Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02189

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02187 and MPMX26_02188 are separated by 13 nucleotidesMPMX26_02188 and MPMX26_02189 are separated by 30 nucleotidesMPMX26_02189 and MPMX26_02190 are separated by 519 nucleotidesMPMX26_02190 and MPMX26_02191 are separated by 22 nucleotides MPMX26_02187: MPMX26_02187 - Baeyer-Villiger monooxygenase, at 2,243,271 to 2,244,815 _02187 MPMX26_02188: MPMX26_02188 - hypothetical protein, at 2,244,829 to 2,245,662 _02188 MPMX26_02189: MPMX26_02189 - hypothetical protein, at 2,245,693 to 2,246,688 _02189 MPMX26_02190: MPMX26_02190 - Acyl-CoA thioesterase YbgC, at 2,247,208 to 2,247,615 _02190 MPMX26_02191: MPMX26_02191 - Tol-Pal system protein TolQ, at 2,247,638 to 2,248,336 _02191 Position (kb) 2245 2246 2247Strain fitness (log2 ratio) -2 -1 0 1 2at 2245.416 kb on + strand, within MPMX26_02188at 2246.524 kb on + strand, within MPMX26_02189at 2247.659 kb on + strandat 2247.659 kb on + strandat 2247.660 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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2,245,416 + MPMX26_02188 0.70 +1.9
2,246,524 + MPMX26_02189 0.83 -1.8
2,247,659 + +0.4
2,247,659 + +0.7
2,247,660 + +0.4

Or see this region's nucleotide sequence