Strain Fitness in Escherichia fergusonii Becca around EFB2_02413

Experiment: BHIS_CaCl2 no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community
2,552,454	-				-0.6
2,552,459	+				-0.8
2,552,460	-				-0.6
2,552,499	+		EFB2_02412	0.12	-0.8
2,552,499	+		EFB2_02412	0.12	+0.5
2,552,499	+		EFB2_02412	0.12	-2.8
2,552,499	+		EFB2_02412	0.12	-0.0
2,552,499	+		EFB2_02412	0.12	+1.2
2,552,499	+		EFB2_02412	0.12	-3.3
2,552,499	+		EFB2_02412	0.12	-0.2
2,552,499	+		EFB2_02412	0.12	-1.3
2,552,499	+		EFB2_02412	0.12	-2.6
2,552,499	+		EFB2_02412	0.12	-0.8
2,552,500	-		EFB2_02412	0.12	+1.2
2,552,500	-		EFB2_02412	0.12	+0.2
2,552,500	-		EFB2_02412	0.12	-0.4
2,552,500	-		EFB2_02412	0.12	-1.8
2,552,515	-		EFB2_02412	0.14	-1.0
2,552,661	+		EFB2_02412	0.28	+1.2
2,552,661	+		EFB2_02412	0.28	-2.3
2,552,662	-		EFB2_02412	0.28	-0.0
2,552,663	+		EFB2_02412	0.28	+1.5
2,552,663	+		EFB2_02412	0.28	+1.4
2,552,663	+		EFB2_02412	0.28	-0.5
2,552,663	+		EFB2_02412	0.28	+0.2
2,552,663	+		EFB2_02412	0.28	-0.4
2,552,663	+		EFB2_02412	0.28	-1.3
2,552,663	+		EFB2_02412	0.28	+0.8
2,552,663	+		EFB2_02412	0.28	-1.5
2,552,663	+		EFB2_02412	0.28	-1.1
2,552,663	+		EFB2_02412	0.28	-2.4
2,552,663	+		EFB2_02412	0.28	-1.4
2,552,663	+		EFB2_02412	0.28	+0.2
2,552,663	+		EFB2_02412	0.28	+0.5
2,552,664	-		EFB2_02412	0.28	-1.1
2,552,664	-		EFB2_02412	0.28	+0.5
2,552,664	-		EFB2_02412	0.28	+0.4
2,552,664	-		EFB2_02412	0.28	+2.8
2,552,667	+		EFB2_02412	0.29	+0.6
2,552,667	+		EFB2_02412	0.29	+1.5
2,552,668	-		EFB2_02412	0.29	-0.1
2,552,668	-		EFB2_02412	0.29	+0.9
2,552,696	+		EFB2_02412	0.32	-0.4
2,552,696	+		EFB2_02412	0.32	-0.2
2,552,696	+		EFB2_02412	0.32	-1.7
2,552,696	+		EFB2_02412	0.32	-0.2
2,552,696	+		EFB2_02412	0.32	+0.6
2,552,696	+		EFB2_02412	0.32	-0.4
2,552,696	+		EFB2_02412	0.32	+2.2
2,552,697	-		EFB2_02412	0.32	+0.6
2,552,697	-		EFB2_02412	0.32	+0.8
2,552,699	+		EFB2_02412	0.32	+0.5
2,552,699	+		EFB2_02412	0.32	+1.4
2,552,699	+		EFB2_02412	0.32	-0.8
2,552,699	+		EFB2_02412	0.32	+0.5
2,552,699	+		EFB2_02412	0.32	+1.2
2,552,699	+		EFB2_02412	0.32	+0.9
2,552,699	+		EFB2_02412	0.32	+0.9
2,552,699	+		EFB2_02412	0.32	-0.7
2,552,699	+		EFB2_02412	0.32	-0.1
2,552,699	+		EFB2_02412	0.32	-0.3
2,552,699	+		EFB2_02412	0.32	+0.9
2,552,699	+		EFB2_02412	0.32	+2.2
2,552,699	+		EFB2_02412	0.32	+1.0
2,552,699	+		EFB2_02412	0.32	+0.2
2,552,699	+		EFB2_02412	0.32	+2.2
2,552,700	-		EFB2_02412	0.32	+1.2
2,552,700	-		EFB2_02412	0.32	-0.4
2,552,700	-		EFB2_02412	0.32	+0.7
2,552,700	-		EFB2_02412	0.32	-1.4
2,552,700	-		EFB2_02412	0.32	-1.0
2,552,700	-		EFB2_02412	0.32	+0.4
2,552,700	-		EFB2_02412	0.32	+0.4
2,552,700	-		EFB2_02412	0.32	+0.6
2,552,731	+		EFB2_02412	0.35	-1.3
2,552,731	+		EFB2_02412	0.35	-1.3
2,552,732	-		EFB2_02412	0.35	+1.2
2,552,732	-		EFB2_02412	0.35	+1.2
2,552,732	-		EFB2_02412	0.35	+0.6
2,552,732	-		EFB2_02412	0.35	-0.6
2,552,788	+		EFB2_02412	0.41	+1.0
2,552,811	+		EFB2_02412	0.43	-1.1
2,552,811	+		EFB2_02412	0.43	+0.8
2,552,811	+		EFB2_02412	0.43	+1.6
2,552,811	+		EFB2_02412	0.43	-0.0
2,552,909	+		EFB2_02412	0.52	+0.3
2,552,913	-		EFB2_02412	0.53	+0.8
2,552,923	+		EFB2_02412	0.54	+1.5
2,552,923	+		EFB2_02412	0.54	-1.7
2,552,924	-		EFB2_02412	0.54	-1.7
2,552,924	-		EFB2_02412	0.54	+1.6
2,552,924	-		EFB2_02412	0.54	+1.5
2,552,924	-		EFB2_02412	0.54	-0.4
2,552,925	+		EFB2_02412	0.54	+0.6
2,552,925	+		EFB2_02412	0.54	-1.1
2,552,926	-		EFB2_02412	0.54	+0.6
2,552,932	-		EFB2_02412	0.55	-1.7
2,553,010	-		EFB2_02412	0.62	-3.3
2,553,065	+		EFB2_02412	0.68	-1.4
2,553,066	-		EFB2_02412	0.68	-0.3
2,553,066	-		EFB2_02412	0.68	-1.9
2,553,135	+		EFB2_02412	0.75	-1.5
2,553,135	+		EFB2_02412	0.75	-2.8
2,553,135	+		EFB2_02412	0.75	+0.5
2,553,135	+		EFB2_02412	0.75	+0.3
2,553,135	+		EFB2_02412	0.75	-0.4
2,553,135	+		EFB2_02412	0.75	-0.4
2,553,135	+		EFB2_02412	0.75	-0.6
2,553,135	+		EFB2_02412	0.75	+1.9
2,553,136	-		EFB2_02412	0.75	-1.4
2,553,136	-		EFB2_02412	0.75	-1.0
2,553,140	+		EFB2_02412	0.75	-0.0
2,553,141	-		EFB2_02412	0.75	+1.7
2,553,208	-		EFB2_02412	0.82	+0.4
2,553,224	+		EFB2_02412	0.83	-0.3
2,553,261	-		EFB2_02412	0.87	+0.9
2,553,264	+		EFB2_02412	0.87	+1.1
2,553,301	-				-1.4
2,553,410	+				-1.3
2,553,414	+				+0.8
2,553,415	-				+2.2
2,553,444	-				-1.5
2,553,503	+				+0.7
2,553,637	+		EFB2_02413	0.14	+2.2
2,553,675	+		EFB2_02413	0.16	-2.4
2,553,726	+		EFB2_02413	0.20	+1.1
2,553,750	+		EFB2_02413	0.22	-0.8
2,553,750	+		EFB2_02413	0.22	+1.8
2,553,751	-		EFB2_02413	0.22	-0.8
2,553,758	+		EFB2_02413	0.22	-2.7
2,553,759	-		EFB2_02413	0.23	+0.2
2,553,778	+		EFB2_02413	0.24	-2.0
2,553,779	-		EFB2_02413	0.24	+0.2
2,553,828	+		EFB2_02413	0.28	+1.2
2,553,828	+		EFB2_02413	0.28	+0.4
2,553,829	-		EFB2_02413	0.28	-1.6
2,553,829	-		EFB2_02413	0.28	-0.0
2,553,900	+		EFB2_02413	0.33	-0.1
2,553,901	-		EFB2_02413	0.33	-1.4
2,553,912	+		EFB2_02413	0.34	+0.5
2,553,912	+		EFB2_02413	0.34	+1.3
2,553,939	+		EFB2_02413	0.36	+0.4
2,553,939	+		EFB2_02413	0.36	-0.3
2,553,939	+		EFB2_02413	0.36	-1.8
2,553,939	+		EFB2_02413	0.36	+0.4
2,553,939	+		EFB2_02413	0.36	-0.3
2,553,978	+		EFB2_02413	0.39	-0.1
2,553,978	+		EFB2_02413	0.39	-1.2
2,553,978	+		EFB2_02413	0.39	-0.4
2,553,978	+		EFB2_02413	0.39	-2.0
2,553,979	-		EFB2_02413	0.39	-0.8
2,553,979	-		EFB2_02413	0.39	+0.7
2,553,997	-		EFB2_02413	0.40	+1.2
2,554,026	+		EFB2_02413	0.42	+0.3
2,554,026	+		EFB2_02413	0.42	-3.0
2,554,026	+		EFB2_02413	0.42	+1.5
2,554,026	+		EFB2_02413	0.42	+1.8
2,554,026	+		EFB2_02413	0.42	+0.2
2,554,026	+		EFB2_02413	0.42	+2.2
2,554,026	+		EFB2_02413	0.42	-0.8
2,554,027	-		EFB2_02413	0.42	+1.2
2,554,027	-		EFB2_02413	0.42	-1.0
2,554,027	-		EFB2_02413	0.42	-0.1
2,554,027	-		EFB2_02413	0.42	-0.8
2,554,027	-		EFB2_02413	0.42	+1.6
2,554,027	-		EFB2_02413	0.42	+0.6
2,554,027	-		EFB2_02413	0.42	-0.1
2,554,028	+		EFB2_02413	0.42	-1.8
2,554,028	+		EFB2_02413	0.42	+0.6
2,554,028	+		EFB2_02413	0.42	+0.6
2,554,028	+		EFB2_02413	0.42	-2.3
2,554,029	-		EFB2_02413	0.42	-1.4
2,554,066	-		EFB2_02413	0.45	+0.2
2,554,066	-		EFB2_02413	0.45	+0.3
2,554,077	+		EFB2_02413	0.46	-0.3
2,554,077	+		EFB2_02413	0.46	-1.0
2,554,155	+		EFB2_02413	0.51	+0.8
2,554,156	-		EFB2_02413	0.52	+0.1
2,554,156	-		EFB2_02413	0.52	+0.3
2,554,156	-		EFB2_02413	0.52	-0.8
2,554,227	-		EFB2_02413	0.57	+0.8
2,554,249	+		EFB2_02413	0.58	-2.7
2,554,249	+		EFB2_02413	0.58	+0.0
2,554,250	-		EFB2_02413	0.58	-1.5
2,554,378	+		EFB2_02413	0.68	+1.9
2,554,378	+		EFB2_02413	0.68	+0.5
2,554,378	+		EFB2_02413	0.68	-2.7
2,554,378	+		EFB2_02413	0.68	-1.7
2,554,380	+		EFB2_02413	0.68	-1.9
2,554,380	+		EFB2_02413	0.68	+1.0
2,554,380	+		EFB2_02413	0.68	+1.2
2,554,381	-		EFB2_02413	0.68	+0.2
2,554,381	-		EFB2_02413	0.68	+2.5
2,554,383	+		EFB2_02413	0.68	-0.1
2,554,383	+		EFB2_02413	0.68	-0.1
2,554,384	-		EFB2_02413	0.68	-3.0
2,554,384	-		EFB2_02413	0.68	-0.1
2,554,384	-		EFB2_02413	0.68	-0.4
2,554,386	+		EFB2_02413	0.68	-2.3
2,554,387	-		EFB2_02413	0.68	+0.9
2,554,392	+		EFB2_02413	0.69	+0.3
2,554,392	+		EFB2_02413	0.69	-3.0
2,554,393	-		EFB2_02413	0.69	+1.8
2,554,429	-		EFB2_02413	0.71	-1.4
2,554,436	+		EFB2_02413	0.72	+1.3
2,554,436	+		EFB2_02413	0.72	-0.8
2,554,437	-		EFB2_02413	0.72	-0.2
2,554,437	-		EFB2_02413	0.72	-0.7
2,554,437	-		EFB2_02413	0.72	-0.1
2,554,440	+		EFB2_02413	0.72	+0.9
2,554,441	-		EFB2_02413	0.72	+2.9
2,554,441	-		EFB2_02413	0.72	-1.0
2,554,447	+		EFB2_02413	0.73	+0.6
2,554,448	-		EFB2_02413	0.73	-1.6
2,554,448	-		EFB2_02413	0.73	-0.4
2,554,464	+		EFB2_02413	0.74	-1.3
2,554,488	+		EFB2_02413	0.76	-0.9
2,554,488	+		EFB2_02413	0.76	+0.5
2,554,489	-		EFB2_02413	0.76	-1.0
2,554,489	-		EFB2_02413	0.76	+1.4
2,554,489	-		EFB2_02413	0.76	-2.8
2,554,508	+		EFB2_02413	0.77	+1.7
2,554,575	+		EFB2_02413	0.82	+0.6
2,554,620	+		EFB2_02413	0.85	+1.2
2,554,621	-		EFB2_02413	0.86	+0.2
2,554,674	+		EFB2_02413	0.89	+1.0
2,554,674	+		EFB2_02413	0.89	-2.0
2,554,674	+		EFB2_02413	0.89	+0.1
2,554,687	+				+0.6
2,554,687	+				-0.1
2,554,687	+				+1.3
2,554,687	+				-0.2
2,554,687	+				-1.2
2,554,687	+				+0.5
2,554,687	+				+1.7
2,554,688	-				-0.8
2,554,688	-				-1.8
2,554,688	-				+1.2
2,554,745	+				-2.0
2,554,745	+				-1.5
2,554,746	-				-1.3
2,554,787	+				+0.7
2,554,787	+				-2.3
2,554,787	+				-0.3
2,554,787	+				+0.1
2,554,787	+				-0.9
2,554,787	+				-1.1
2,554,787	+				+1.8
2,554,787	+				-0.3
2,554,787	+				-0.8
2,554,787	+				+0.5
2,554,788	-				-0.0
2,554,816	+				-3.0
2,554,816	+				+0.1
2,554,837	+				+1.5
2,554,861	+				+0.8
2,554,861	+				-2.0
2,554,862	-				-1.7
2,554,862	-				+0.7
2,554,862	-				-0.0
2,554,863	+				+2.4
2,554,864	-				+0.2
2,554,875	+				+0.6
2,554,875	+				-1.5
2,554,875	+				-1.0
2,554,875	+				-0.2
2,554,876	-				-1.1
2,554,876	-				+1.1
2,554,876	-				+2.9
2,554,876	-				-1.3
2,554,883	+				+1.8
2,554,883	+				+1.7
2,554,885	+				-1.9
2,554,886	-				-2.0
2,554,889	+				-1.0
2,554,895	+				-0.8
2,554,923	-				+0.2
2,554,957	+				-0.6
2,554,957	+				-1.6
2,554,960	+				-2.4
2,555,024	+				-1.0
2,555,069	+		EFB2_02414	0.11	-0.6
2,555,069	+		EFB2_02414	0.11	-0.4
2,555,069	+		EFB2_02414	0.11	+2.2
2,555,070	-		EFB2_02414	0.11	+2.2
2,555,070	-		EFB2_02414	0.11	-1.6
2,555,070	-		EFB2_02414	0.11	+1.2
2,555,070	-		EFB2_02414	0.11	+0.2
2,555,070	-		EFB2_02414	0.11	-0.8
2,555,070	-		EFB2_02414	0.11	+0.2
2,555,082	+		EFB2_02414	0.12	-0.4
2,555,082	+		EFB2_02414	0.12	-2.3
2,555,083	-		EFB2_02414	0.12	+0.2
2,555,112	+		EFB2_02414	0.14	-1.8
2,555,112	+		EFB2_02414	0.14	-0.4
2,555,125	+		EFB2_02414	0.15	-0.4
2,555,125	+		EFB2_02414	0.15	+0.3
2,555,132	+		EFB2_02414	0.15	-0.2
2,555,133	-		EFB2_02414	0.15	-0.9
2,555,134	+		EFB2_02414	0.16	-0.7
2,555,134	+		EFB2_02414	0.16	+0.7
2,555,135	-		EFB2_02414	0.16	+0.6
2,555,211	+		EFB2_02414	0.21	+0.3
2,555,211	+		EFB2_02414	0.21	-1.0
2,555,211	+		EFB2_02414	0.21	-0.5
2,555,211	+		EFB2_02414	0.21	+0.6
2,555,212	-		EFB2_02414	0.21	-1.5
2,555,212	-		EFB2_02414	0.21	+0.2
2,555,212	-		EFB2_02414	0.21	-1.3
2,555,212	-		EFB2_02414	0.21	-1.3
2,555,212	-		EFB2_02414	0.21	+1.2
2,555,212	-		EFB2_02414	0.21	+0.5
2,555,212	-		EFB2_02414	0.21	+0.0
2,555,221	-		EFB2_02414	0.21	+0.1
2,555,319	+		EFB2_02414	0.28	+1.2
2,555,319	+		EFB2_02414	0.28	+0.0
2,555,320	-		EFB2_02414	0.28	-0.8
2,555,413	+		EFB2_02414	0.35	-0.1
2,555,437	+		EFB2_02414	0.36	+2.2
2,555,437	+		EFB2_02414	0.36	-0.1
2,555,438	-		EFB2_02414	0.36	+0.0
2,555,438	-		EFB2_02414	0.36	+2.2
2,555,545	+		EFB2_02414	0.44	+0.3
2,555,578	+		EFB2_02414	0.46	-1.9
2,555,578	+		EFB2_02414	0.46	-2.5
2,555,578	+		EFB2_02414	0.46	+1.8
2,555,579	-		EFB2_02414	0.46	-0.1
2,555,579	-		EFB2_02414	0.46	-0.6
2,555,603	-		EFB2_02414	0.48	+2.2
2,555,603	-		EFB2_02414	0.48	+0.2
2,555,679	+		EFB2_02414	0.53	+1.3
2,555,682	+		EFB2_02414	0.53	-2.5
2,555,682	+		EFB2_02414	0.53	-1.5
2,555,682	+		EFB2_02414	0.53	-1.1
2,555,682	+		EFB2_02414	0.53	+0.8
2,555,683	-		EFB2_02414	0.53	-1.0
2,555,683	-		EFB2_02414	0.53	-0.8
2,555,689	+		EFB2_02414	0.54	-1.8
2,555,756	+		EFB2_02414	0.58	+1.2
2,555,756	+		EFB2_02414	0.58	-0.1
2,555,756	+		EFB2_02414	0.58	-0.1
2,555,776	+		EFB2_02414	0.59	-0.5
2,555,776	+		EFB2_02414	0.59	+1.6
2,555,776	+		EFB2_02414	0.59	-1.9
2,555,776	+		EFB2_02414	0.59	+0.2
2,555,808	-		EFB2_02414	0.62	-0.2
2,555,808	-		EFB2_02414	0.62	+2.2
2,555,808	-		EFB2_02414	0.62	+2.2