Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01200

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01199 and MPMX26_01200 are separated by 352 nucleotidesMPMX26_01200 and MPMX26_01201 are separated by 709 nucleotides MPMX26_01199: MPMX26_01199 - Inner membrane transport protein YdhP, at 1,272,852 to 1,274,060 _01199 MPMX26_01200: MPMX26_01200 - Sodium/glutamate symporter, at 1,274,413 to 1,275,639 _01200 MPMX26_01201: MPMX26_01201 - HTH-type transcriptional regulator MetR, at 1,276,349 to 1,277,266 _01201 Position (kb) 1274 1275 1276Strain fitness (log2 ratio) -1 0 1at 1273.416 kb on - strand, within MPMX26_01199at 1273.442 kb on - strand, within MPMX26_01199at 1273.452 kb on - strand, within MPMX26_01199at 1273.496 kb on - strand, within MPMX26_01199at 1273.496 kb on - strand, within MPMX26_01199at 1273.565 kb on - strand, within MPMX26_01199at 1273.565 kb on - strand, within MPMX26_01199at 1273.565 kb on - strand, within MPMX26_01199at 1273.583 kb on - strand, within MPMX26_01199at 1273.589 kb on - strand, within MPMX26_01199at 1273.589 kb on - strand, within MPMX26_01199at 1273.641 kb on - strand, within MPMX26_01199at 1273.659 kb on - strand, within MPMX26_01199at 1273.664 kb on - strand, within MPMX26_01199at 1273.669 kb on - strand, within MPMX26_01199at 1273.712 kb on - strand, within MPMX26_01199at 1273.760 kb on - strand, within MPMX26_01199at 1273.860 kb on - strand, within MPMX26_01199at 1273.959 kb on - strandat 1274.063 kb on - strandat 1274.161 kb on + strandat 1276.391 kb on + strandat 1276.421 kb on + strandat 1276.422 kb on + strandat 1276.477 kb on + strand, within MPMX26_01201at 1276.477 kb on + strand, within MPMX26_01201at 1276.487 kb on + strand, within MPMX26_01201at 1276.588 kb on + strand, within MPMX26_01201at 1276.599 kb on + strand, within MPMX26_01201

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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1,273,416 - MPMX26_01199 0.47 -1.1
1,273,442 - MPMX26_01199 0.49 -1.3
1,273,452 - MPMX26_01199 0.50 -0.5
1,273,496 - MPMX26_01199 0.53 -1.3
1,273,496 - MPMX26_01199 0.53 +0.6
1,273,565 - MPMX26_01199 0.59 -1.2
1,273,565 - MPMX26_01199 0.59 -0.2
1,273,565 - MPMX26_01199 0.59 -0.6
1,273,583 - MPMX26_01199 0.60 +0.8
1,273,589 - MPMX26_01199 0.61 -1.2
1,273,589 - MPMX26_01199 0.61 +1.7
1,273,641 - MPMX26_01199 0.65 -1.1
1,273,659 - MPMX26_01199 0.67 -0.1
1,273,664 - MPMX26_01199 0.67 -0.6
1,273,669 - MPMX26_01199 0.68 -0.8
1,273,712 - MPMX26_01199 0.71 +0.5
1,273,760 - MPMX26_01199 0.75 -0.7
1,273,860 - MPMX26_01199 0.83 -0.6
1,273,959 - +0.8
1,274,063 - -0.1
1,274,161 + -0.3
1,276,391 + -0.9
1,276,421 + -0.4
1,276,422 + +0.3
1,276,477 + MPMX26_01201 0.14 +0.6
1,276,477 + MPMX26_01201 0.14 +1.2
1,276,487 + MPMX26_01201 0.15 +0.6
1,276,588 + MPMX26_01201 0.26 -0.7
1,276,599 + MPMX26_01201 0.27 -0.6

Or see this region's nucleotide sequence