Strain Fitness in Escherichia fergusonii Becca around EFB2_01193

Experiment: BHIS_CaCl2 no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community
1,250,080	+		EFB2_01192	0.56	-1.6
1,250,081	-		EFB2_01192	0.56	-0.2
1,250,135	+		EFB2_01192	0.59	+0.1
1,250,135	+		EFB2_01192	0.59	+0.9
1,250,135	+		EFB2_01192	0.59	+0.3
1,250,135	+		EFB2_01192	0.59	-1.3
1,250,135	+		EFB2_01192	0.59	-0.7
1,250,136	-		EFB2_01192	0.59	-0.2
1,250,143	+		EFB2_01192	0.59	-2.8
1,250,144	-		EFB2_01192	0.59	+1.6
1,250,144	-		EFB2_01192	0.59	-2.3
1,250,166	+		EFB2_01192	0.60	-1.4
1,250,166	+		EFB2_01192	0.60	-0.3
1,250,167	-		EFB2_01192	0.60	-1.1
1,250,167	-		EFB2_01192	0.60	+0.1
1,250,184	+		EFB2_01192	0.61	+2.6
1,250,184	+		EFB2_01192	0.61	-0.4
1,250,257	-		EFB2_01192	0.65	-0.2
1,250,257	-		EFB2_01192	0.65	+1.5
1,250,257	-		EFB2_01192	0.65	+0.1
1,250,264	+		EFB2_01192	0.65	-0.7
1,250,264	+		EFB2_01192	0.65	-2.8
1,250,264	+		EFB2_01192	0.65	+0.9
1,250,264	+		EFB2_01192	0.65	-2.1
1,250,265	-		EFB2_01192	0.65	-2.5
1,250,265	-		EFB2_01192	0.65	-1.3
1,250,265	-		EFB2_01192	0.65	-3.4
1,250,265	-		EFB2_01192	0.65	+0.7
1,250,265	-		EFB2_01192	0.65	+0.0
1,250,276	+		EFB2_01192	0.66	+0.6
1,250,276	+		EFB2_01192	0.66	+0.1
1,250,276	+		EFB2_01192	0.66	-0.4
1,250,276	+		EFB2_01192	0.66	+0.5
1,250,276	+		EFB2_01192	0.66	+0.5
1,250,276	+		EFB2_01192	0.66	-1.4
1,250,276	+		EFB2_01192	0.66	-0.6
1,250,276	+		EFB2_01192	0.66	-0.6
1,250,276	+		EFB2_01192	0.66	+0.6
1,250,276	+		EFB2_01192	0.66	+1.2
1,250,277	-		EFB2_01192	0.66	-1.3
1,250,277	-		EFB2_01192	0.66	+0.5
1,250,277	-		EFB2_01192	0.66	-2.5
1,250,277	-		EFB2_01192	0.66	-1.1
1,250,277	-		EFB2_01192	0.66	+0.2
1,250,277	-		EFB2_01192	0.66	+0.1
1,250,277	-		EFB2_01192	0.66	+0.1
1,250,277	-		EFB2_01192	0.66	+0.5
1,250,277	-		EFB2_01192	0.66	-0.7
1,250,277	-		EFB2_01192	0.66	+0.8
1,250,277	-		EFB2_01192	0.66	+1.0
1,250,277	-		EFB2_01192	0.66	-1.3
1,250,277	-		EFB2_01192	0.66	+0.3
1,250,295	+		EFB2_01192	0.67	+0.7
1,250,295	+		EFB2_01192	0.67	+0.9
1,250,308	+		EFB2_01192	0.67	+0.1
1,250,308	+		EFB2_01192	0.67	-0.6
1,250,308	+		EFB2_01192	0.67	+1.3
1,250,308	+		EFB2_01192	0.67	-0.7
1,250,309	-		EFB2_01192	0.67	-0.9
1,250,325	-		EFB2_01192	0.68	+0.3
1,250,339	+		EFB2_01192	0.69	-0.8
1,250,339	+		EFB2_01192	0.69	+0.5
1,250,339	+		EFB2_01192	0.69	-0.4
1,250,339	+		EFB2_01192	0.69	+0.3
1,250,339	+		EFB2_01192	0.69	-0.8
1,250,339	+		EFB2_01192	0.69	-0.4
1,250,339	+		EFB2_01192	0.69	-0.5
1,250,339	+		EFB2_01192	0.69	+1.0
1,250,340	-		EFB2_01192	0.69	+0.4
1,250,340	-		EFB2_01192	0.69	+0.3
1,250,340	-		EFB2_01192	0.69	+0.3
1,250,340	-		EFB2_01192	0.69	-0.1
1,250,340	-		EFB2_01192	0.69	+1.2
1,250,340	-		EFB2_01192	0.69	+0.2
1,250,340	-		EFB2_01192	0.69	+0.2
1,250,342	+		EFB2_01192	0.69	-0.9
1,250,342	+		EFB2_01192	0.69	+0.5
1,250,342	+		EFB2_01192	0.69	+0.4
1,250,342	+		EFB2_01192	0.69	-2.0
1,250,342	+		EFB2_01192	0.69	-2.8
1,250,342	+		EFB2_01192	0.69	-0.2
1,250,342	+		EFB2_01192	0.69	-3.2
1,250,343	-		EFB2_01192	0.69	+0.3
1,250,343	-		EFB2_01192	0.69	+0.3
1,250,407	-		EFB2_01192	0.72	-0.9
1,250,434	-		EFB2_01192	0.73	+0.8
1,250,449	+		EFB2_01192	0.74	+0.4
1,250,449	+		EFB2_01192	0.74	-0.9
1,250,449	+		EFB2_01192	0.74	-1.3
1,250,449	+		EFB2_01192	0.74	+1.3
1,250,450	-		EFB2_01192	0.74	+0.3
1,250,450	-		EFB2_01192	0.74	+2.4
1,250,450	-		EFB2_01192	0.74	+3.8
1,250,459	+		EFB2_01192	0.75	+0.1
1,250,459	+		EFB2_01192	0.75	+1.3
1,250,459	+		EFB2_01192	0.75	-0.8
1,250,460	-		EFB2_01192	0.75	+2.6
1,250,460	-		EFB2_01192	0.75	+0.6
1,250,521	-		EFB2_01192	0.77	+0.3
1,250,521	-		EFB2_01192	0.77	+0.4
1,250,521	-		EFB2_01192	0.77	-1.3
1,250,521	-		EFB2_01192	0.77	-1.6
1,250,521	-		EFB2_01192	0.77	+0.3
1,250,521	-		EFB2_01192	0.77	-1.6
1,250,521	-		EFB2_01192	0.77	-0.9
1,250,521	-		EFB2_01192	0.77	-0.1
1,250,521	-		EFB2_01192	0.77	+0.8
1,250,571	-		EFB2_01192	0.80	+0.0
1,250,578	-		EFB2_01192	0.80	-0.7
1,250,578	-		EFB2_01192	0.80	-2.6
1,250,598	+		EFB2_01192	0.81	+1.5
1,250,598	+		EFB2_01192	0.81	+0.1
1,250,599	-		EFB2_01192	0.81	-2.3
1,250,630	+		EFB2_01192	0.83	+0.4
1,250,630	+		EFB2_01192	0.83	-2.6
1,250,631	-		EFB2_01192	0.83	-0.8
1,250,631	-		EFB2_01192	0.83	-0.6
1,250,648	+		EFB2_01192	0.84	+1.1
1,250,649	-		EFB2_01192	0.84	-0.4
1,250,650	+		EFB2_01192	0.84	+0.2
1,250,650	+		EFB2_01192	0.84	-2.6
1,250,650	+		EFB2_01192	0.84	-3.0
1,250,650	+		EFB2_01192	0.84	-1.5
1,250,650	+		EFB2_01192	0.84	+2.1
1,250,650	+		EFB2_01192	0.84	+0.1
1,250,650	+		EFB2_01192	0.84	+1.1
1,250,651	-		EFB2_01192	0.84	+0.6
1,250,651	-		EFB2_01192	0.84	+0.3
1,250,651	-		EFB2_01192	0.84	-0.3
1,250,651	-		EFB2_01192	0.84	+0.2
1,250,696	+		EFB2_01192	0.86	-0.4
1,250,697	-		EFB2_01192	0.86	-2.4
1,250,697	-		EFB2_01192	0.86	-1.7
1,250,707	+		EFB2_01192	0.86	+0.5
1,250,707	+		EFB2_01192	0.86	-2.4
1,250,707	+		EFB2_01192	0.86	-1.1
1,250,707	+		EFB2_01192	0.86	+0.1
1,250,707	+		EFB2_01192	0.86	-0.6
1,250,707	+		EFB2_01192	0.86	+1.4
1,250,707	+		EFB2_01192	0.86	-0.6
1,250,707	+		EFB2_01192	0.86	+1.3
1,250,707	+		EFB2_01192	0.86	-0.0
1,250,707	+		EFB2_01192	0.86	+0.7
1,250,707	+		EFB2_01192	0.86	+0.9
1,250,707	+		EFB2_01192	0.86	-1.8
1,250,707	+		EFB2_01192	0.86	-0.3
1,250,707	+		EFB2_01192	0.86	-0.0
1,250,707	+		EFB2_01192	0.86	+0.9
1,250,707	+		EFB2_01192	0.86	+0.0
1,250,707	+		EFB2_01192	0.86	-0.1
1,250,707	+		EFB2_01192	0.86	-1.8
1,250,707	+		EFB2_01192	0.86	-2.1
1,250,707	+		EFB2_01192	0.86	-1.7
1,250,707	+		EFB2_01192	0.86	+0.4
1,250,707	+		EFB2_01192	0.86	-1.9
1,250,707	+		EFB2_01192	0.86	+0.4
1,250,707	+		EFB2_01192	0.86	+1.4
1,250,708	-		EFB2_01192	0.86	-0.4
1,250,708	-		EFB2_01192	0.86	+1.6
1,250,708	-		EFB2_01192	0.86	+0.6
1,250,708	-		EFB2_01192	0.86	-0.2
1,250,708	-		EFB2_01192	0.86	-0.6
1,250,708	-		EFB2_01192	0.86	+0.7
1,250,708	-		EFB2_01192	0.86	-2.4
1,250,708	-		EFB2_01192	0.86	-0.6
1,250,708	-		EFB2_01192	0.86	-0.7
1,250,708	-		EFB2_01192	0.86	-0.4
1,250,708	-		EFB2_01192	0.86	-0.6
1,250,708	-		EFB2_01192	0.86	+0.3
1,250,708	-		EFB2_01192	0.86	-1.4
1,250,708	-		EFB2_01192	0.86	-0.5
1,250,708	-		EFB2_01192	0.86	-1.3
1,250,708	-		EFB2_01192	0.86	-1.8
1,250,708	-		EFB2_01192	0.86	+0.8
1,250,708	-		EFB2_01192	0.86	+0.9
1,250,708	-		EFB2_01192	0.86	-0.5
1,250,708	-		EFB2_01192	0.86	+0.9
1,250,708	-		EFB2_01192	0.86	-1.6
1,250,708	-		EFB2_01192	0.86	+1.1
1,250,712	+		EFB2_01192	0.87	-2.1
1,250,712	+		EFB2_01192	0.87	+0.8
1,250,771	+		EFB2_01192	0.90	+1.6
1,250,771	+		EFB2_01192	0.90	-2.2
1,250,771	+		EFB2_01192	0.90	+0.1
1,250,771	+		EFB2_01192	0.90	-0.1
1,250,771	+		EFB2_01192	0.90	+0.9
1,250,771	+		EFB2_01192	0.90	-1.0
1,250,772	-		EFB2_01192	0.90	-1.5
1,250,772	-		EFB2_01192	0.90	-0.0
1,250,775	+		EFB2_01192	0.90	-0.2
1,250,775	+		EFB2_01192	0.90	-2.8
1,250,775	+		EFB2_01192	0.90	+1.2
1,250,776	-		EFB2_01192	0.90	-1.3
1,250,776	-		EFB2_01192	0.90	+0.2
1,250,804	+				-0.9
1,250,804	+				-1.1
1,250,804	+				+0.7
1,250,804	+				+1.7
1,250,804	+				+0.6
1,250,804	+				-0.8
1,250,805	-				-1.9
1,250,805	-				-0.9
1,250,805	-				+0.1
1,250,807	+				-0.9
1,250,807	+				-1.4
1,250,807	+				-2.1
1,250,807	+				-0.5
1,250,807	+				+2.4
1,250,808	-				+2.7
1,250,808	-				+0.3
1,250,808	-				-0.2
1,250,808	-				-1.0
1,250,875	+				-0.1
1,250,875	+				-1.9
1,250,876	-				-1.2
1,250,876	-				-0.4
1,250,926	+				+1.4
1,250,926	+				-0.5
1,250,926	+				-0.9
1,250,926	+				+1.4
1,250,926	+				-0.6
1,250,927	-				+2.1
1,250,927	-				-0.6
1,250,927	-				+0.9
1,250,927	-				+0.9
1,250,927	-				+0.4
1,250,979	+				-0.3
1,250,979	+				-0.2
1,250,979	+				+1.8
1,250,979	+				+0.2
1,250,979	+				+0.2
1,250,979	+				+2.1
1,250,979	+				+0.0
1,250,979	+				-0.8
1,250,979	+				-1.3
1,250,979	+				+0.4
1,250,979	+				+1.9
1,250,979	+				-1.8
1,250,979	+				-0.8
1,250,979	+				+0.5
1,250,979	+				+0.2
1,250,979	+				+0.6
1,250,979	+				-0.3
1,250,979	+				-0.9
1,250,979	+				+0.7
1,250,979	+				+0.5
1,250,979	+				+0.7
1,250,979	+				-0.8
1,250,979	+				-0.1
1,250,979	+				+0.5
1,250,979	+				-1.5
1,250,979	+				-0.1
1,250,980	-				-1.2
1,250,980	-				+0.4
1,250,980	-				-2.0
1,250,980	-				-1.5
1,250,980	-				+0.4
1,250,980	-				+0.5
1,250,980	-				-0.2
1,250,980	-				+0.1
1,250,980	-				-0.1
1,250,980	-				+0.5
1,250,980	-				+0.6
1,250,980	-				-1.1
1,250,980	-				-0.5
1,250,980	-				-0.8
1,250,980	-				+1.4
1,250,980	-				+0.7
1,250,980	-				-0.8
1,250,980	-				+1.1
1,250,980	-				+0.7
1,250,980	-				+0.5
1,250,980	-				+2.5
1,250,980	-				-0.4
1,250,980	-				+1.5
1,250,980	-				+1.1
1,250,980	-				-2.6
1,250,980	-				+0.6
1,250,980	-				+1.6
1,250,980	-				+0.7
1,250,980	-				+1.3
1,250,980	-				-0.0
1,250,981	+				+0.2
1,250,981	+				-1.6
1,250,981	+				+0.5
1,250,981	+				+0.4
1,250,981	+				-0.3
1,250,981	+				-0.4
1,250,981	+				+1.7
1,250,981	+				-0.6
1,250,982	-				-0.2
1,250,982	-				-0.9
1,250,982	-				-0.3
1,250,982	-				-0.5
1,250,982	-				+0.5
1,250,982	-				-0.0
1,250,991	+				+0.6
1,250,991	+				+1.1
1,250,992	-				+0.4
1,250,992	-				+0.1
1,251,037	+				+0.3
1,251,037	+				+1.2
1,251,037	+				+0.2
1,251,037	+				-0.0
1,251,037	+				-1.2
1,251,037	+				-1.5
1,251,037	+				+0.8
1,251,037	+				-1.4
1,251,037	+				-1.5
1,251,038	-				-0.8
1,251,038	-				-2.2
1,251,038	-				-0.8
1,251,038	-				-2.2
1,251,038	-				+1.2
1,251,038	-				-0.4
1,251,038	-				-1.9
1,251,038	-				+0.4
1,251,041	+				-1.4
1,251,041	+				+0.3
1,251,041	+				+1.1
1,251,041	+				-0.3
1,251,041	+				+0.0
1,251,041	+				-1.1
1,251,041	+				-0.6
1,251,041	+				+1.8
1,251,041	+				-0.5
1,251,041	+				+0.6
1,251,041	+				+1.5
1,251,041	+				+0.2
1,251,041	+				+0.2
1,251,042	-				+2.4
1,251,042	-				-0.3
1,251,042	-				+0.7
1,251,042	-				+0.7
1,251,042	-				-0.1
1,251,042	-				-1.6
1,251,042	-				-1.8
1,251,042	-				-2.3
1,251,042	-				-0.9
1,251,042	-				-0.3
1,251,042	-				+0.4
1,251,042	-				-2.5
1,251,042	-				-0.1
1,251,042	-				+1.3
1,251,042	-				+1.4
1,251,043	+				-3.4
1,251,043	+				+2.1
1,251,043	+				+0.2
1,251,043	+				+0.7
1,251,043	+				+0.4
1,251,043	+				-0.1
1,251,043	+				+0.0
1,251,043	+				-3.8
1,251,043	+				+0.8
1,251,044	-				+3.6
1,251,044	-				+0.3
1,251,044	-				+0.5
1,251,044	-				-1.3
1,251,044	-				-1.6
1,251,044	-				+0.2
1,251,044	-				-0.3
1,251,044	-				+0.5
1,251,052	+				-1.6
1,251,052	+				+0.2
1,251,053	-				-1.1
1,251,060	+				-1.4
1,251,061	-				-0.6
1,251,063	+				+0.6
1,251,064	-				-1.1
1,251,064	-				-0.5
1,251,064	-				-0.0
1,251,064	-				-0.1
1,251,064	-				-1.4
1,251,064	-				-2.8
1,251,064	-				+1.2
1,251,068	+				+0.8
1,251,068	+				+0.1
1,251,068	+				-0.1
1,251,068	+				+0.5
1,251,068	+				-2.1
1,251,068	+				+1.0
1,251,068	+				-2.8
1,251,068	+				+1.5
1,251,068	+				-0.0
1,251,068	+				+1.2
1,251,068	+				-0.2
1,251,068	+				+0.9
1,251,068	+				+0.3
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1,252,959	+		EFB2_01194	0.79	+0.6
1,252,959	+		EFB2_01194	0.79	-1.3
1,252,959	+		EFB2_01194	0.79	-0.7
1,252,959	+		EFB2_01194	0.79	+1.6
1,252,972	+		EFB2_01194	0.80	+1.5
1,252,972	+		EFB2_01194	0.80	+1.4
1,253,002	-		EFB2_01194	0.83	+1.0
1,253,059	-		EFB2_01194	0.88	+0.9
1,253,059	-		EFB2_01194	0.88	-0.9