Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01259

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01257 and MPMX26_01258 are separated by 256 nucleotidesMPMX26_01258 and MPMX26_01259 are separated by 6 nucleotidesMPMX26_01259 and MPMX26_01260 are separated by 469 nucleotidesMPMX26_01260 and MPMX26_01261 are separated by 64 nucleotides MPMX26_01257: MPMX26_01257 - Diacetyl reductase [(S)-acetoin forming], at 1,330,887 to 1,331,672 _01257 MPMX26_01258: MPMX26_01258 - hypothetical protein, at 1,331,929 to 1,332,582 _01258 MPMX26_01259: MPMX26_01259 - hypothetical protein, at 1,332,589 to 1,333,056 _01259 MPMX26_01260: MPMX26_01260 - hypothetical protein, at 1,333,526 to 1,333,984 _01260 MPMX26_01261: MPMX26_01261 - hypothetical protein, at 1,334,049 to 1,334,288 _01261 Position (kb) 1332 1333 1334Strain fitness (log2 ratio) -1 0 1 2 3at 1332.069 kb on + strand, within MPMX26_01258at 1332.069 kb on + strand, within MPMX26_01258at 1332.081 kb on + strand, within MPMX26_01258at 1332.081 kb on + strand, within MPMX26_01258at 1332.081 kb on + strand, within MPMX26_01258at 1332.081 kb on + strand, within MPMX26_01258at 1332.081 kb on + strand, within MPMX26_01258at 1332.253 kb on + strand, within MPMX26_01258at 1332.258 kb on + strand, within MPMX26_01258at 1332.258 kb on + strand, within MPMX26_01258at 1332.258 kb on + strand, within MPMX26_01258at 1332.258 kb on + strand, within MPMX26_01258at 1332.258 kb on + strand, within MPMX26_01258at 1332.258 kb on + strand, within MPMX26_01258at 1332.273 kb on + strand, within MPMX26_01258at 1332.415 kb on + strand, within MPMX26_01258at 1332.651 kb on - strand, within MPMX26_01259at 1332.651 kb on - strand, within MPMX26_01259at 1332.789 kb on - strand, within MPMX26_01259at 1332.795 kb on - strand, within MPMX26_01259at 1332.937 kb on - strand, within MPMX26_01259at 1332.939 kb on - strand, within MPMX26_01259at 1332.939 kb on - strand, within MPMX26_01259

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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1,332,069 + MPMX26_01258 0.21 +0.2
1,332,069 + MPMX26_01258 0.21 +0.8
1,332,081 + MPMX26_01258 0.23 -1.2
1,332,081 + MPMX26_01258 0.23 -1.4
1,332,081 + MPMX26_01258 0.23 +1.2
1,332,081 + MPMX26_01258 0.23 -1.2
1,332,081 + MPMX26_01258 0.23 +1.0
1,332,253 + MPMX26_01258 0.50 +0.0
1,332,258 + MPMX26_01258 0.50 +3.1
1,332,258 + MPMX26_01258 0.50 +0.5
1,332,258 + MPMX26_01258 0.50 +0.4
1,332,258 + MPMX26_01258 0.50 -0.7
1,332,258 + MPMX26_01258 0.50 -0.3
1,332,258 + MPMX26_01258 0.50 +0.3
1,332,273 + MPMX26_01258 0.53 -0.0
1,332,415 + MPMX26_01258 0.74 -0.1
1,332,651 - MPMX26_01259 0.13 +1.3
1,332,651 - MPMX26_01259 0.13 +1.9
1,332,789 - MPMX26_01259 0.43 +2.1
1,332,795 - MPMX26_01259 0.44 -0.2
1,332,937 - MPMX26_01259 0.74 +0.0
1,332,939 - MPMX26_01259 0.75 +0.7
1,332,939 - MPMX26_01259 0.75 +1.2

Or see this region's nucleotide sequence