Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02374

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02372 and MPMX26_02373 are separated by 208 nucleotidesMPMX26_02373 and MPMX26_02374 are separated by 83 nucleotidesMPMX26_02374 and MPMX26_02375 overlap by 14 nucleotides MPMX26_02372: MPMX26_02372 - hypothetical protein, at 2,456,135 to 2,456,752 _02372 MPMX26_02373: MPMX26_02373 - Quercetin 2,3-dioxygenase, at 2,456,961 to 2,457,647 _02373 MPMX26_02374: MPMX26_02374 - Copper resistance protein B, at 2,457,731 to 2,458,561 _02374 MPMX26_02375: MPMX26_02375 - Copper resistance protein A, at 2,458,548 to 2,460,371 _02375 Position (kb) 2457 2458 2459Strain fitness (log2 ratio) -1 0 1 2 3 4at 2456.940 kb on - strandat 2457.210 kb on + strand, within MPMX26_02373at 2457.258 kb on + strand, within MPMX26_02373at 2457.258 kb on + strand, within MPMX26_02373at 2457.285 kb on + strand, within MPMX26_02373at 2457.351 kb on + strand, within MPMX26_02373at 2457.356 kb on + strand, within MPMX26_02373at 2457.360 kb on + strand, within MPMX26_02373at 2457.361 kb on + strand, within MPMX26_02373at 2457.435 kb on + strand, within MPMX26_02373at 2457.449 kb on + strand, within MPMX26_02373at 2457.449 kb on + strand, within MPMX26_02373at 2457.449 kb on + strand, within MPMX26_02373at 2457.500 kb on + strand, within MPMX26_02373at 2457.500 kb on + strand, within MPMX26_02373at 2457.500 kb on + strand, within MPMX26_02373at 2457.500 kb on + strand, within MPMX26_02373at 2457.506 kb on + strand, within MPMX26_02373at 2457.525 kb on + strand, within MPMX26_02373at 2457.525 kb on + strand, within MPMX26_02373at 2457.600 kb on + strandat 2457.832 kb on - strand, within MPMX26_02374at 2458.132 kb on + strand, within MPMX26_02374at 2458.492 kb on + strandat 2458.500 kb on - strandat 2458.547 kb on - strandat 2459.180 kb on - strand, within MPMX26_02375at 2459.252 kb on - strand, within MPMX26_02375at 2459.308 kb on + strand, within MPMX26_02375

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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2,456,940 - +1.5
2,457,210 + MPMX26_02373 0.36 +0.5
2,457,258 + MPMX26_02373 0.43 -0.3
2,457,258 + MPMX26_02373 0.43 +0.8
2,457,285 + MPMX26_02373 0.47 +1.0
2,457,351 + MPMX26_02373 0.57 -0.5
2,457,356 + MPMX26_02373 0.57 +1.4
2,457,360 + MPMX26_02373 0.58 +0.4
2,457,361 + MPMX26_02373 0.58 +2.4
2,457,435 + MPMX26_02373 0.69 +1.4
2,457,449 + MPMX26_02373 0.71 +2.5
2,457,449 + MPMX26_02373 0.71 +1.2
2,457,449 + MPMX26_02373 0.71 +0.7
2,457,500 + MPMX26_02373 0.78 -0.1
2,457,500 + MPMX26_02373 0.78 +0.6
2,457,500 + MPMX26_02373 0.78 -0.1
2,457,500 + MPMX26_02373 0.78 -0.5
2,457,506 + MPMX26_02373 0.79 +2.4
2,457,525 + MPMX26_02373 0.82 -0.1
2,457,525 + MPMX26_02373 0.82 +1.1
2,457,600 + +0.4
2,457,832 - MPMX26_02374 0.12 +2.7
2,458,132 + MPMX26_02374 0.48 +0.6
2,458,492 + +3.8
2,458,500 - +2.8
2,458,547 - +1.6
2,459,180 - MPMX26_02375 0.35 +0.5
2,459,252 - MPMX26_02375 0.39 -0.0
2,459,308 + MPMX26_02375 0.42 +0.8

Or see this region's nucleotide sequence