Strain Fitness in Escherichia fergusonii Becca around EFB2_02648

Experiment: BHIS_CaCl2 no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community
2,801,257	+				-0.1
2,801,258	-				-0.8
2,801,258	-				-0.6
2,801,258	-				-0.8
2,801,289	-				-0.6
2,801,342	-				-0.0
2,801,406	+		EFB2_02647	0.16	-1.7
2,801,406	+		EFB2_02647	0.16	+2.5
2,801,406	+		EFB2_02647	0.16	-1.5
2,801,406	+		EFB2_02647	0.16	-1.3
2,801,406	+		EFB2_02647	0.16	+2.2
2,801,406	+		EFB2_02647	0.16	-1.4
2,801,406	+		EFB2_02647	0.16	+2.2
2,801,406	+		EFB2_02647	0.16	-0.1
2,801,406	+		EFB2_02647	0.16	-2.3
2,801,406	+		EFB2_02647	0.16	-2.6
2,801,406	+		EFB2_02647	0.16	-2.2
2,801,406	+		EFB2_02647	0.16	-1.3
2,801,407	-		EFB2_02647	0.16	+1.4
2,801,407	-		EFB2_02647	0.16	-2.2
2,801,407	-		EFB2_02647	0.16	-1.4
2,801,407	-		EFB2_02647	0.16	+0.8
2,801,407	-		EFB2_02647	0.16	-0.5
2,801,407	-		EFB2_02647	0.16	-1.7
2,801,407	-		EFB2_02647	0.16	-2.2
2,801,407	-		EFB2_02647	0.16	-1.4
2,801,407	-		EFB2_02647	0.16	+0.6
2,801,407	-		EFB2_02647	0.16	+2.0
2,801,407	-		EFB2_02647	0.16	+0.2
2,801,407	-		EFB2_02647	0.16	-0.2
2,801,407	-		EFB2_02647	0.16	+1.5
2,801,407	-		EFB2_02647	0.16	+1.3
2,801,407	-		EFB2_02647	0.16	+0.1
2,801,410	+		EFB2_02647	0.16	-1.2
2,801,410	+		EFB2_02647	0.16	-0.5
2,801,410	+		EFB2_02647	0.16	-2.5
2,801,410	+		EFB2_02647	0.16	-1.0
2,801,410	+		EFB2_02647	0.16	+0.3
2,801,410	+		EFB2_02647	0.16	+1.2
2,801,410	+		EFB2_02647	0.16	+0.4
2,801,410	+		EFB2_02647	0.16	+2.2
2,801,411	-		EFB2_02647	0.16	-0.5
2,801,411	-		EFB2_02647	0.16	-2.6
2,801,411	-		EFB2_02647	0.16	-0.8
2,801,411	-		EFB2_02647	0.16	-1.5
2,801,411	-		EFB2_02647	0.16	+0.3
2,801,411	-		EFB2_02647	0.16	-0.0
2,801,411	-		EFB2_02647	0.16	-0.7
2,801,411	-		EFB2_02647	0.16	-0.3
2,801,487	+		EFB2_02647	0.26	+0.2
2,801,488	-		EFB2_02647	0.26	+0.3
2,801,488	-		EFB2_02647	0.26	+0.3
2,801,488	-		EFB2_02647	0.26	-1.3
2,801,488	-		EFB2_02647	0.26	-2.7
2,801,488	-		EFB2_02647	0.26	+1.8
2,801,488	-		EFB2_02647	0.26	+1.0
2,801,488	-		EFB2_02647	0.26	-1.5
2,801,615	+		EFB2_02647	0.43	-1.9
2,801,615	+		EFB2_02647	0.43	+1.3
2,801,616	-		EFB2_02647	0.43	-0.9
2,801,616	-		EFB2_02647	0.43	-1.2
2,801,625	+		EFB2_02647	0.44	+2.5
2,801,687	+		EFB2_02647	0.52	-1.8
2,801,688	-		EFB2_02647	0.52	+1.3
2,801,706	+		EFB2_02647	0.55	-1.2
2,801,706	+		EFB2_02647	0.55	+0.1
2,801,707	-		EFB2_02647	0.55	-1.1
2,801,818	+		EFB2_02647	0.69	-1.6
2,801,818	+		EFB2_02647	0.69	+1.2
2,801,819	-		EFB2_02647	0.70	-2.0
2,801,819	-		EFB2_02647	0.70	+1.4
2,801,819	-		EFB2_02647	0.70	-1.3
2,801,819	-		EFB2_02647	0.70	-1.3
2,801,819	-		EFB2_02647	0.70	-2.7
2,801,819	-		EFB2_02647	0.70	-1.0
2,801,823	+		EFB2_02647	0.70	-0.6
2,801,824	-		EFB2_02647	0.70	+1.5
2,801,824	-		EFB2_02647	0.70	+0.6
2,801,824	-		EFB2_02647	0.70	-0.4
2,801,824	-		EFB2_02647	0.70	-2.6
2,801,824	-		EFB2_02647	0.70	+0.8
2,801,824	-		EFB2_02647	0.70	+0.7
2,801,836	-		EFB2_02647	0.72	-2.5
2,801,836	-		EFB2_02647	0.72	+0.4
2,801,886	+		EFB2_02647	0.78	-0.4
2,801,887	-		EFB2_02647	0.78	+0.7
2,801,887	-		EFB2_02647	0.78	+0.3
2,801,938	+		EFB2_02647	0.85	-0.4
2,801,938	+		EFB2_02647	0.85	-2.2
2,801,938	+		EFB2_02647	0.85	-2.2
2,801,938	+		EFB2_02647	0.85	-1.3
2,801,939	-		EFB2_02647	0.85	-0.4
2,801,939	-		EFB2_02647	0.85	+1.0
2,801,939	-		EFB2_02647	0.85	-1.0
2,801,939	-		EFB2_02647	0.85	+0.3
2,801,939	-		EFB2_02647	0.85	-1.3
2,802,010	+				-0.6
2,802,010	+				-0.5
2,802,011	-				-0.5
2,802,031	-				-0.5
2,802,031	-				+3.8
2,802,068	+				-0.8
2,802,068	+				-1.7
2,802,068	+				-0.8
2,802,069	-				-0.7
2,802,069	-				-1.5
2,802,083	+				-1.3
2,802,083	+				+0.0
2,802,084	-				-0.5
2,802,084	-				-1.7
2,802,084	-				-0.2
2,802,084	-				+2.0
2,802,155	+				-0.9
2,802,156	-				-1.2
2,802,156	-				-2.7
2,802,156	-				+0.2
2,802,156	-				-2.7
2,802,184	+				-1.2
2,802,206	+				-1.7
2,802,206	+				+0.7
2,802,809	+				+1.1
2,802,809	+				-0.1
2,802,809	+				+1.4
2,802,810	-				-1.8
2,802,810	-				+1.0
2,802,810	-				+1.0
2,802,810	-				-0.6
2,802,827	+				-0.1
2,802,827	+				+2.5
2,802,827	+				+0.6
2,802,827	+				+0.8
2,802,828	-				-2.5
2,802,828	-				+0.7
2,802,828	-				-1.6
2,802,854	+				-0.6
2,802,855	-				-1.0
2,802,869	+				-0.1
2,802,876	+				+0.9
2,802,877	-				-1.2
2,802,886	+				+1.3
2,802,886	+				-1.7
2,802,886	+				-0.8
2,802,886	+				+0.4
2,802,886	+				+2.0
2,802,886	+				-0.2
2,802,887	-				+0.9
2,802,887	-				-1.7
2,802,887	-				+0.4
2,802,889	+				+1.6
2,802,890	-				-1.4
2,802,900	+				+1.0
2,802,900	+				-0.2
2,802,901	-				+0.6
2,802,901	-				-2.2
2,802,901	-				+0.1
2,802,901	-				+1.6
2,802,901	-				+0.8
2,802,901	-				-0.6
2,802,924	+				-0.0
2,802,924	+				-1.7
2,802,924	+				-3.2
2,802,925	-				+1.2
2,802,927	+				-1.0
2,802,927	+				-1.2
2,802,928	-				+1.7
2,802,969	-				+0.4
2,802,983	-				-0.4
2,803,028	+				-1.0
2,803,029	-				+1.8
2,803,029	-				-2.4
2,803,049	-				+0.2
2,803,049	-				+0.0
2,803,069	+				-0.1
2,803,076	+				+0.6
2,803,077	-				-1.2
2,803,134	-				-2.0
2,803,134	-				+0.2
2,803,183	+		EFB2_02649	0.12	+0.3
2,803,237	-		EFB2_02649	0.14	-0.6
2,803,237	-		EFB2_02649	0.14	+0.9
2,803,279	+		EFB2_02649	0.15	-0.2
2,803,279	+		EFB2_02649	0.15	+0.4
2,803,279	+		EFB2_02649	0.15	+0.6
2,803,279	+		EFB2_02649	0.15	-1.7
2,803,279	+		EFB2_02649	0.15	+1.1
2,803,279	+		EFB2_02649	0.15	-1.8
2,803,280	-		EFB2_02649	0.15	-0.8
2,803,280	-		EFB2_02649	0.15	-1.4
2,803,280	-		EFB2_02649	0.15	+1.5
2,803,280	-		EFB2_02649	0.15	-0.0
2,803,280	-		EFB2_02649	0.15	-0.7
2,803,280	-		EFB2_02649	0.15	+3.3
2,803,280	-		EFB2_02649	0.15	+1.6
2,803,280	-		EFB2_02649	0.15	-0.5
2,803,281	+		EFB2_02649	0.15	+0.2
2,803,281	+		EFB2_02649	0.15	+2.7
2,803,281	+		EFB2_02649	0.15	-1.7
2,803,282	-		EFB2_02649	0.15	-1.0
2,803,282	-		EFB2_02649	0.15	-0.9
2,803,282	-		EFB2_02649	0.15	+0.9
2,803,299	+		EFB2_02649	0.16	-1.3
2,803,299	+		EFB2_02649	0.16	+0.2
2,803,299	+		EFB2_02649	0.16	-0.6
2,803,299	+		EFB2_02649	0.16	+0.9
2,803,299	+		EFB2_02649	0.16	+0.2
2,803,299	+		EFB2_02649	0.16	+4.4
2,803,299	+		EFB2_02649	0.16	-0.0
2,803,299	+		EFB2_02649	0.16	-1.0
2,803,300	-		EFB2_02649	0.16	-0.6
2,803,300	-		EFB2_02649	0.16	+1.8
2,803,300	-		EFB2_02649	0.16	-2.1
2,803,300	-		EFB2_02649	0.16	-1.0
2,803,303	+		EFB2_02649	0.16	+1.8
2,803,303	+		EFB2_02649	0.16	-1.7
2,803,303	+		EFB2_02649	0.16	-0.4
2,803,304	-		EFB2_02649	0.16	-1.3
2,803,304	-		EFB2_02649	0.16	+0.6
2,803,304	-		EFB2_02649	0.16	-0.0
2,803,325	+		EFB2_02649	0.17	-1.9
2,803,325	+		EFB2_02649	0.17	+0.2
2,803,370	-		EFB2_02649	0.18	-0.2
2,803,382	-		EFB2_02649	0.19	-2.5
2,803,434	+		EFB2_02649	0.21	+1.6
2,803,434	+		EFB2_02649	0.21	-0.2
2,803,434	+		EFB2_02649	0.21	+2.2
2,803,434	+		EFB2_02649	0.21	-0.1
2,803,435	-		EFB2_02649	0.21	-1.2
2,803,441	+		EFB2_02649	0.21	-0.3
2,803,472	+		EFB2_02649	0.22	+0.5
2,803,472	+		EFB2_02649	0.22	+0.4
2,803,472	+		EFB2_02649	0.22	+0.1
2,803,472	+		EFB2_02649	0.22	-0.9
2,803,472	+		EFB2_02649	0.22	-0.3
2,803,472	+		EFB2_02649	0.22	-0.6
2,803,472	+		EFB2_02649	0.22	+0.8
2,803,472	+		EFB2_02649	0.22	+1.5
2,803,472	+		EFB2_02649	0.22	-0.2
2,803,472	+		EFB2_02649	0.22	-2.5
2,803,472	+		EFB2_02649	0.22	+0.4
2,803,472	+		EFB2_02649	0.22	+0.4
2,803,472	+		EFB2_02649	0.22	+1.5
2,803,473	-		EFB2_02649	0.22	+0.2
2,803,473	-		EFB2_02649	0.22	-0.4
2,803,473	-		EFB2_02649	0.22	+0.5
2,803,473	-		EFB2_02649	0.22	-0.0
2,803,473	-		EFB2_02649	0.22	+4.4
2,803,473	-		EFB2_02649	0.22	-1.6
2,803,473	-		EFB2_02649	0.22	+0.6
2,803,473	-		EFB2_02649	0.22	+2.3
2,803,476	+		EFB2_02649	0.22	-0.2
2,803,501	+		EFB2_02649	0.23	-0.1
2,803,501	+		EFB2_02649	0.23	+1.2
2,803,502	-		EFB2_02649	0.23	+0.2
2,803,502	-		EFB2_02649	0.23	+1.5
2,803,502	-		EFB2_02649	0.23	-0.1
2,803,504	+		EFB2_02649	0.24	-0.1
2,803,504	+		EFB2_02649	0.24	-1.4
2,803,504	+		EFB2_02649	0.24	+1.7
2,803,522	+		EFB2_02649	0.24	+0.3
2,803,522	+		EFB2_02649	0.24	-0.1
2,803,522	+		EFB2_02649	0.24	-0.3
2,803,522	+		EFB2_02649	0.24	-2.4
2,803,522	+		EFB2_02649	0.24	+1.6
2,803,523	-		EFB2_02649	0.24	+0.2
2,803,523	-		EFB2_02649	0.24	+2.6
2,803,523	-		EFB2_02649	0.24	-1.6
2,803,523	-		EFB2_02649	0.24	+0.4
2,803,576	+		EFB2_02649	0.26	-1.3
2,803,576	+		EFB2_02649	0.26	-0.2
2,803,577	-		EFB2_02649	0.26	-1.3
2,803,634	-		EFB2_02649	0.28	-1.7
2,803,634	-		EFB2_02649	0.28	-0.4
2,803,635	+		EFB2_02649	0.28	+2.6
2,803,635	+		EFB2_02649	0.28	+1.2
2,803,635	+		EFB2_02649	0.28	-0.8
2,803,635	+		EFB2_02649	0.28	+0.9
2,803,635	+		EFB2_02649	0.28	+1.2
2,803,635	+		EFB2_02649	0.28	-2.4
2,803,635	+		EFB2_02649	0.28	-1.5
2,803,635	+		EFB2_02649	0.28	+2.2
2,803,635	+		EFB2_02649	0.28	+2.2
2,803,636	-		EFB2_02649	0.28	-0.2
2,803,636	-		EFB2_02649	0.28	-0.6
2,803,636	-		EFB2_02649	0.28	-1.0
2,803,636	-		EFB2_02649	0.28	-0.3
2,803,636	-		EFB2_02649	0.28	+0.5
2,803,636	-		EFB2_02649	0.28	-0.6
2,803,636	-		EFB2_02649	0.28	-1.8
2,803,636	-		EFB2_02649	0.28	+1.2
2,803,636	-		EFB2_02649	0.28	+0.8
2,803,636	-		EFB2_02649	0.28	+0.3
2,803,636	-		EFB2_02649	0.28	+1.3
2,803,636	-		EFB2_02649	0.28	-0.8
2,803,636	-		EFB2_02649	0.28	-2.2
2,803,636	-		EFB2_02649	0.28	-1.4
2,803,636	-		EFB2_02649	0.28	-0.2
2,803,636	-		EFB2_02649	0.28	+0.1
2,803,636	-		EFB2_02649	0.28	-1.3
2,803,659	+		EFB2_02649	0.29	-1.3
2,803,659	+		EFB2_02649	0.29	+2.2
2,803,659	+		EFB2_02649	0.29	-1.5
2,803,659	+		EFB2_02649	0.29	-0.2
2,803,659	+		EFB2_02649	0.29	+0.7
2,803,659	+		EFB2_02649	0.29	+0.9
2,803,659	+		EFB2_02649	0.29	+0.1
2,803,659	+		EFB2_02649	0.29	-1.0
2,803,660	-		EFB2_02649	0.29	+1.9
2,803,660	-		EFB2_02649	0.29	+1.4
2,803,660	-		EFB2_02649	0.29	-0.2
2,803,660	-		EFB2_02649	0.29	-0.5
2,803,660	-		EFB2_02649	0.29	-1.2
2,803,660	-		EFB2_02649	0.29	-0.3
2,803,664	-		EFB2_02649	0.29	-0.2
2,803,681	+		EFB2_02649	0.30	-1.5
2,803,682	-		EFB2_02649	0.30	+0.9
2,803,723	-		EFB2_02649	0.32	+1.5
2,803,792	+		EFB2_02649	0.34	-0.1
2,803,792	+		EFB2_02649	0.34	-0.8
2,803,792	+		EFB2_02649	0.34	-1.2
2,803,792	+		EFB2_02649	0.34	-1.3
2,803,792	+		EFB2_02649	0.34	+0.6
2,803,792	+		EFB2_02649	0.34	+3.6
2,803,793	-		EFB2_02649	0.34	+1.2
2,803,793	-		EFB2_02649	0.34	-2.5
2,803,793	-		EFB2_02649	0.34	+0.1
2,803,793	-		EFB2_02649	0.34	-0.9
2,803,793	-		EFB2_02649	0.34	+0.2
2,803,803	+		EFB2_02649	0.35	-0.4
2,803,803	+		EFB2_02649	0.35	-0.3
2,803,803	+		EFB2_02649	0.35	-1.1
2,803,804	-		EFB2_02649	0.35	+1.5
2,803,804	-		EFB2_02649	0.35	-0.5
2,803,804	-		EFB2_02649	0.35	+0.6
2,803,804	-		EFB2_02649	0.35	+1.5
2,803,804	-		EFB2_02649	0.35	-0.5
2,803,805	+		EFB2_02649	0.35	+0.9
2,803,805	+		EFB2_02649	0.35	+0.8
2,803,806	-		EFB2_02649	0.35	+0.7
2,803,806	-		EFB2_02649	0.35	-0.4
2,803,806	-		EFB2_02649	0.35	+1.2
2,803,806	-		EFB2_02649	0.35	-0.8