Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01083

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01081 and MPMX26_01082 are separated by 103 nucleotidesMPMX26_01082 and MPMX26_01083 are separated by 61 nucleotidesMPMX26_01083 and MPMX26_01084 are separated by 81 nucleotidesMPMX26_01084 and MPMX26_01085 are separated by 254 nucleotides MPMX26_01081: MPMX26_01081 - Glucosyl-3-phosphoglycerate synthase, at 1,149,355 to 1,150,566 _01081 MPMX26_01082: MPMX26_01082 - hypothetical protein, at 1,150,670 to 1,151,050 _01082 MPMX26_01083: MPMX26_01083 - Ribonuclease HII, at 1,151,112 to 1,151,687 _01083 MPMX26_01084: MPMX26_01084 - Translational regulator CsrA, at 1,151,769 to 1,152,023 _01084 MPMX26_01085: MPMX26_01085 - Aspartate kinase, at 1,152,278 to 1,153,558 _01085 Position (kb) 1151 1152Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 1150.748 kb on + strand, within MPMX26_01082at 1150.813 kb on + strand, within MPMX26_01082at 1150.813 kb on + strand, within MPMX26_01082at 1150.813 kb on + strand, within MPMX26_01082at 1150.813 kb on + strand, within MPMX26_01082at 1150.813 kb on + strand, within MPMX26_01082at 1150.823 kb on + strand, within MPMX26_01082at 1150.864 kb on + strand, within MPMX26_01082at 1150.928 kb on + strand, within MPMX26_01082at 1150.954 kb on + strand, within MPMX26_01082at 1150.954 kb on + strand, within MPMX26_01082at 1150.954 kb on + strand, within MPMX26_01082at 1150.954 kb on + strand, within MPMX26_01082at 1150.970 kb on + strand, within MPMX26_01082at 1150.981 kb on + strand, within MPMX26_01082at 1151.008 kb on + strand, within MPMX26_01082at 1151.124 kb on + strandat 1151.135 kb on + strandat 1151.172 kb on + strand, within MPMX26_01083at 1151.201 kb on + strand, within MPMX26_01083at 1151.209 kb on + strand, within MPMX26_01083at 1151.277 kb on + strand, within MPMX26_01083at 1151.288 kb on + strand, within MPMX26_01083at 1151.367 kb on + strand, within MPMX26_01083at 1151.367 kb on + strand, within MPMX26_01083at 1151.367 kb on + strand, within MPMX26_01083at 1151.367 kb on + strand, within MPMX26_01083at 1151.367 kb on + strand, within MPMX26_01083at 1151.367 kb on + strand, within MPMX26_01083at 1151.402 kb on + strand, within MPMX26_01083at 1151.430 kb on + strand, within MPMX26_01083at 1151.433 kb on + strand, within MPMX26_01083at 1151.435 kb on + strand, within MPMX26_01083at 1151.435 kb on + strand, within MPMX26_01083at 1151.448 kb on + strand, within MPMX26_01083at 1151.453 kb on + strand, within MPMX26_01083at 1151.454 kb on + strand, within MPMX26_01083at 1151.466 kb on + strand, within MPMX26_01083at 1151.466 kb on + strand, within MPMX26_01083at 1151.466 kb on + strand, within MPMX26_01083at 1151.466 kb on + strand, within MPMX26_01083at 1151.501 kb on + strand, within MPMX26_01083at 1151.501 kb on + strand, within MPMX26_01083at 1151.501 kb on + strand, within MPMX26_01083at 1151.537 kb on + strand, within MPMX26_01083at 1151.543 kb on + strand, within MPMX26_01083at 1151.553 kb on + strand, within MPMX26_01083at 1151.561 kb on - strand, within MPMX26_01083at 1151.570 kb on + strand, within MPMX26_01083at 1151.570 kb on + strand, within MPMX26_01083at 1151.570 kb on + strand, within MPMX26_01083at 1151.570 kb on + strand, within MPMX26_01083at 1151.571 kb on + strand, within MPMX26_01083at 1151.571 kb on + strand, within MPMX26_01083at 1151.579 kb on - strand, within MPMX26_01083at 1151.579 kb on - strand, within MPMX26_01083at 1151.610 kb on + strand, within MPMX26_01083at 1151.610 kb on + strand, within MPMX26_01083at 1151.610 kb on + strand, within MPMX26_01083at 1151.610 kb on + strand, within MPMX26_01083at 1151.620 kb on + strand, within MPMX26_01083at 1151.639 kb on + strandat 1151.644 kb on + strandat 1151.663 kb on + strandat 1151.663 kb on + strandat 1151.663 kb on + strandat 1151.758 kb on - strandat 1151.804 kb on - strand, within MPMX26_01084at 1151.831 kb on - strand, within MPMX26_01084at 1151.845 kb on - strand, within MPMX26_01084at 1151.868 kb on - strand, within MPMX26_01084at 1151.932 kb on - strand, within MPMX26_01084at 1151.946 kb on - strand, within MPMX26_01084at 1151.958 kb on - strand, within MPMX26_01084at 1151.958 kb on - strand, within MPMX26_01084at 1151.963 kb on - strand, within MPMX26_01084at 1151.963 kb on - strand, within MPMX26_01084at 1151.968 kb on - strand, within MPMX26_01084at 1151.968 kb on - strand, within MPMX26_01084at 1151.968 kb on - strand, within MPMX26_01084at 1152.017 kb on - strandat 1152.256 kb on - strandat 1152.256 kb on - strandat 1152.262 kb on - strandat 1152.312 kb on - strandat 1152.319 kb on - strandat 1152.323 kb on - strandat 1152.329 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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1,150,748 + MPMX26_01082 0.20 +0.2
1,150,813 + MPMX26_01082 0.38 -0.7
1,150,813 + MPMX26_01082 0.38 -0.4
1,150,813 + MPMX26_01082 0.38 -0.9
1,150,813 + MPMX26_01082 0.38 -0.1
1,150,813 + MPMX26_01082 0.38 +0.2
1,150,823 + MPMX26_01082 0.40 -1.1
1,150,864 + MPMX26_01082 0.51 -2.1
1,150,928 + MPMX26_01082 0.68 +0.5
1,150,954 + MPMX26_01082 0.75 -0.8
1,150,954 + MPMX26_01082 0.75 -0.2
1,150,954 + MPMX26_01082 0.75 -0.2
1,150,954 + MPMX26_01082 0.75 -0.0
1,150,970 + MPMX26_01082 0.79 -1.1
1,150,981 + MPMX26_01082 0.82 -0.4
1,151,008 + MPMX26_01082 0.89 +0.1
1,151,124 + +0.1
1,151,135 + +2.5
1,151,172 + MPMX26_01083 0.10 +0.7
1,151,201 + MPMX26_01083 0.15 +0.3
1,151,209 + MPMX26_01083 0.17 -1.9
1,151,277 + MPMX26_01083 0.29 -0.3
1,151,288 + MPMX26_01083 0.31 +0.7
1,151,367 + MPMX26_01083 0.44 +0.2
1,151,367 + MPMX26_01083 0.44 +0.4
1,151,367 + MPMX26_01083 0.44 +0.7
1,151,367 + MPMX26_01083 0.44 +0.1
1,151,367 + MPMX26_01083 0.44 -0.1
1,151,367 + MPMX26_01083 0.44 +0.6
1,151,402 + MPMX26_01083 0.50 +0.1
1,151,430 + MPMX26_01083 0.55 -0.1
1,151,433 + MPMX26_01083 0.56 +0.0
1,151,435 + MPMX26_01083 0.56 +2.5
1,151,435 + MPMX26_01083 0.56 -0.1
1,151,448 + MPMX26_01083 0.58 -0.9
1,151,453 + MPMX26_01083 0.59 -0.6
1,151,454 + MPMX26_01083 0.59 +0.8
1,151,466 + MPMX26_01083 0.61 -0.7
1,151,466 + MPMX26_01083 0.61 +0.3
1,151,466 + MPMX26_01083 0.61 -0.6
1,151,466 + MPMX26_01083 0.61 +0.5
1,151,501 + MPMX26_01083 0.68 -0.2
1,151,501 + MPMX26_01083 0.68 -0.6
1,151,501 + MPMX26_01083 0.68 -0.6
1,151,537 + MPMX26_01083 0.74 +0.6
1,151,543 + MPMX26_01083 0.75 +0.2
1,151,553 + MPMX26_01083 0.77 -1.2
1,151,561 - MPMX26_01083 0.78 +2.5
1,151,570 + MPMX26_01083 0.80 +0.3
1,151,570 + MPMX26_01083 0.80 -0.6
1,151,570 + MPMX26_01083 0.80 -0.6
1,151,570 + MPMX26_01083 0.80 +0.3
1,151,571 + MPMX26_01083 0.80 +0.4
1,151,571 + MPMX26_01083 0.80 +0.4
1,151,579 - MPMX26_01083 0.81 +0.4
1,151,579 - MPMX26_01083 0.81 +0.1
1,151,610 + MPMX26_01083 0.86 +0.2
1,151,610 + MPMX26_01083 0.86 +0.5
1,151,610 + MPMX26_01083 0.86 -0.7
1,151,610 + MPMX26_01083 0.86 -0.1
1,151,620 + MPMX26_01083 0.88 +0.9
1,151,639 + -0.6
1,151,644 + -0.8
1,151,663 + +0.2
1,151,663 + -0.4
1,151,663 + +0.5
1,151,758 - -0.7
1,151,804 - MPMX26_01084 0.14 +3.5
1,151,831 - MPMX26_01084 0.24 +3.5
1,151,845 - MPMX26_01084 0.30 +2.8
1,151,868 - MPMX26_01084 0.39 +3.4
1,151,932 - MPMX26_01084 0.64 +4.0
1,151,946 - MPMX26_01084 0.69 +3.9
1,151,958 - MPMX26_01084 0.74 +3.9
1,151,958 - MPMX26_01084 0.74 +3.9
1,151,963 - MPMX26_01084 0.76 +3.9
1,151,963 - MPMX26_01084 0.76 +3.8
1,151,968 - MPMX26_01084 0.78 +3.9
1,151,968 - MPMX26_01084 0.78 +4.1
1,151,968 - MPMX26_01084 0.78 +3.5
1,152,017 - +3.9
1,152,256 - -0.3
1,152,256 - +0.3
1,152,262 - -0.2
1,152,312 - -2.4
1,152,319 - -4.2
1,152,323 - -3.4
1,152,329 - -3.2

Or see this region's nucleotide sequence