Strain Fitness in Escherichia fergusonii Becca around EFB2_02104

Experiment: BHIS_CaCl2 no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community
2,253,504	+		EFB2_02101	0.82	+0.6
2,253,558	+				+0.2
2,253,558	+				-1.0
2,253,558	+				+0.3
2,253,558	+				-1.9
2,253,558	+				-0.8
2,253,558	+				-1.2
2,253,559	-				-0.7
2,253,559	-				-2.2
2,253,559	-				-0.0
2,253,559	-				+0.5
2,253,559	-				-1.1
2,253,559	-				-1.6
2,253,559	-				-1.9
2,253,559	-				+0.4
2,253,559	-				-1.7
2,253,559	-				+2.3
2,253,559	-				+0.3
2,253,559	-				-0.0
2,253,559	-				-3.0
2,253,559	-				-0.2
2,253,592	+				+0.4
2,253,592	+				-0.4
2,253,593	-				+0.2
2,253,593	-				-0.4
2,253,623	+				-1.3
2,253,623	+				-2.3
2,253,623	+				+0.1
2,253,623	+				+0.0
2,253,623	+				+0.3
2,253,623	+				-1.3
2,253,623	+				+0.5
2,253,623	+				+0.1
2,253,624	-				-2.3
2,253,624	-				-0.7
2,253,624	-				-0.4
2,253,624	-				-3.6
2,253,624	-				-1.7
2,253,624	-				-0.5
2,253,624	-				+1.1
2,253,624	-				+0.6
2,253,624	-				-0.8
2,253,624	-				-0.1
2,253,655	-				-1.0
2,253,674	+				-1.4
2,253,674	+				-1.9
2,253,681	-				-0.1
2,253,685	+				-0.4
2,253,685	+				-1.3
2,253,686	-				-1.2
2,253,700	-				+2.1
2,253,700	-				+1.3
2,253,713	+				-1.2
2,253,713	+				+1.6
2,253,713	+				+0.5
2,253,713	+				+1.6
2,253,713	+				-3.3
2,253,713	+				-0.1
2,253,713	+				-1.3
2,253,713	+				-0.3
2,253,713	+				+3.7
2,253,713	+				+0.9
2,253,713	+				+1.2
2,253,713	+				-1.5
2,253,713	+				+0.1
2,253,714	-				-0.6
2,253,714	-				-0.3
2,253,714	-				+0.3
2,253,714	-				-1.4
2,253,714	-				+0.8
2,253,714	-				+2.1
2,253,714	-				+0.8
2,253,714	-				+1.5
2,253,714	-				+0.1
2,253,714	-				+0.6
2,253,717	+				+3.0
2,253,717	+				+2.4
2,253,717	+				+0.1
2,253,718	-				+2.0
2,253,718	-				-1.7
2,253,718	-				+1.9
2,253,718	-				+3.1
2,253,720	-				-0.7
2,253,731	-				+0.6
2,253,731	-				-1.0
2,253,731	-				-0.4
2,253,745	-				+1.7
2,253,787	+		EFB2_02102	0.27	+0.8
2,253,859	+		EFB2_02102	0.58	+1.0
2,253,859	+		EFB2_02102	0.58	-1.2
2,253,859	+		EFB2_02102	0.58	-3.4
2,253,859	+		EFB2_02102	0.58	+2.1
2,253,860	-		EFB2_02102	0.58	-1.2
2,253,860	-		EFB2_02102	0.58	+1.6
2,253,860	-		EFB2_02102	0.58	+0.8
2,253,860	-		EFB2_02102	0.58	+0.7
2,253,860	-		EFB2_02102	0.58	+0.6
2,253,861	-		EFB2_02102	0.59	+1.7
2,253,864	+		EFB2_02102	0.60	+1.3
2,253,864	+		EFB2_02102	0.60	-1.6
2,253,864	+		EFB2_02102	0.60	+0.6
2,253,864	+		EFB2_02102	0.60	+0.9
2,253,864	+		EFB2_02102	0.60	+0.9
2,253,864	+		EFB2_02102	0.60	+0.8
2,253,864	+		EFB2_02102	0.60	+0.6
2,253,865	-		EFB2_02102	0.61	-1.6
2,253,865	-		EFB2_02102	0.61	+1.6
2,253,865	-		EFB2_02102	0.61	+0.8
2,253,865	-		EFB2_02102	0.61	-1.6
2,253,874	+		EFB2_02102	0.65	+2.6
2,253,874	+		EFB2_02102	0.65	-0.9
2,253,874	+		EFB2_02102	0.65	+1.1
2,253,874	+		EFB2_02102	0.65	+1.0
2,253,875	-		EFB2_02102	0.65	+3.1
2,253,959	+				-0.9
2,253,959	+				-0.2
2,253,960	-				+2.0
2,253,960	-				-2.1
2,253,960	-				+0.0
2,253,988	+				-2.3
2,253,989	-				-0.9
2,253,991	+				+1.6
2,253,991	+				+0.1
2,253,991	+				-1.3
2,253,991	+				-1.6
2,253,991	+				-2.6
2,253,991	+				-1.2
2,253,991	+				+0.8
2,253,991	+				-0.4
2,253,992	-				-2.1
2,253,992	-				+1.1
2,253,992	-				-0.4
2,253,992	-				+0.9
2,253,992	-				+0.6
2,253,992	-				+2.1
2,253,992	-				+1.7
2,254,053	+				-0.3
2,254,053	+				+0.8
2,254,053	+				+0.1
2,254,054	-				+1.3
2,254,063	-				+1.2
2,254,086	+				-0.5
2,254,086	+				+1.8
2,254,087	-				-0.3
2,254,090	+				-0.2
2,254,090	+				-0.6
2,254,090	+				+1.5
2,254,090	+				+0.3
2,254,090	+				-1.0
2,254,090	+				-1.9
2,254,090	+				+0.6
2,254,090	+				+1.0
2,254,090	+				-2.9
2,254,090	+				+0.2
2,254,090	+				+1.0
2,254,090	+				+1.1
2,254,090	+				+0.6
2,254,091	-				+2.3
2,254,091	-				+0.7
2,254,091	-				-0.6
2,254,091	-				+0.5
2,254,091	-				+1.3
2,254,093	+				+0.7
2,254,094	-				+2.3
2,254,183	-		EFB2_02103	0.24	+0.3
2,254,183	-		EFB2_02103	0.24	-0.9
2,254,183	-		EFB2_02103	0.24	+1.1
2,254,193	+		EFB2_02103	0.26	+1.8
2,254,193	+		EFB2_02103	0.26	+0.9
2,254,193	+		EFB2_02103	0.26	-0.5
2,254,194	-		EFB2_02103	0.27	+0.8
2,254,242	+		EFB2_02103	0.39	-0.3
2,254,242	+		EFB2_02103	0.39	-2.7
2,254,242	+		EFB2_02103	0.39	-2.6
2,254,243	-		EFB2_02103	0.40	-1.7
2,254,310	-		EFB2_02103	0.58	-2.6
2,254,394	+		EFB2_02103	0.80	-0.7
2,254,394	+		EFB2_02103	0.80	-0.6
2,254,394	+		EFB2_02103	0.80	-0.9
2,254,394	+		EFB2_02103	0.80	+0.3
2,254,394	+		EFB2_02103	0.80	+0.4
2,254,394	+		EFB2_02103	0.80	+0.4
2,254,394	+		EFB2_02103	0.80	+0.6
2,254,394	+		EFB2_02103	0.80	+1.2
2,254,394	+		EFB2_02103	0.80	-1.3
2,254,395	-		EFB2_02103	0.80	-1.9
2,254,395	-		EFB2_02103	0.80	+0.5
2,254,395	-		EFB2_02103	0.80	+0.4
2,254,395	-		EFB2_02103	0.80	-3.0
2,254,395	-		EFB2_02103	0.80	+0.3
2,254,395	-		EFB2_02103	0.80	+1.1
2,254,395	-		EFB2_02103	0.80	-1.7
2,254,395	-		EFB2_02103	0.80	+0.1
2,254,395	-		EFB2_02103	0.80	-0.1
2,254,432	+				+1.2
2,254,432	+				+0.4
2,254,433	-				-0.8
2,254,448	+				-1.4
2,254,448	+				-1.0
2,254,448	+				+1.3
2,254,448	+				+1.0
2,254,448	+				+0.7
2,254,448	+				+1.6
2,254,448	+				-0.0
2,254,448	+				+1.2
2,254,448	+				+0.5
2,254,448	+				-1.3
2,254,449	-				+1.5
2,254,449	-				-0.3
2,254,449	-				+1.3
2,254,449	-				-2.3
2,254,449	-				+0.1
2,254,449	-				-1.0
2,254,449	-				-0.4
2,254,449	-				-2.6
2,254,456	+				+1.1
2,254,456	+				+1.1
2,254,457	-				+3.2
2,254,457	-				-1.1
2,254,457	-				+0.4
2,254,457	-				+3.0
2,254,457	-				+1.7
2,254,466	+				+0.9
2,254,466	+				-1.2
2,254,467	-				+0.3
2,254,467	-				+0.9
2,254,547	+				-0.3
2,254,547	+				-1.7
2,254,547	+				-1.4
2,254,548	-				-2.5
2,254,548	-				-1.4
2,254,548	-				+0.0
2,254,548	-				-0.6
2,254,548	-				-1.0
2,254,608	+		EFB2_02104	0.16	-1.8
2,254,609	-		EFB2_02104	0.16	+1.4
2,254,609	-		EFB2_02104	0.16	-0.9
2,254,609	-		EFB2_02104	0.16	+2.7
2,254,609	-		EFB2_02104	0.16	+0.6
2,254,609	-		EFB2_02104	0.16	+3.5
2,254,698	+		EFB2_02104	0.26	+1.0
2,254,698	+		EFB2_02104	0.26	+0.8
2,254,698	+		EFB2_02104	0.26	-1.4
2,254,698	+		EFB2_02104	0.26	+1.3
2,254,698	+		EFB2_02104	0.26	+0.4
2,254,698	+		EFB2_02104	0.26	+0.6
2,254,698	+		EFB2_02104	0.26	+1.0
2,254,699	-		EFB2_02104	0.26	+2.1
2,254,699	-		EFB2_02104	0.26	-1.6
2,254,699	-		EFB2_02104	0.26	+0.4
2,254,779	+		EFB2_02104	0.35	+0.8
2,254,798	+		EFB2_02104	0.37	+1.0
2,254,799	-		EFB2_02104	0.37	-0.5
2,254,813	+		EFB2_02104	0.39	-1.6
2,254,813	+		EFB2_02104	0.39	+1.9
2,254,831	+		EFB2_02104	0.41	+0.9
2,254,831	+		EFB2_02104	0.41	-0.3
2,254,831	+		EFB2_02104	0.41	+0.4
2,254,831	+		EFB2_02104	0.41	+0.0
2,254,831	+		EFB2_02104	0.41	-0.4
2,254,831	+		EFB2_02104	0.41	+0.1
2,254,831	+		EFB2_02104	0.41	+1.3
2,254,832	-		EFB2_02104	0.41	-1.7
2,254,832	-		EFB2_02104	0.41	-0.5
2,254,832	-		EFB2_02104	0.41	+1.0
2,254,832	-		EFB2_02104	0.41	+0.9
2,254,840	+		EFB2_02104	0.42	+3.4
2,254,853	-		EFB2_02104	0.44	-1.3
2,254,853	-		EFB2_02104	0.44	+0.4
2,254,853	-		EFB2_02104	0.44	-0.3
2,254,918	+		EFB2_02104	0.51	+0.5
2,254,918	+		EFB2_02104	0.51	+0.1
2,254,919	-		EFB2_02104	0.51	-0.4
2,254,919	-		EFB2_02104	0.51	+0.8
2,254,919	-		EFB2_02104	0.51	+1.3
2,254,965	+		EFB2_02104	0.56	-0.4
2,254,965	+		EFB2_02104	0.56	+1.6
2,254,965	+		EFB2_02104	0.56	-0.1
2,254,966	-		EFB2_02104	0.57	+1.2
2,254,984	+		EFB2_02104	0.59	-0.9
2,254,984	+		EFB2_02104	0.59	+2.6
2,254,984	+		EFB2_02104	0.59	-0.1
2,254,984	+		EFB2_02104	0.59	-0.9
2,254,984	+		EFB2_02104	0.59	-0.9
2,254,984	+		EFB2_02104	0.59	+0.8
2,254,984	+		EFB2_02104	0.59	+0.3
2,254,984	+		EFB2_02104	0.59	-0.3
2,254,984	+		EFB2_02104	0.59	-2.0
2,254,984	+		EFB2_02104	0.59	-0.1
2,254,984	+		EFB2_02104	0.59	-0.3
2,254,984	+		EFB2_02104	0.59	-1.3
2,254,984	+		EFB2_02104	0.59	-0.7
2,254,984	+		EFB2_02104	0.59	+1.1
2,254,984	+		EFB2_02104	0.59	-2.5
2,254,984	+		EFB2_02104	0.59	-1.3
2,254,984	+		EFB2_02104	0.59	-1.1
2,254,984	+		EFB2_02104	0.59	+0.1
2,254,984	+		EFB2_02104	0.59	+0.9
2,254,985	-		EFB2_02104	0.59	-0.6
2,254,985	-		EFB2_02104	0.59	-0.2
2,254,985	-		EFB2_02104	0.59	-0.0
2,254,985	-		EFB2_02104	0.59	-0.9
2,254,985	-		EFB2_02104	0.59	+1.8
2,254,985	-		EFB2_02104	0.59	-3.1
2,254,985	-		EFB2_02104	0.59	+1.1
2,254,985	-		EFB2_02104	0.59	-0.5
2,254,985	-		EFB2_02104	0.59	+1.6
2,254,985	-		EFB2_02104	0.59	-0.3
2,254,985	-		EFB2_02104	0.59	-2.6
2,254,985	-		EFB2_02104	0.59	-0.4
2,254,985	-		EFB2_02104	0.59	+0.9
2,254,985	-		EFB2_02104	0.59	-2.3
2,255,020	+		EFB2_02104	0.63	+1.0
2,255,020	+		EFB2_02104	0.63	+3.1
2,255,092	+		EFB2_02104	0.71	+0.6
2,255,092	+		EFB2_02104	0.71	+0.8
2,255,093	-		EFB2_02104	0.71	+0.8
2,255,093	-		EFB2_02104	0.71	-0.0
2,255,093	-		EFB2_02104	0.71	-1.8
2,255,093	-		EFB2_02104	0.71	+1.9
2,255,128	+		EFB2_02104	0.75	-0.8
2,255,129	-		EFB2_02104	0.75	-0.2
2,255,135	+		EFB2_02104	0.76	-2.1
2,255,135	+		EFB2_02104	0.76	+0.7
2,255,135	+		EFB2_02104	0.76	-0.9
2,255,135	+		EFB2_02104	0.76	+0.4
2,255,136	-		EFB2_02104	0.76	+0.3
2,255,151	+		EFB2_02104	0.78	+1.5
2,255,151	+		EFB2_02104	0.78	-0.3
2,255,151	+		EFB2_02104	0.78	+2.0
2,255,152	-		EFB2_02104	0.78	+0.9
2,255,179	+		EFB2_02104	0.81	-2.3
2,255,179	+		EFB2_02104	0.81	-2.4
2,255,179	+		EFB2_02104	0.81	+0.1
2,255,179	+		EFB2_02104	0.81	-1.0
2,255,179	+		EFB2_02104	0.81	+0.1
2,255,179	+		EFB2_02104	0.81	-0.5
2,255,179	+		EFB2_02104	0.81	+1.0
2,255,180	-		EFB2_02104	0.81	+0.3
2,255,180	-		EFB2_02104	0.81	-0.9
2,255,180	-		EFB2_02104	0.81	-1.4
2,255,180	-		EFB2_02104	0.81	-0.7
2,255,180	-		EFB2_02104	0.81	-0.2
2,255,207	+		EFB2_02104	0.84	+1.5
2,255,208	-		EFB2_02104	0.84	+1.4
2,255,208	-		EFB2_02104	0.84	-0.0
2,255,208	-		EFB2_02104	0.84	-1.2
2,255,208	-		EFB2_02104	0.84	-1.8
2,255,208	-		EFB2_02104	0.84	+1.0
2,255,217	+		EFB2_02104	0.85	-1.3
2,255,272	+				-0.3
2,255,272	+				+0.4
2,255,273	-				+0.2
2,255,289	+				-1.1
2,255,289	+				-2.2
2,255,290	-				+0.4
2,255,290	-				-2.3
2,255,290	-				+2.3
2,255,371	+				-1.6
2,255,371	+				-1.2
2,255,372	-				-0.7
2,255,388	+				-0.1
2,255,389	-				-0.7
2,255,431	+		EFB2_02105	0.22	+2.0
2,255,473	+		EFB2_02105	0.34	-0.3
2,255,509	+		EFB2_02105	0.44	+1.1
2,255,509	+		EFB2_02105	0.44	-0.6
2,255,509	+		EFB2_02105	0.44	-0.1
2,255,509	+		EFB2_02105	0.44	+0.7
2,255,510	-		EFB2_02105	0.45	+1.8
2,255,510	-		EFB2_02105	0.45	-1.0
2,255,510	-		EFB2_02105	0.45	-1.6
2,255,510	-		EFB2_02105	0.45	+0.5
2,255,510	-		EFB2_02105	0.45	+1.4
2,255,510	-		EFB2_02105	0.45	+0.6
2,255,519	+		EFB2_02105	0.47	-3.9
2,255,519	+		EFB2_02105	0.47	+1.4
2,255,519	+		EFB2_02105	0.47	-0.7
2,255,519	+		EFB2_02105	0.47	-0.0
2,255,519	+		EFB2_02105	0.47	-0.4
2,255,519	+		EFB2_02105	0.47	-2.3
2,255,519	+		EFB2_02105	0.47	-0.6
2,255,519	+		EFB2_02105	0.47	-0.9
2,255,519	+		EFB2_02105	0.47	-1.1
2,255,519	+		EFB2_02105	0.47	+0.1
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