFB2_03394	0.65	+0.6
3,545,073	+		EFB2_03394	0.65	+1.1
3,545,073	+		EFB2_03394	0.65	+0.4
3,545,073	+		EFB2_03394	0.65	-0.1
3,545,074	-		EFB2_03394	0.65	+0.3
3,545,074	-		EFB2_03394	0.65	-1.5
3,545,074	-		EFB2_03394	0.65	-1.0
3,545,074	-		EFB2_03394	0.65	+1.0
3,545,074	-		EFB2_03394	0.65	-2.3
3,545,124	+		EFB2_03394	0.68	-1.3
3,545,124	+		EFB2_03394	0.68	-0.6
3,545,124	+		EFB2_03394	0.68	+1.3
3,545,125	-		EFB2_03394	0.68	-1.3
3,545,125	-		EFB2_03394	0.68	-2.6
3,545,125	-		EFB2_03394	0.68	+3.3
3,545,125	-		EFB2_03394	0.68	-2.6
3,545,131	-		EFB2_03394	0.69	+0.8
3,545,201	+		EFB2_03394	0.74	+0.4
3,545,202	-		EFB2_03394	0.74	-0.2
3,545,224	+		EFB2_03394	0.75	-0.7
3,545,224	+		EFB2_03394	0.75	-1.1
3,545,224	+		EFB2_03394	0.75	+1.2
3,545,224	+		EFB2_03394	0.75	+0.6
3,545,224	+		EFB2_03394	0.75	+0.4
3,545,224	+		EFB2_03394	0.75	-0.8
3,545,224	+		EFB2_03394	0.75	+0.7
3,545,224	+		EFB2_03394	0.75	-1.1
3,545,224	+		EFB2_03394	0.75	-1.6
3,545,224	+		EFB2_03394	0.75	-2.2
3,545,224	+		EFB2_03394	0.75	+0.6
3,545,224	+		EFB2_03394	0.75	-1.1
3,545,224	+		EFB2_03394	0.75	-1.4
3,545,224	+		EFB2_03394	0.75	+0.0
3,545,224	+		EFB2_03394	0.75	-1.2
3,545,224	+		EFB2_03394	0.75	+0.3
3,545,224	+		EFB2_03394	0.75	-1.5
3,545,224	+		EFB2_03394	0.75	-3.5
3,545,224	+		EFB2_03394	0.75	-0.6
3,545,224	+		EFB2_03394	0.75	+0.3
3,545,224	+		EFB2_03394	0.75	+0.5
3,545,224	+		EFB2_03394	0.75	+0.4
3,545,224	+		EFB2_03394	0.75	+0.8
3,545,224	+		EFB2_03394	0.75	+1.8
3,545,224	+		EFB2_03394	0.75	+1.7
3,545,224	+		EFB2_03394	0.75	+1.4
3,545,224	+		EFB2_03394	0.75	-0.8
3,545,225	-		EFB2_03394	0.75	+1.2
3,545,225	-		EFB2_03394	0.75	-0.7
3,545,225	-		EFB2_03394	0.75	-0.6
3,545,225	-		EFB2_03394	0.75	-2.2
3,545,225	-		EFB2_03394	0.75	+1.1
3,545,225	-		EFB2_03394	0.75	+0.4
3,545,225	-		EFB2_03394	0.75	-0.4
3,545,225	-		EFB2_03394	0.75	+0.6
3,545,225	-		EFB2_03394	0.75	-0.2
3,545,225	-		EFB2_03394	0.75	+0.9
3,545,225	-		EFB2_03394	0.75	+0.7
3,545,225	-		EFB2_03394	0.75	-0.4
3,545,225	-		EFB2_03394	0.75	-0.5
3,545,225	-		EFB2_03394	0.75	+0.9
3,545,225	-		EFB2_03394	0.75	-1.0
3,545,225	-		EFB2_03394	0.75	+0.3
3,545,225	-		EFB2_03394	0.75	-0.5
3,545,225	-		EFB2_03394	0.75	+1.6
3,545,225	-		EFB2_03394	0.75	-2.8
3,545,225	-		EFB2_03394	0.75	-1.6
3,545,225	-		EFB2_03394	0.75	+0.0
3,545,225	-		EFB2_03394	0.75	+1.3
3,545,225	-		EFB2_03394	0.75	+0.4
3,545,225	-		EFB2_03394	0.75	+0.8
3,545,225	-		EFB2_03394	0.75	-0.1
3,545,225	-		EFB2_03394	0.75	-2.2
3,545,225	-		EFB2_03394	0.75	+0.2
3,545,225	-		EFB2_03394	0.75	-1.3
3,545,255	+		EFB2_03394	0.77	-0.6
3,545,255	+		EFB2_03394	0.77	-0.7
3,545,255	+		EFB2_03394	0.77	+0.1
3,545,255	+		EFB2_03394	0.77	+0.9
3,545,256	-		EFB2_03394	0.77	+1.0
3,545,304	+		EFB2_03394	0.80	-1.8
3,545,304	+		EFB2_03394	0.80	+0.5
3,545,304	+		EFB2_03394	0.80	-2.0
3,545,304	+		EFB2_03394	0.80	-1.9
3,545,304	+		EFB2_03394	0.80	-0.6
3,545,304	+		EFB2_03394	0.80	-1.4
3,545,304	+		EFB2_03394	0.80	+1.0
3,545,304	+		EFB2_03394	0.80	-1.8
3,545,304	+		EFB2_03394	0.80	-2.5
3,545,304	+		EFB2_03394	0.80	-0.1
3,545,304	+		EFB2_03394	0.80	-0.5
3,545,304	+		EFB2_03394	0.80	+0.3
3,545,304	+		EFB2_03394	0.80	+0.1
3,545,304	+		EFB2_03394	0.80	+1.1
3,545,305	-		EFB2_03394	0.81	-1.3
3,545,305	-		EFB2_03394	0.81	-1.7
3,545,305	-		EFB2_03394	0.81	-1.4
3,545,305	-		EFB2_03394	0.81	+1.0
3,545,305	-		EFB2_03394	0.81	-2.7
3,545,305	-		EFB2_03394	0.81	+1.1
3,545,305	-		EFB2_03394	0.81	-0.5
3,545,305	-		EFB2_03394	0.81	-1.6
3,545,348	+		EFB2_03394	0.83	+1.6
3,545,348	+		EFB2_03394	0.83	+0.3
3,545,351	+		EFB2_03394	0.84	+1.5
3,545,362	+		EFB2_03394	0.84	-1.3
3,545,362	+		EFB2_03394	0.84	+0.2
3,545,362	+		EFB2_03394	0.84	-1.3
3,545,362	+		EFB2_03394	0.84	+1.9
3,545,362	+		EFB2_03394	0.84	+0.4
3,545,362	+		EFB2_03394	0.84	-0.4
3,545,362	+		EFB2_03394	0.84	-3.0
3,545,362	+		EFB2_03394	0.84	+1.1
3,545,362	+		EFB2_03394	0.84	-0.3
3,545,362	+		EFB2_03394	0.84	+2.0
3,545,362	+		EFB2_03394	0.84	-0.7
3,545,362	+		EFB2_03394	0.84	-0.6
3,545,362	+		EFB2_03394	0.84	-2.8
3,545,362	+		EFB2_03394	0.84	+1.3
3,545,362	+		EFB2_03394	0.84	-2.8
3,545,362	+		EFB2_03394	0.84	-0.8
3,545,362	+		EFB2_03394	0.84	-0.2
3,545,362	+		EFB2_03394	0.84	-0.5
3,545,362	+		EFB2_03394	0.84	-2.4
3,545,362	+		EFB2_03394	0.84	-1.3
3,545,362	+		EFB2_03394	0.84	-2.4
3,545,362	+		EFB2_03394	0.84	+0.0
3,545,362	+		EFB2_03394	0.84	+0.1
3,545,363	-		EFB2_03394	0.84	-2.3
3,545,363	-		EFB2_03394	0.84	+0.7
3,545,363	-		EFB2_03394	0.84	-2.5
3,545,363	-		EFB2_03394	0.84	-1.7
3,545,363	-		EFB2_03394	0.84	+0.1
3,545,363	-		EFB2_03394	0.84	+0.8
3,545,363	-		EFB2_03394	0.84	+2.0
3,545,363	-		EFB2_03394	0.84	-0.1
3,545,363	-		EFB2_03394	0.84	-2.8
3,545,363	-		EFB2_03394	0.84	-0.8
3,545,363	-		EFB2_03394	0.84	-2.5
3,545,363	-		EFB2_03394	0.84	-2.6
3,545,363	-		EFB2_03394	0.84	+1.2
3,545,363	-		EFB2_03394	0.84	-1.0
3,545,363	-		EFB2_03394	0.84	-1.1
3,545,363	-		EFB2_03394	0.84	-2.1
3,545,363	-		EFB2_03394	0.84	+1.1
3,545,363	-		EFB2_03394	0.84	+0.9
3,545,363	-		EFB2_03394	0.84	+0.0
3,545,363	-		EFB2_03394	0.84	+1.1
3,545,363	-		EFB2_03394	0.84	-2.4
3,545,363	-		EFB2_03394	0.84	-1.0
3,545,364	+		EFB2_03394	0.85	+3.0
3,545,364	+		EFB2_03394	0.85	+3.4
3,545,364	+		EFB2_03394	0.85	-1.1
3,545,364	+		EFB2_03394	0.85	+0.6
3,545,364	+		EFB2_03394	0.85	-0.8
3,545,365	-		EFB2_03394	0.85	-1.8
3,545,365	-		EFB2_03394	0.85	+1.8
3,545,365	-		EFB2_03394	0.85	-2.8
3,545,365	-		EFB2_03394	0.85	+1.2
3,545,365	-		EFB2_03394	0.85	-3.2
3,545,365	-		EFB2_03394	0.85	+0.0
3,545,365	-		EFB2_03394	0.85	+1.7
3,545,392	+		EFB2_03394	0.86	-0.3
3,545,392	+		EFB2_03394	0.86	+0.4
3,545,392	+		EFB2_03394	0.86	-0.9
3,545,392	+		EFB2_03394	0.86	-1.0
3,545,392	+		EFB2_03394	0.86	+1.2
3,545,392	+		EFB2_03394	0.86	+1.6
3,545,392	+		EFB2_03394	0.86	+0.1
3,545,392	+		EFB2_03394	0.86	+0.7
3,545,393	-		EFB2_03394	0.87	-2.1
3,545,393	-		EFB2_03394	0.87	-0.4
3,545,393	-		EFB2_03394	0.87	+0.2
3,545,393	-		EFB2_03394	0.87	-0.5
3,545,393	-		EFB2_03394	0.87	-0.6
3,545,393	-		EFB2_03394	0.87	+1.5
3,545,393	-		EFB2_03394	0.87	+0.2
3,545,393	-		EFB2_03394	0.87	+0.1
3,545,458	+				-0.9
3,545,458	+				+0.8
3,545,458	+				+0.7
3,545,458	+				+0.3
3,545,458	+				+0.7
3,545,459	-				-0.1
3,545,459	-				+1.4
3,545,459	-				-0.1
3,545,459	-				-2.9
3,545,459	-				+0.2
3,545,459	-				+0.4
3,545,459	-				-0.5
3,545,473	+				-2.2
3,545,473	+				+0.8
3,545,473	+				-1.0
3,545,473	+				-0.3
3,545,473	+				+0.0
3,545,473	+				+0.8
3,545,473	+				-1.6
3,545,473	+				+1.2
3,545,473	+				+1.0
3,545,473	+				-0.1
3,545,473	+				-0.5
3,545,473	+				+2.0
3,545,473	+				-2.1
3,545,473	+				-1.7
3,545,473	+				+0.8
3,545,473	+				-1.1
3,545,473	+				+0.2
3,545,473	+				+0.8
3,545,473	+				-1.5
3,545,473	+				-1.6
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