Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02247

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02246 and MPMX26_02247 are separated by 175 nucleotidesMPMX26_02247 and MPMX26_02248 are separated by 36 nucleotides MPMX26_02246: MPMX26_02246 - Amino-acid permease RocC, at 2,310,483 to 2,311,970 _02246 MPMX26_02247: MPMX26_02247 - Succinylglutamate desuccinylase, at 2,312,146 to 2,313,120 _02247 MPMX26_02248: MPMX26_02248 - N-succinylarginine dihydrolase, at 2,313,157 to 2,314,494 _02248 Position (kb) 2312 2313 2314Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2311.538 kb on - strand, within MPMX26_02246at 2311.607 kb on - strand, within MPMX26_02246at 2312.530 kb on - strand, within MPMX26_02247at 2312.685 kb on - strand, within MPMX26_02247at 2312.740 kb on - strand, within MPMX26_02247at 2312.741 kb on - strand, within MPMX26_02247at 2312.806 kb on - strand, within MPMX26_02247at 2312.866 kb on - strand, within MPMX26_02247at 2313.057 kb on - strandat 2313.193 kb on - strandat 2313.223 kb on - strandat 2313.280 kb on - strandat 2313.280 kb on - strandat 2313.280 kb on - strandat 2313.310 kb on - strand, within MPMX26_02248at 2313.310 kb on - strand, within MPMX26_02248at 2313.310 kb on - strand, within MPMX26_02248at 2313.413 kb on + strand, within MPMX26_02248at 2313.421 kb on - strand, within MPMX26_02248at 2313.421 kb on - strand, within MPMX26_02248at 2313.439 kb on - strand, within MPMX26_02248at 2313.439 kb on - strand, within MPMX26_02248at 2313.457 kb on - strand, within MPMX26_02248at 2313.499 kb on - strand, within MPMX26_02248at 2313.499 kb on - strand, within MPMX26_02248at 2313.499 kb on - strand, within MPMX26_02248at 2313.534 kb on - strand, within MPMX26_02248at 2313.534 kb on - strand, within MPMX26_02248at 2313.534 kb on - strand, within MPMX26_02248at 2313.543 kb on - strand, within MPMX26_02248at 2313.555 kb on - strand, within MPMX26_02248at 2313.555 kb on - strand, within MPMX26_02248at 2313.555 kb on - strand, within MPMX26_02248at 2313.555 kb on - strand, within MPMX26_02248at 2313.555 kb on - strand, within MPMX26_02248at 2313.555 kb on - strand, within MPMX26_02248at 2313.555 kb on - strand, within MPMX26_02248at 2313.717 kb on - strand, within MPMX26_02248at 2313.735 kb on - strand, within MPMX26_02248at 2313.760 kb on - strand, within MPMX26_02248at 2313.795 kb on - strand, within MPMX26_02248at 2313.795 kb on - strand, within MPMX26_02248at 2313.840 kb on - strand, within MPMX26_02248at 2313.851 kb on - strand, within MPMX26_02248at 2313.858 kb on - strand, within MPMX26_02248at 2313.858 kb on - strand, within MPMX26_02248at 2313.858 kb on - strand, within MPMX26_02248at 2313.884 kb on - strand, within MPMX26_02248at 2313.886 kb on - strand, within MPMX26_02248at 2313.924 kb on - strand, within MPMX26_02248at 2313.926 kb on - strand, within MPMX26_02248at 2313.926 kb on - strand, within MPMX26_02248at 2313.926 kb on - strand, within MPMX26_02248at 2313.926 kb on - strand, within MPMX26_02248at 2313.926 kb on - strand, within MPMX26_02248at 2313.926 kb on - strand, within MPMX26_02248at 2313.931 kb on - strand, within MPMX26_02248at 2313.985 kb on - strand, within MPMX26_02248at 2313.985 kb on - strand, within MPMX26_02248at 2313.985 kb on - strand, within MPMX26_02248at 2313.985 kb on - strand, within MPMX26_02248at 2313.987 kb on - strand, within MPMX26_02248at 2313.987 kb on - strand, within MPMX26_02248at 2313.987 kb on - strand, within MPMX26_02248at 2314.000 kb on - strand, within MPMX26_02248at 2314.000 kb on - strand, within MPMX26_02248at 2314.000 kb on - strand, within MPMX26_02248at 2314.012 kb on - strand, within MPMX26_02248at 2314.012 kb on - strand, within MPMX26_02248at 2314.012 kb on - strand, within MPMX26_02248at 2314.012 kb on - strand, within MPMX26_02248at 2314.012 kb on - strand, within MPMX26_02248at 2314.012 kb on - strand, within MPMX26_02248at 2314.012 kb on - strand, within MPMX26_02248at 2314.012 kb on - strand, within MPMX26_02248at 2314.012 kb on - strand, within MPMX26_02248at 2314.012 kb on - strand, within MPMX26_02248at 2314.012 kb on - strand, within MPMX26_02248at 2314.012 kb on - strand, within MPMX26_02248at 2314.039 kb on - strand, within MPMX26_02248at 2314.041 kb on - strand, within MPMX26_02248at 2314.041 kb on - strand, within MPMX26_02248at 2314.069 kb on - strand, within MPMX26_02248

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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2,311,538 - MPMX26_02246 0.71 +0.4
2,311,607 - MPMX26_02246 0.76 +1.1
2,312,530 - MPMX26_02247 0.39 +1.1
2,312,685 - MPMX26_02247 0.55 +0.7
2,312,740 - MPMX26_02247 0.61 -0.6
2,312,741 - MPMX26_02247 0.61 +2.0
2,312,806 - MPMX26_02247 0.68 -0.2
2,312,866 - MPMX26_02247 0.74 -0.1
2,313,057 - -0.2
2,313,193 - -0.9
2,313,223 - -0.4
2,313,280 - +0.6
2,313,280 - +0.0
2,313,280 - +0.5
2,313,310 - MPMX26_02248 0.11 +0.3
2,313,310 - MPMX26_02248 0.11 -1.5
2,313,310 - MPMX26_02248 0.11 +1.1
2,313,413 + MPMX26_02248 0.19 +1.1
2,313,421 - MPMX26_02248 0.20 -3.7
2,313,421 - MPMX26_02248 0.20 -0.6
2,313,439 - MPMX26_02248 0.21 -0.9
2,313,439 - MPMX26_02248 0.21 -1.0
2,313,457 - MPMX26_02248 0.22 +0.6
2,313,499 - MPMX26_02248 0.26 -0.7
2,313,499 - MPMX26_02248 0.26 -0.9
2,313,499 - MPMX26_02248 0.26 +0.3
2,313,534 - MPMX26_02248 0.28 -0.5
2,313,534 - MPMX26_02248 0.28 -1.6
2,313,534 - MPMX26_02248 0.28 +0.6
2,313,543 - MPMX26_02248 0.29 -2.1
2,313,555 - MPMX26_02248 0.30 -0.4
2,313,555 - MPMX26_02248 0.30 -0.7
2,313,555 - MPMX26_02248 0.30 -0.4
2,313,555 - MPMX26_02248 0.30 -0.5
2,313,555 - MPMX26_02248 0.30 -1.7
2,313,555 - MPMX26_02248 0.30 +0.0
2,313,555 - MPMX26_02248 0.30 -1.3
2,313,717 - MPMX26_02248 0.42 -0.5
2,313,735 - MPMX26_02248 0.43 +1.1
2,313,760 - MPMX26_02248 0.45 -1.4
2,313,795 - MPMX26_02248 0.48 +1.6
2,313,795 - MPMX26_02248 0.48 -0.7
2,313,840 - MPMX26_02248 0.51 -3.2
2,313,851 - MPMX26_02248 0.52 +2.4
2,313,858 - MPMX26_02248 0.52 -0.9
2,313,858 - MPMX26_02248 0.52 -0.6
2,313,858 - MPMX26_02248 0.52 -1.7
2,313,884 - MPMX26_02248 0.54 -0.0
2,313,886 - MPMX26_02248 0.54 -1.5
2,313,924 - MPMX26_02248 0.57 -1.6
2,313,926 - MPMX26_02248 0.57 -0.4
2,313,926 - MPMX26_02248 0.57 +1.4
2,313,926 - MPMX26_02248 0.57 +0.1
2,313,926 - MPMX26_02248 0.57 -0.2
2,313,926 - MPMX26_02248 0.57 +0.4
2,313,926 - MPMX26_02248 0.57 +0.1
2,313,931 - MPMX26_02248 0.58 -0.9
2,313,985 - MPMX26_02248 0.62 -0.4
2,313,985 - MPMX26_02248 0.62 -0.2
2,313,985 - MPMX26_02248 0.62 +1.6
2,313,985 - MPMX26_02248 0.62 +0.9
2,313,987 - MPMX26_02248 0.62 -0.1
2,313,987 - MPMX26_02248 0.62 +0.0
2,313,987 - MPMX26_02248 0.62 -1.0
2,314,000 - MPMX26_02248 0.63 +0.4
2,314,000 - MPMX26_02248 0.63 -3.4
2,314,000 - MPMX26_02248 0.63 -2.4
2,314,012 - MPMX26_02248 0.64 +1.4
2,314,012 - MPMX26_02248 0.64 +0.6
2,314,012 - MPMX26_02248 0.64 -0.6
2,314,012 - MPMX26_02248 0.64 -1.6
2,314,012 - MPMX26_02248 0.64 -0.0
2,314,012 - MPMX26_02248 0.64 -1.1
2,314,012 - MPMX26_02248 0.64 -0.4
2,314,012 - MPMX26_02248 0.64 +0.0
2,314,012 - MPMX26_02248 0.64 -0.2
2,314,012 - MPMX26_02248 0.64 -0.1
2,314,012 - MPMX26_02248 0.64 -1.7
2,314,012 - MPMX26_02248 0.64 -0.3
2,314,039 - MPMX26_02248 0.66 +0.4
2,314,041 - MPMX26_02248 0.66 -0.7
2,314,041 - MPMX26_02248 0.66 -0.9
2,314,069 - MPMX26_02248 0.68 -0.1

Or see this region's nucleotide sequence