Strain Fitness in Escherichia fergusonii Becca around EFB2_02152

Experiment: BHIS_CaCl2 no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community
2,285,149	+		EFB2_02150	0.40	+0.3
2,285,216	+		EFB2_02150	0.55	+0.6
2,285,216	+		EFB2_02150	0.55	-0.7
2,285,216	+		EFB2_02150	0.55	-0.7
2,285,216	+		EFB2_02150	0.55	-1.4
2,285,216	+		EFB2_02150	0.55	+0.3
2,285,216	+		EFB2_02150	0.55	-1.8
2,285,216	+		EFB2_02150	0.55	-0.7
2,285,216	+		EFB2_02150	0.55	-4.0
2,285,216	+		EFB2_02150	0.55	-1.1
2,285,216	+		EFB2_02150	0.55	-1.2
2,285,217	-		EFB2_02150	0.55	+0.3
2,285,217	-		EFB2_02150	0.55	+2.2
2,285,217	-		EFB2_02150	0.55	-0.4
2,285,218	+		EFB2_02150	0.56	-2.2
2,285,219	-		EFB2_02150	0.56	-2.4
2,285,254	+		EFB2_02150	0.64	-0.4
2,285,254	+		EFB2_02150	0.64	-0.6
2,285,254	+		EFB2_02150	0.64	-0.4
2,285,255	-		EFB2_02150	0.64	-0.7
2,285,356	+		EFB2_02150	0.87	+2.8
2,285,356	+		EFB2_02150	0.87	-1.3
2,285,356	+		EFB2_02150	0.87	+2.3
2,285,356	+		EFB2_02150	0.87	-0.9
2,285,356	+		EFB2_02150	0.87	-2.5
2,285,356	+		EFB2_02150	0.87	-0.9
2,285,356	+		EFB2_02150	0.87	+0.2
2,285,357	-		EFB2_02150	0.87	+0.3
2,285,357	-		EFB2_02150	0.87	-2.4
2,285,357	-		EFB2_02150	0.87	-1.2
2,285,357	-		EFB2_02150	0.87	-1.5
2,285,357	-		EFB2_02150	0.87	-3.2
2,285,357	-		EFB2_02150	0.87	-1.5
2,285,357	-		EFB2_02150	0.87	-1.0
2,285,357	-		EFB2_02150	0.87	-0.2
2,285,357	-		EFB2_02150	0.87	-0.9
2,285,357	-		EFB2_02150	0.87	+0.6
2,285,411	+				-2.1
2,285,412	-				-2.7
2,285,412	-				-1.4
2,285,412	-				+0.3
2,285,414	+				-0.3
2,285,414	+				-1.8
2,285,415	-				-1.8
2,285,415	-				-2.5
2,285,415	-				-0.3
2,285,415	-				-3.4
2,285,415	-				-2.5
2,285,415	-				+0.1
2,285,415	-				-2.8
2,285,415	-				+1.0
2,285,431	+				-2.2
2,285,431	+				+0.1
2,285,432	-				+1.2
2,285,432	-				+1.9
2,285,432	-				+1.7
2,285,671	+		EFB2_02151	0.56	-1.9
2,285,707	+		EFB2_02151	0.64	-0.2
2,285,708	-		EFB2_02151	0.64	-1.4
2,285,708	-		EFB2_02151	0.64	-2.7
2,285,708	-		EFB2_02151	0.64	-3.5
2,285,727	+		EFB2_02151	0.68	-1.6
2,285,727	+		EFB2_02151	0.68	-0.4
2,285,728	-		EFB2_02151	0.69	-1.2
2,285,731	+		EFB2_02151	0.69	-2.7
2,285,732	-		EFB2_02151	0.70	-0.4
2,285,758	+		EFB2_02151	0.75	-2.8
2,285,759	-		EFB2_02151	0.75	+1.2
2,285,759	-		EFB2_02151	0.75	+0.6
2,285,759	-		EFB2_02151	0.75	-3.1
2,285,867	+				+0.1
2,285,868	-				-1.9
2,285,877	+				+1.2
2,285,878	-				-1.4
2,285,878	-				-1.8
2,285,928	+				-0.2
2,285,929	-				-1.9
2,285,929	-				+0.3
2,285,946	+				-0.4
2,285,947	-				-1.4
2,285,947	-				-0.2
2,285,960	+				-0.8
2,285,961	-				-2.4
2,285,985	+				+1.8
2,285,986	-				-0.4
2,285,986	-				-0.4
2,285,986	-				-0.3
2,285,992	+				+0.1
2,285,992	+				-0.7
2,285,992	+				-2.5
2,285,992	+				+0.8
2,285,992	+				+0.2
2,285,993	-				+3.0
2,285,993	-				+2.2
2,285,993	-				-0.2
2,285,993	-				-3.0
2,285,993	-				-0.2
2,285,993	-				-0.8
2,286,000	+				-0.9
2,286,000	+				-2.5
2,286,000	+				-2.4
2,286,000	+				-0.8
2,286,000	+				+0.5
2,286,000	+				+0.4
2,286,000	+				-0.3
2,286,000	+				-0.6
2,286,000	+				+0.6
2,286,000	+				-1.2
2,286,000	+				-0.5
2,286,001	-				-0.8
2,286,001	-				-0.1
2,286,001	-				-0.3
2,286,001	-				+0.5
2,286,001	-				-1.4
2,286,001	-				+0.7
2,286,001	-				-1.7
2,286,061	+				-0.4
2,286,061	+				+1.6
2,286,061	+				-0.6
2,286,061	+				-2.1
2,286,062	-				-1.7
2,286,062	-				+0.9
2,286,062	-				+1.0
2,286,064	+				-1.5
2,286,064	+				-0.3
2,286,064	+				-0.8
2,286,065	-				+0.7
2,286,239	+				-1.5
2,286,239	+				-1.4
2,286,286	+		EFB2_02152	0.12	+1.0
2,286,286	+		EFB2_02152	0.12	+0.2
2,286,287	-		EFB2_02152	0.12	+1.1
2,286,287	-		EFB2_02152	0.12	-1.4
2,286,287	-		EFB2_02152	0.12	+0.4
2,286,287	-		EFB2_02152	0.12	-1.9
2,286,293	+		EFB2_02152	0.12	+0.5
2,286,293	+		EFB2_02152	0.12	-0.7
2,286,367	+		EFB2_02152	0.16	+2.5
2,286,367	+		EFB2_02152	0.16	-0.5
2,286,367	+		EFB2_02152	0.16	-0.4
2,286,367	+		EFB2_02152	0.16	-1.7
2,286,370	+		EFB2_02152	0.16	-0.3
2,286,370	+		EFB2_02152	0.16	-2.4
2,286,371	-		EFB2_02152	0.16	-0.4
2,286,409	-		EFB2_02152	0.18	-1.3
2,286,430	+		EFB2_02152	0.19	-1.6
2,286,430	+		EFB2_02152	0.19	-0.4
2,286,491	+		EFB2_02152	0.22	+0.6
2,286,492	-		EFB2_02152	0.22	-2.5
2,286,492	-		EFB2_02152	0.22	+0.8
2,286,492	-		EFB2_02152	0.22	-1.0
2,286,492	-		EFB2_02152	0.22	+0.8
2,286,509	+		EFB2_02152	0.23	+0.9
2,286,509	+		EFB2_02152	0.23	+1.4
2,286,509	+		EFB2_02152	0.23	-0.2
2,286,510	-		EFB2_02152	0.23	+0.1
2,286,584	+		EFB2_02152	0.27	+0.9
2,286,584	+		EFB2_02152	0.27	-1.5
2,286,584	+		EFB2_02152	0.27	-1.6
2,286,585	-		EFB2_02152	0.27	-0.3
2,286,585	-		EFB2_02152	0.27	-0.8
2,286,585	-		EFB2_02152	0.27	-3.1
2,286,585	-		EFB2_02152	0.27	-1.1
2,286,604	+		EFB2_02152	0.28	+0.4
2,286,649	+		EFB2_02152	0.30	-0.9
2,286,649	+		EFB2_02152	0.30	-0.5
2,286,650	-		EFB2_02152	0.30	+1.3
2,286,758	-		EFB2_02152	0.36	-2.1
2,286,804	+		EFB2_02152	0.38	-0.6
2,286,804	+		EFB2_02152	0.38	-0.2
2,286,804	+		EFB2_02152	0.38	+0.5
2,286,804	+		EFB2_02152	0.38	+0.7
2,286,804	+		EFB2_02152	0.38	-1.5
2,286,804	+		EFB2_02152	0.38	+0.9
2,286,804	+		EFB2_02152	0.38	-1.0
2,286,805	-		EFB2_02152	0.38	-0.2
2,286,833	-		EFB2_02152	0.40	-1.8
2,286,877	+		EFB2_02152	0.42	-0.1
2,286,877	+		EFB2_02152	0.42	-0.6
2,286,878	-		EFB2_02152	0.42	+2.2
2,286,878	-		EFB2_02152	0.42	+0.2
2,286,878	-		EFB2_02152	0.42	-2.4
2,286,967	+		EFB2_02152	0.46	-2.4
2,286,967	+		EFB2_02152	0.46	+0.9
2,286,967	+		EFB2_02152	0.46	-2.1
2,286,967	+		EFB2_02152	0.46	-1.5
2,286,967	+		EFB2_02152	0.46	-0.0
2,286,967	+		EFB2_02152	0.46	-1.5
2,286,967	+		EFB2_02152	0.46	-0.8
2,286,967	+		EFB2_02152	0.46	+0.2
2,286,967	+		EFB2_02152	0.46	-0.9
2,286,968	-		EFB2_02152	0.46	-0.2
2,286,968	-		EFB2_02152	0.46	+1.4
2,286,968	-		EFB2_02152	0.46	+0.6
2,286,968	-		EFB2_02152	0.46	-2.3
2,286,968	-		EFB2_02152	0.46	-1.9
2,286,968	-		EFB2_02152	0.46	+0.6
2,287,037	+		EFB2_02152	0.50	-2.7
2,287,037	+		EFB2_02152	0.50	+1.1
2,287,038	-		EFB2_02152	0.50	-2.6
2,287,038	-		EFB2_02152	0.50	+1.0
2,287,130	-		EFB2_02152	0.54	-2.6
2,287,178	-		EFB2_02152	0.57	-1.3
2,287,178	-		EFB2_02152	0.57	-0.3
2,287,178	-		EFB2_02152	0.57	-1.2
2,287,282	+		EFB2_02152	0.62	-1.2
2,287,283	-		EFB2_02152	0.62	-1.6
2,287,329	+		EFB2_02152	0.64	-2.5
2,287,329	+		EFB2_02152	0.64	+0.3
2,287,329	+		EFB2_02152	0.64	+0.4
2,287,329	+		EFB2_02152	0.64	-1.7
2,287,329	+		EFB2_02152	0.64	+0.1
2,287,329	+		EFB2_02152	0.64	-0.1
2,287,330	-		EFB2_02152	0.65	-0.7
2,287,330	-		EFB2_02152	0.65	+0.4
2,287,330	-		EFB2_02152	0.65	+0.3
2,287,330	-		EFB2_02152	0.65	-1.3
2,287,330	-		EFB2_02152	0.65	-1.1
2,287,330	-		EFB2_02152	0.65	+0.8
2,287,330	-		EFB2_02152	0.65	-0.0
2,287,333	+		EFB2_02152	0.65	+0.2
2,287,333	+		EFB2_02152	0.65	-2.1
2,287,333	+		EFB2_02152	0.65	-2.8
2,287,333	+		EFB2_02152	0.65	-4.0
2,287,334	-		EFB2_02152	0.65	-0.2
2,287,334	-		EFB2_02152	0.65	-0.2
2,287,334	-		EFB2_02152	0.65	+0.2
2,287,372	+		EFB2_02152	0.67	+0.0
2,287,390	+		EFB2_02152	0.68	-0.2
2,287,390	+		EFB2_02152	0.68	-1.8
2,287,390	+		EFB2_02152	0.68	-2.1
2,287,391	-		EFB2_02152	0.68	-1.2
2,287,391	-		EFB2_02152	0.68	+2.2
2,287,405	+		EFB2_02152	0.68	+0.1
2,287,405	+		EFB2_02152	0.68	-1.5
2,287,495	+		EFB2_02152	0.73	-0.8
2,287,496	-		EFB2_02152	0.73	-1.6
2,287,496	-		EFB2_02152	0.73	+1.5
2,287,517	-		EFB2_02152	0.74	-0.5
2,287,534	+		EFB2_02152	0.75	+1.6
2,287,535	-		EFB2_02152	0.75	+0.4
2,287,614	+		EFB2_02152	0.79	-0.2
2,287,615	-		EFB2_02152	0.79	+0.8
2,287,635	+		EFB2_02152	0.80	+2.4
2,287,635	+		EFB2_02152	0.80	+0.2
2,287,635	+		EFB2_02152	0.80	-0.7
2,287,635	+		EFB2_02152	0.80	+0.8
2,287,636	-		EFB2_02152	0.80	+0.6
2,287,636	-		EFB2_02152	0.80	+0.9
2,287,643	+		EFB2_02152	0.80	-0.1
2,287,659	+		EFB2_02152	0.81	-2.0
2,287,684	+		EFB2_02152	0.82	-1.7
2,287,684	+		EFB2_02152	0.82	+0.9
2,287,685	-		EFB2_02152	0.82	-1.2
2,287,685	-		EFB2_02152	0.82	-0.4
2,287,685	-		EFB2_02152	0.82	+0.6
2,287,685	-		EFB2_02152	0.82	+0.4
2,287,685	-		EFB2_02152	0.82	+1.3
2,287,705	+		EFB2_02152	0.83	-0.5
2,287,705	+		EFB2_02152	0.83	-0.0
2,287,705	+		EFB2_02152	0.83	-1.6
2,287,705	+		EFB2_02152	0.83	-0.4
2,287,706	-		EFB2_02152	0.83	-1.1
2,287,706	-		EFB2_02152	0.83	-0.9
2,287,708	+		EFB2_02152	0.84	+0.0
2,287,708	+		EFB2_02152	0.84	-0.1
2,287,708	+		EFB2_02152	0.84	-0.6
2,287,708	+		EFB2_02152	0.84	-1.9
2,287,708	+		EFB2_02152	0.84	-0.9
2,287,709	-		EFB2_02152	0.84	+0.6
2,287,709	-		EFB2_02152	0.84	+0.9
2,287,709	-		EFB2_02152	0.84	+0.5
2,287,709	-		EFB2_02152	0.84	-1.4
2,287,709	-		EFB2_02152	0.84	-0.8
2,287,709	-		EFB2_02152	0.84	-1.5
2,287,709	-		EFB2_02152	0.84	-2.2
2,287,724	+		EFB2_02152	0.84	-1.8
2,287,724	+		EFB2_02152	0.84	+1.3
2,287,724	+		EFB2_02152	0.84	-0.3
2,287,724	+		EFB2_02152	0.84	-3.4
2,287,724	+		EFB2_02152	0.84	-1.3
2,287,724	+		EFB2_02152	0.84	-2.5
2,287,725	-		EFB2_02152	0.84	+0.8
2,287,725	-		EFB2_02152	0.84	-0.2
2,287,725	-		EFB2_02152	0.84	-0.2
2,287,725	-		EFB2_02152	0.84	-1.0
2,287,725	-		EFB2_02152	0.84	-1.2
2,287,725	-		EFB2_02152	0.84	-2.3
2,287,727	-		EFB2_02152	0.84	-1.4
2,287,727	-		EFB2_02152	0.84	-2.4
2,287,738	-		EFB2_02152	0.85	-0.6
2,287,777	+		EFB2_02152	0.87	+0.1
2,287,777	+		EFB2_02152	0.87	-0.4
2,287,777	+		EFB2_02152	0.87	-2.1
2,287,777	+		EFB2_02152	0.87	+0.8
2,287,843	+				-2.7
2,287,843	+				-2.4
2,287,843	+				+1.2
2,287,843	+				-3.1
2,287,844	-				-1.2
2,287,844	-				+0.2
2,287,844	-				+1.5
2,287,847	+				+0.4
2,287,847	+				-0.1
2,287,848	-				-2.2
2,287,848	-				-2.6
2,287,848	-				-1.6
2,287,864	+				-3.1
2,287,864	+				-0.9
2,287,864	+				-0.7
2,287,864	+				-0.8
2,287,864	+				-0.2
2,287,865	-				-1.3
2,287,865	-				-1.7
2,287,867	+				-0.2
2,287,867	+				-2.1
2,287,868	-				-1.7
2,287,868	-				-1.2
2,287,888	+				-1.0
2,287,888	+				+0.4
2,287,921	+				+1.0
2,287,921	+				+1.7
2,287,921	+				-2.4
2,287,921	+				-1.2
2,287,922	-				+0.1
2,287,922	-				+0.7
2,287,925	+				-2.7
2,287,925	+				-1.9
2,287,934	+				+0.2
2,287,934	+				-1.7
2,287,934	+				-0.5
2,287,934	+				-1.3
2,287,935	-				-0.4
2,288,014	+				-2.1
2,288,015	-				-1.0
2,288,050	-				-2.2
2,288,078	+				+0.3
2,288,103	+		EFB2_02153	0.12	+0.3
2,288,103	+		EFB2_02153	0.12	-1.5
2,288,103	+		EFB2_02153	0.12	-1.0
2,288,104	-		EFB2_02153	0.12	-1.4
2,288,118	+		EFB2_02153	0.14	-1.1
2,288,118	+		EFB2_02153	0.14	-0.8
2,288,118	+		EFB2_02153	0.14	-1.4
2,288,118	+		EFB2_02153	0.14	-0.2
2,288,118	+		EFB2_02153	0.14	-0.4
2,288,118	+		EFB2_02153	0.14	-0.0
2,288,118	+		EFB2_02153	0.14	+2.2
2,288,118	+		EFB2_02153	0.14	+0.6
2,288,118	+		EFB2_02153	0.14	-1.2
2,288,119	-		EFB2_02153	0.14	+1.2
2,288,119	-		EFB2_02153	0.14	-0.3
2,288,119	-		EFB2_02153	0.14	-0.0
2,288,119	-		EFB2_02153	0.14	-1.9
2,288,124	+		EFB2_02153	0.15	-1.0
2,288,124	+		EFB2_02153	0.15	-1.0
2,288,124	+		EFB2_02153	0.15	-1.3
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2,288,905	+				-1.5
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