Strain Fitness in Escherichia fergusonii Becca around EFB2_01246

Experiment: BHIS_CaCl2 no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community
1,294,147	-				+0.6
1,294,148	+				-0.3
1,294,148	+				+0.0
1,294,148	+				-0.4
1,294,149	-				-0.6
1,294,149	-				+0.2
1,294,149	-				+0.6
1,294,149	-				-0.4
1,294,179	+				-1.4
1,294,180	-				+0.0
1,294,180	-				-1.7
1,294,310	-		EFB2_01244	0.25	-1.7
1,294,310	-		EFB2_01244	0.25	+0.7
1,294,310	-		EFB2_01244	0.25	-1.0
1,294,310	-		EFB2_01244	0.25	-0.2
1,294,310	-		EFB2_01244	0.25	-0.6
1,294,310	-		EFB2_01244	0.25	-0.2
1,294,439	-		EFB2_01244	0.49	+0.3
1,294,439	-		EFB2_01244	0.49	+0.9
1,294,439	-		EFB2_01244	0.49	+0.1
1,294,439	-		EFB2_01244	0.49	-2.0
1,294,604	-		EFB2_01244	0.80	-0.3
1,294,604	-		EFB2_01244	0.80	+0.6
1,294,604	-		EFB2_01244	0.80	-3.1
1,294,604	-		EFB2_01244	0.80	+2.4
1,294,604	-		EFB2_01244	0.80	+0.7
1,294,604	-		EFB2_01244	0.80	+0.5
1,294,604	-		EFB2_01244	0.80	-0.4
1,294,604	-		EFB2_01244	0.80	-0.4
1,294,604	-		EFB2_01244	0.80	+0.1
1,294,604	-		EFB2_01244	0.80	+1.2
1,294,604	-		EFB2_01244	0.80	+1.7
1,294,639	-		EFB2_01244	0.87	-2.0
1,294,693	+				-1.1
1,294,702	+				-0.0
1,294,702	+				-2.3
1,294,703	-				-0.3
1,294,703	-				-2.5
1,294,703	-				-1.1
1,294,703	-				-1.0
1,294,764	+				-1.6
1,294,764	+				+0.4
1,294,764	+				+1.9
1,294,764	+				+0.1
1,294,764	+				-1.6
1,294,765	-				-1.7
1,294,765	-				+0.3
1,294,765	-				-3.3
1,294,770	+				-0.2
1,294,770	+				+2.1
1,294,770	+				-0.9
1,294,771	-				+0.2
1,294,771	-				-3.4
1,294,771	-				-0.1
1,294,771	-				-0.3
1,294,771	-				+0.6
1,294,771	-				-1.5
1,294,771	-				+0.8
1,294,771	-				+0.9
1,294,771	-				+2.8
1,294,771	-				-0.7
1,294,771	-				+1.1
1,294,771	-				+1.9
1,294,771	-				-0.4
1,294,771	-				-1.4
1,294,800	+				-0.7
1,294,800	+				-3.1
1,294,800	+				+0.7
1,294,800	+				-0.4
1,294,800	+				-1.4
1,294,800	+				+1.2
1,294,800	+				+1.1
1,294,800	+				+0.1
1,294,801	-				+1.1
1,294,801	-				-1.4
1,294,801	-				-1.6
1,294,801	-				+0.6
1,294,801	-				+0.3
1,294,801	-				+0.3
1,294,801	-				-0.7
1,294,801	-				+0.6
1,294,801	-				+2.6
1,294,802	+				-1.1
1,294,802	+				-1.6
1,294,802	+				-2.3
1,294,802	+				-0.5
1,294,802	+				-0.9
1,294,802	+				+0.6
1,294,802	+				+1.2
1,294,802	+				-0.8
1,294,802	+				-2.3
1,294,802	+				+0.9
1,294,802	+				+1.4
1,294,802	+				-2.1
1,294,802	+				+0.5
1,294,802	+				-1.1
1,294,802	+				+0.9
1,294,802	+				+0.6
1,294,802	+				+2.3
1,294,802	+				+0.0
1,294,802	+				-3.6
1,294,802	+				-0.9
1,294,802	+				+0.3
1,294,802	+				+0.9
1,294,803	-				-0.0
1,294,803	-				-0.5
1,294,803	-				+1.1
1,294,803	-				+1.2
1,294,803	-				+0.6
1,294,803	-				-1.6
1,294,803	-				+1.2
1,294,803	-				-0.0
1,294,803	-				-1.8
1,294,803	-				+0.6
1,294,803	-				+0.3
1,294,803	-				+0.3
1,294,803	-				-2.1
1,294,803	-				-0.9
1,294,803	-				-1.1
1,294,803	-				-1.0
1,294,803	-				+0.0
1,294,803	-				+0.6
1,294,803	-				-0.7
1,294,803	-				-0.6
1,294,803	-				-0.2
1,294,803	-				+2.2
1,294,803	-				-1.5
1,294,803	-				+1.3
1,294,803	-				+1.0
1,294,803	-				+1.2
1,294,804	+				+0.3
1,294,804	+				+1.9
1,294,804	+				+0.3
1,294,804	+				-2.4
1,294,804	+				-3.4
1,294,804	+				+0.7
1,294,804	+				+0.5
1,294,804	+				+1.3
1,294,804	+				-0.2
1,294,804	+				+1.3
1,294,804	+				-0.2
1,294,804	+				+0.3
1,294,805	-				-2.6
1,294,805	-				-0.6
1,294,805	-				-0.5
1,294,805	-				+1.1
1,294,805	-				-0.5
1,294,805	-				+2.1
1,294,805	-				+1.9
1,294,805	-				-0.3
1,294,805	-				+0.4
1,294,805	-				-1.4
1,294,805	-				+1.6
1,294,805	-				-0.4
1,294,805	-				+2.5
1,294,833	+		EFB2_01245	0.10	+0.3
1,294,833	+		EFB2_01245	0.10	-0.3
1,294,834	-		EFB2_01245	0.10	-0.8
1,294,846	+		EFB2_01245	0.14	+0.1
1,294,846	+		EFB2_01245	0.14	+0.6
1,294,847	-		EFB2_01245	0.14	-4.1
1,294,847	-		EFB2_01245	0.14	+0.1
1,294,847	-		EFB2_01245	0.14	-0.1
1,294,864	+		EFB2_01245	0.19	+0.6
1,294,864	+		EFB2_01245	0.19	+0.4
1,294,864	+		EFB2_01245	0.19	-1.2
1,294,864	+		EFB2_01245	0.19	+0.9
1,294,864	+		EFB2_01245	0.19	+1.6
1,294,865	-		EFB2_01245	0.20	+0.8
1,294,865	-		EFB2_01245	0.20	+0.6
1,294,865	-		EFB2_01245	0.20	+0.4
1,294,865	-		EFB2_01245	0.20	+0.1
1,294,865	-		EFB2_01245	0.20	+0.7
1,294,879	+		EFB2_01245	0.24	+1.9
1,294,880	-		EFB2_01245	0.24	-0.2
1,294,881	+		EFB2_01245	0.24	-1.1
1,294,936	+		EFB2_01245	0.41	+0.5
1,294,936	+		EFB2_01245	0.41	+0.2
1,294,937	-		EFB2_01245	0.41	-1.2
1,294,937	-		EFB2_01245	0.41	+0.4
1,294,937	-		EFB2_01245	0.41	+2.1
1,295,014	+		EFB2_01245	0.64	+1.0
1,295,014	+		EFB2_01245	0.64	+0.7
1,295,014	+		EFB2_01245	0.64	+1.3
1,295,015	-		EFB2_01245	0.64	-1.4
1,295,015	-		EFB2_01245	0.64	-0.7
1,295,015	-		EFB2_01245	0.64	+1.1
1,295,015	-		EFB2_01245	0.64	+2.0
1,295,015	-		EFB2_01245	0.64	-1.1
1,295,015	-		EFB2_01245	0.64	-0.5
1,295,019	-		EFB2_01245	0.65	+0.7
1,295,019	-		EFB2_01245	0.65	+1.0
1,295,019	-		EFB2_01245	0.65	+0.4
1,295,074	-		EFB2_01245	0.82	+1.0
1,295,085	+		EFB2_01245	0.85	+0.7
1,295,085	+		EFB2_01245	0.85	+0.7
1,295,086	-		EFB2_01245	0.85	+0.4
1,295,086	-		EFB2_01245	0.85	-0.4
1,295,127	+				+1.8
1,295,127	+				-0.8
1,295,127	+				-0.2
1,295,127	+				-0.7
1,295,127	+				-1.6
1,295,127	+				+2.2
1,295,127	+				-1.6
1,295,127	+				-2.7
1,295,127	+				-1.1
1,295,127	+				-0.4
1,295,127	+				+0.7
1,295,127	+				+1.0
1,295,128	-				-0.0
1,295,128	-				+1.1
1,295,128	-				+0.9
1,295,128	-				-0.7
1,295,128	-				-0.5
1,295,128	-				-0.2
1,295,128	-				+0.5
1,295,128	-				+1.1
1,295,128	-				-0.5
1,295,128	-				-3.1
1,295,128	-				-2.2
1,295,128	-				-0.9
1,295,128	-				-0.5
1,295,128	-				+0.6
1,295,128	-				-0.5
1,295,128	-				+0.8
1,295,163	+				-2.3
1,295,220	+		EFB2_01246	0.13	-1.3
1,295,220	+		EFB2_01246	0.13	+0.2
1,295,220	+		EFB2_01246	0.13	-1.4
1,295,221	-		EFB2_01246	0.13	-1.4
1,295,247	+		EFB2_01246	0.17	+0.6
1,295,247	+		EFB2_01246	0.17	-0.2
1,295,247	+		EFB2_01246	0.17	+0.1
1,295,248	-		EFB2_01246	0.17	+0.2
1,295,248	-		EFB2_01246	0.17	+2.8
1,295,248	-		EFB2_01246	0.17	+0.8
1,295,248	-		EFB2_01246	0.17	+0.1
1,295,306	+		EFB2_01246	0.25	+0.6
1,295,306	+		EFB2_01246	0.25	+1.0
1,295,306	+		EFB2_01246	0.25	+0.1
1,295,306	+		EFB2_01246	0.25	+0.1
1,295,306	+		EFB2_01246	0.25	+0.1
1,295,307	-		EFB2_01246	0.25	-0.6
1,295,307	-		EFB2_01246	0.25	+0.3
1,295,324	+		EFB2_01246	0.27	-3.5
1,295,324	+		EFB2_01246	0.27	+0.0
1,295,324	+		EFB2_01246	0.27	-0.1
1,295,324	+		EFB2_01246	0.27	-0.7
1,295,324	+		EFB2_01246	0.27	-2.3
1,295,324	+		EFB2_01246	0.27	+0.9
1,295,324	+		EFB2_01246	0.27	+0.4
1,295,324	+		EFB2_01246	0.27	+3.1
1,295,325	-		EFB2_01246	0.27	+1.4
1,295,325	-		EFB2_01246	0.27	-1.1
1,295,325	-		EFB2_01246	0.27	+0.3
1,295,325	-		EFB2_01246	0.27	-0.4
1,295,331	+		EFB2_01246	0.28	+0.2
1,295,331	+		EFB2_01246	0.28	+1.3
1,295,331	+		EFB2_01246	0.28	-1.6
1,295,331	+		EFB2_01246	0.28	-1.0
1,295,331	+		EFB2_01246	0.28	-0.0
1,295,331	+		EFB2_01246	0.28	-0.3
1,295,331	+		EFB2_01246	0.28	-0.6
1,295,331	+		EFB2_01246	0.28	+1.1
1,295,332	-		EFB2_01246	0.28	-0.3
1,295,332	-		EFB2_01246	0.28	+0.3
1,295,332	-		EFB2_01246	0.28	-1.0
1,295,332	-		EFB2_01246	0.28	-0.2
1,295,389	-		EFB2_01246	0.36	+0.3
1,295,389	-		EFB2_01246	0.36	-0.4
1,295,389	-		EFB2_01246	0.36	+0.8
1,295,391	+		EFB2_01246	0.36	+0.3
1,295,391	+		EFB2_01246	0.36	+0.7
1,295,391	+		EFB2_01246	0.36	+1.3
1,295,392	-		EFB2_01246	0.36	+0.4
1,295,396	+		EFB2_01246	0.37	-1.1
1,295,465	+		EFB2_01246	0.46	-1.3
1,295,465	+		EFB2_01246	0.46	-1.8
1,295,465	+		EFB2_01246	0.46	+0.1
1,295,466	-		EFB2_01246	0.46	-3.7
1,295,466	-		EFB2_01246	0.46	+1.4
1,295,473	-		EFB2_01246	0.47	+0.7
1,295,558	+		EFB2_01246	0.59	+1.2
1,295,558	+		EFB2_01246	0.59	-1.8
1,295,559	-		EFB2_01246	0.59	+0.3
1,295,559	-		EFB2_01246	0.59	-0.2
1,295,561	+		EFB2_01246	0.59	+0.4
1,295,567	+		EFB2_01246	0.60	-0.3
1,295,584	+		EFB2_01246	0.62	+2.2
1,295,584	+		EFB2_01246	0.62	+0.3
1,295,585	-		EFB2_01246	0.62	+1.9
1,295,585	-		EFB2_01246	0.62	+0.0
1,295,585	-		EFB2_01246	0.62	+0.2
1,295,585	-		EFB2_01246	0.62	+0.2
1,295,639	+		EFB2_01246	0.70	+0.1
1,295,639	+		EFB2_01246	0.70	-1.4
1,295,639	+		EFB2_01246	0.70	+1.3
1,295,639	+		EFB2_01246	0.70	+1.0
1,295,640	-		EFB2_01246	0.70	+1.0
1,295,640	-		EFB2_01246	0.70	-1.5
1,295,640	-		EFB2_01246	0.70	-1.5
1,295,640	-		EFB2_01246	0.70	-0.3
1,295,640	-		EFB2_01246	0.70	-2.4
1,295,640	-		EFB2_01246	0.70	+0.8
1,295,664	-		EFB2_01246	0.73	+0.4
1,295,689	+		EFB2_01246	0.77	+0.8
1,295,689	+		EFB2_01246	0.77	+0.4
1,295,689	+		EFB2_01246	0.77	-0.3
1,295,689	+		EFB2_01246	0.77	-0.5
1,295,689	+		EFB2_01246	0.77	+0.4
1,295,689	+		EFB2_01246	0.77	+1.0
1,295,690	-		EFB2_01246	0.77	+0.6
1,295,690	-		EFB2_01246	0.77	-1.6
1,295,690	-		EFB2_01246	0.77	-0.7
1,295,690	-		EFB2_01246	0.77	+1.6
1,295,690	-		EFB2_01246	0.77	-0.0
1,295,690	-		EFB2_01246	0.77	-1.0
1,295,690	-		EFB2_01246	0.77	+0.3
1,295,690	-		EFB2_01246	0.77	+0.1
1,295,774	+		EFB2_01246	0.88	+0.3
1,295,775	-		EFB2_01246	0.88	+0.4
1,295,775	-		EFB2_01246	0.88	-1.3
1,295,775	-		EFB2_01246	0.88	+0.7
1,295,775	-		EFB2_01246	0.88	-0.2
1,295,776	+		EFB2_01246	0.88	+0.0
1,295,776	+		EFB2_01246	0.88	-0.0
1,295,776	+		EFB2_01246	0.88	-2.1
1,295,776	+		EFB2_01246	0.88	-1.7
1,295,776	+		EFB2_01246	0.88	+0.5
1,295,776	+		EFB2_01246	0.88	+0.5
1,295,776	+		EFB2_01246	0.88	-0.2
1,295,776	+		EFB2_01246	0.88	-0.7
1,295,776	+		EFB2_01246	0.88	-0.7
1,295,777	-		EFB2_01246	0.88	+0.1
1,295,777	-		EFB2_01246	0.88	+0.8
1,295,777	-		EFB2_01246	0.88	-0.1
1,295,777	-		EFB2_01246	0.88	+1.0
1,295,777	-		EFB2_01246	0.88	+0.7
1,295,777	-		EFB2_01246	0.88	+0.1
1,295,777	-		EFB2_01246	0.88	-1.2
1,295,777	-		EFB2_01246	0.88	+0.2
1,295,777	-		EFB2_01246	0.88	-0.7
1,295,777	-		EFB2_01246	0.88	+0.6
1,295,780	+		EFB2_01246	0.89	+0.6
1,295,780	+		EFB2_01246	0.89	+1.7
1,295,780	+		EFB2_01246	0.89	-0.6
1,295,780	+		EFB2_01246	0.89	+0.4
1,295,780	+		EFB2_01246	0.89	-0.6
1,295,780	+		EFB2_01246	0.89	-1.1
1,295,780	+		EFB2_01246	0.89	-0.8
1,295,780	+		EFB2_01246	0.89	-0.9
1,295,780	+		EFB2_01246	0.89	-0.3
1,295,780	+		EFB2_01246	0.89	+0.5
1,295,780	+		EFB2_01246	0.89	+0.3
1,295,780	+		EFB2_01246	0.89	-0.9
1,295,780	+		EFB2_01246	0.89	+0.3
1,295,780	+		EFB2_01246	0.89	+0.3
1,295,780	+		EFB2_01246	0.89	+0.2
1,295,780	+		EFB2_01246	0.89	+1.4
1,295,780	+		EFB2_01246	0.89	-0.2
1,295,780	+		EFB2_01246	0.89	-1.4
1,295,780	+		EFB2_01246	0.89	+0.7
1,295,780	+		EFB2_01246	0.89	+0.9
1,295,780	+		EFB2_01246	0.89	-0.5
1,295,780	+		EFB2_01246	0.89	-1.4
1,295,780	+		EFB2_01246	0.89	-0.2
1,295,780	+		EFB2_01246	0.89	+0.3
1,295,781	-		EFB2_01246	0.89	+1.2
1,295,781	-		EFB2_01246	0.89	+1.0
1,295,781	-		EFB2_01246	0.89	+1.3
1,295,781	-		EFB2_01246	0.89	-0.9
1,295,781	-		EFB2_01246	0.89	-0.8
1,295,781	-		EFB2_01246	0.89	-0.8
1,295,781	-		EFB2_01246	0.89	+0.7
1,295,781	-		EFB2_01246	0.89	-2.7
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