Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01182

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01181 and MPMX26_01182 are separated by 46 nucleotidesMPMX26_01182 and MPMX26_01183 are separated by 19 nucleotidesMPMX26_01183 and MPMX26_01184 overlap by 44 nucleotidesMPMX26_01184 and MPMX26_01185 are separated by 60 nucleotides MPMX26_01181: MPMX26_01181 - Molybdopterin-synthase adenylyltransferase, at 1,249,379 to 1,250,161 _01181 MPMX26_01182: MPMX26_01182 - hypothetical protein, at 1,250,208 to 1,251,512 _01182 MPMX26_01183: MPMX26_01183 - Dihydroneopterin aldolase, at 1,251,532 to 1,251,912 _01183 MPMX26_01184: MPMX26_01184 - hypothetical protein, at 1,251,869 to 1,252,312 _01184 MPMX26_01185: MPMX26_01185 - 3-demethoxyubiquinol 3-hydroxylase, at 1,252,373 to 1,253,008 _01185 Position (kb) 1250 1251 1252Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1249.424 kb on + strandat 1249.424 kb on + strandat 1249.474 kb on + strand, within MPMX26_01181at 1249.514 kb on + strand, within MPMX26_01181at 1249.530 kb on + strand, within MPMX26_01181at 1249.556 kb on + strand, within MPMX26_01181at 1249.654 kb on + strand, within MPMX26_01181at 1249.811 kb on + strand, within MPMX26_01181at 1249.819 kb on + strand, within MPMX26_01181at 1249.819 kb on + strand, within MPMX26_01181at 1249.819 kb on + strand, within MPMX26_01181at 1249.843 kb on + strand, within MPMX26_01181at 1249.889 kb on + strand, within MPMX26_01181at 1249.891 kb on + strand, within MPMX26_01181at 1249.928 kb on + strand, within MPMX26_01181at 1249.928 kb on + strand, within MPMX26_01181at 1249.963 kb on + strand, within MPMX26_01181at 1249.970 kb on + strand, within MPMX26_01181at 1249.970 kb on + strand, within MPMX26_01181at 1250.315 kb on + strandat 1250.315 kb on + strandat 1250.369 kb on + strand, within MPMX26_01182at 1250.384 kb on + strand, within MPMX26_01182at 1250.384 kb on + strand, within MPMX26_01182at 1250.453 kb on + strand, within MPMX26_01182at 1250.478 kb on + strand, within MPMX26_01182at 1250.478 kb on + strand, within MPMX26_01182at 1250.478 kb on + strand, within MPMX26_01182at 1250.550 kb on + strand, within MPMX26_01182at 1250.550 kb on + strand, within MPMX26_01182at 1250.550 kb on + strand, within MPMX26_01182at 1250.550 kb on + strand, within MPMX26_01182at 1250.552 kb on + strand, within MPMX26_01182at 1250.576 kb on + strand, within MPMX26_01182at 1250.622 kb on + strand, within MPMX26_01182at 1250.629 kb on + strand, within MPMX26_01182at 1250.667 kb on + strand, within MPMX26_01182at 1250.711 kb on + strand, within MPMX26_01182at 1250.712 kb on + strand, within MPMX26_01182at 1250.729 kb on + strand, within MPMX26_01182at 1250.742 kb on + strand, within MPMX26_01182at 1250.747 kb on + strand, within MPMX26_01182at 1250.747 kb on + strand, within MPMX26_01182at 1250.747 kb on + strand, within MPMX26_01182at 1250.747 kb on + strand, within MPMX26_01182at 1250.834 kb on + strand, within MPMX26_01182at 1250.870 kb on + strand, within MPMX26_01182at 1250.870 kb on + strand, within MPMX26_01182at 1250.886 kb on + strand, within MPMX26_01182at 1250.900 kb on + strand, within MPMX26_01182at 1250.915 kb on + strand, within MPMX26_01182at 1250.964 kb on + strand, within MPMX26_01182at 1250.972 kb on + strand, within MPMX26_01182at 1250.979 kb on + strand, within MPMX26_01182at 1251.011 kb on + strand, within MPMX26_01182at 1251.011 kb on + strand, within MPMX26_01182at 1251.011 kb on + strand, within MPMX26_01182at 1251.011 kb on + strand, within MPMX26_01182at 1251.011 kb on + strand, within MPMX26_01182at 1251.011 kb on + strand, within MPMX26_01182at 1251.011 kb on + strand, within MPMX26_01182at 1251.011 kb on + strand, within MPMX26_01182at 1251.011 kb on + strand, within MPMX26_01182at 1251.042 kb on + strand, within MPMX26_01182at 1251.104 kb on + strand, within MPMX26_01182at 1251.104 kb on + strand, within MPMX26_01182at 1251.116 kb on + strand, within MPMX26_01182at 1251.116 kb on + strand, within MPMX26_01182at 1251.116 kb on + strand, within MPMX26_01182at 1251.116 kb on + strand, within MPMX26_01182at 1251.116 kb on + strand, within MPMX26_01182at 1251.197 kb on + strand, within MPMX26_01182at 1251.197 kb on + strand, within MPMX26_01182at 1251.197 kb on + strand, within MPMX26_01182at 1251.197 kb on + strand, within MPMX26_01182at 1251.227 kb on + strand, within MPMX26_01182at 1251.266 kb on + strand, within MPMX26_01182at 1251.340 kb on + strand, within MPMX26_01182at 1251.401 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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1,249,424 + +0.3
1,249,424 + -1.5
1,249,474 + MPMX26_01181 0.12 +0.5
1,249,514 + MPMX26_01181 0.17 +2.3
1,249,530 + MPMX26_01181 0.19 +3.5
1,249,556 + MPMX26_01181 0.23 +2.5
1,249,654 + MPMX26_01181 0.35 -1.0
1,249,811 + MPMX26_01181 0.55 +0.8
1,249,819 + MPMX26_01181 0.56 +0.6
1,249,819 + MPMX26_01181 0.56 +1.8
1,249,819 + MPMX26_01181 0.56 +0.4
1,249,843 + MPMX26_01181 0.59 +0.3
1,249,889 + MPMX26_01181 0.65 -1.0
1,249,891 + MPMX26_01181 0.65 -1.3
1,249,928 + MPMX26_01181 0.70 +0.3
1,249,928 + MPMX26_01181 0.70 +1.2
1,249,963 + MPMX26_01181 0.75 -0.4
1,249,970 + MPMX26_01181 0.75 +1.1
1,249,970 + MPMX26_01181 0.75 +1.8
1,250,315 + +0.6
1,250,315 + +0.5
1,250,369 + MPMX26_01182 0.12 +0.4
1,250,384 + MPMX26_01182 0.13 +0.8
1,250,384 + MPMX26_01182 0.13 +0.4
1,250,453 + MPMX26_01182 0.19 -0.0
1,250,478 + MPMX26_01182 0.21 +1.4
1,250,478 + MPMX26_01182 0.21 +0.7
1,250,478 + MPMX26_01182 0.21 -0.3
1,250,550 + MPMX26_01182 0.26 +1.6
1,250,550 + MPMX26_01182 0.26 +0.7
1,250,550 + MPMX26_01182 0.26 +0.7
1,250,550 + MPMX26_01182 0.26 +0.4
1,250,552 + MPMX26_01182 0.26 +0.9
1,250,576 + MPMX26_01182 0.28 +0.9
1,250,622 + MPMX26_01182 0.32 +1.2
1,250,629 + MPMX26_01182 0.32 +2.6
1,250,667 + MPMX26_01182 0.35 +0.3
1,250,711 + MPMX26_01182 0.39 +0.7
1,250,712 + MPMX26_01182 0.39 +0.9
1,250,729 + MPMX26_01182 0.40 -0.4
1,250,742 + MPMX26_01182 0.41 -0.2
1,250,747 + MPMX26_01182 0.41 +1.0
1,250,747 + MPMX26_01182 0.41 +0.9
1,250,747 + MPMX26_01182 0.41 +0.8
1,250,747 + MPMX26_01182 0.41 +0.4
1,250,834 + MPMX26_01182 0.48 +0.7
1,250,870 + MPMX26_01182 0.51 +0.6
1,250,870 + MPMX26_01182 0.51 +1.0
1,250,886 + MPMX26_01182 0.52 +0.6
1,250,900 + MPMX26_01182 0.53 +0.5
1,250,915 + MPMX26_01182 0.54 -0.2
1,250,964 + MPMX26_01182 0.58 +0.7
1,250,972 + MPMX26_01182 0.59 +0.9
1,250,979 + MPMX26_01182 0.59 +0.7
1,251,011 + MPMX26_01182 0.62 +0.4
1,251,011 + MPMX26_01182 0.62 +0.7
1,251,011 + MPMX26_01182 0.62 +0.4
1,251,011 + MPMX26_01182 0.62 +0.5
1,251,011 + MPMX26_01182 0.62 +0.4
1,251,011 + MPMX26_01182 0.62 -0.3
1,251,011 + MPMX26_01182 0.62 +0.9
1,251,011 + MPMX26_01182 0.62 +0.5
1,251,011 + MPMX26_01182 0.62 +0.4
1,251,042 + MPMX26_01182 0.64 +0.1
1,251,104 + MPMX26_01182 0.69 +0.4
1,251,104 + MPMX26_01182 0.69 -1.8
1,251,116 + MPMX26_01182 0.70 +0.9
1,251,116 + MPMX26_01182 0.70 -1.1
1,251,116 + MPMX26_01182 0.70 +0.7
1,251,116 + MPMX26_01182 0.70 +0.4
1,251,116 + MPMX26_01182 0.70 +0.5
1,251,197 + MPMX26_01182 0.76 +0.6
1,251,197 + MPMX26_01182 0.76 +0.2
1,251,197 + MPMX26_01182 0.76 +0.8
1,251,197 + MPMX26_01182 0.76 +0.4
1,251,227 + MPMX26_01182 0.78 +0.3
1,251,266 + MPMX26_01182 0.81 -1.3
1,251,340 + MPMX26_01182 0.87 +3.1
1,251,401 + +0.1

Or see this region's nucleotide sequence