Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01013

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01012 and MPMX26_01013 are separated by 53 nucleotidesMPMX26_01013 and MPMX26_01014 are separated by 81 nucleotides MPMX26_01012: MPMX26_01012 - Isocitrate dehydrogenase [NADP], at 1,068,180 to 1,069,436 _01012 MPMX26_01013: MPMX26_01013 - hypothetical protein, at 1,069,490 to 1,070,083 _01013 MPMX26_01014: MPMX26_01014 - putative isomerase YddE, at 1,070,165 to 1,070,992 _01014 Position (kb) 1069 1070 1071Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1068.540 kb on + strand, within MPMX26_01012at 1068.549 kb on + strand, within MPMX26_01012at 1068.549 kb on + strand, within MPMX26_01012at 1068.549 kb on + strand, within MPMX26_01012at 1068.559 kb on + strand, within MPMX26_01012at 1068.559 kb on + strand, within MPMX26_01012at 1068.570 kb on + strand, within MPMX26_01012at 1068.578 kb on + strand, within MPMX26_01012at 1068.585 kb on + strand, within MPMX26_01012at 1068.590 kb on + strand, within MPMX26_01012at 1068.590 kb on + strand, within MPMX26_01012at 1068.590 kb on + strand, within MPMX26_01012at 1068.590 kb on + strand, within MPMX26_01012at 1068.590 kb on + strand, within MPMX26_01012at 1068.590 kb on + strand, within MPMX26_01012at 1068.590 kb on + strand, within MPMX26_01012at 1068.590 kb on + strand, within MPMX26_01012at 1068.590 kb on + strand, within MPMX26_01012at 1068.590 kb on + strand, within MPMX26_01012at 1068.590 kb on + strand, within MPMX26_01012at 1068.621 kb on + strand, within MPMX26_01012at 1068.621 kb on + strand, within MPMX26_01012at 1068.792 kb on + strand, within MPMX26_01012at 1068.809 kb on + strand, within MPMX26_01012at 1068.809 kb on + strand, within MPMX26_01012at 1068.809 kb on + strand, within MPMX26_01012at 1068.863 kb on + strand, within MPMX26_01012at 1068.869 kb on + strand, within MPMX26_01012at 1068.869 kb on + strand, within MPMX26_01012at 1068.887 kb on + strand, within MPMX26_01012at 1068.950 kb on + strand, within MPMX26_01012at 1068.953 kb on + strand, within MPMX26_01012at 1068.993 kb on + strand, within MPMX26_01012at 1069.043 kb on + strand, within MPMX26_01012at 1069.151 kb on + strand, within MPMX26_01012at 1069.186 kb on + strand, within MPMX26_01012at 1069.191 kb on + strand, within MPMX26_01012at 1069.203 kb on + strand, within MPMX26_01012at 1069.218 kb on + strand, within MPMX26_01012at 1069.223 kb on + strand, within MPMX26_01012at 1069.223 kb on + strand, within MPMX26_01012at 1069.223 kb on + strand, within MPMX26_01012at 1069.223 kb on + strand, within MPMX26_01012at 1069.223 kb on + strand, within MPMX26_01012at 1069.223 kb on + strand, within MPMX26_01012at 1069.223 kb on + strand, within MPMX26_01012at 1069.223 kb on + strand, within MPMX26_01012at 1069.223 kb on + strand, within MPMX26_01012at 1069.223 kb on + strand, within MPMX26_01012at 1069.223 kb on + strand, within MPMX26_01012at 1069.239 kb on + strand, within MPMX26_01012at 1069.257 kb on + strand, within MPMX26_01012at 1069.275 kb on + strand, within MPMX26_01012at 1069.285 kb on + strand, within MPMX26_01012at 1069.285 kb on + strand, within MPMX26_01012at 1069.285 kb on + strand, within MPMX26_01012at 1069.285 kb on + strand, within MPMX26_01012at 1069.334 kb on + strandat 1069.334 kb on + strandat 1069.383 kb on + strandat 1069.383 kb on + strandat 1069.383 kb on + strandat 1069.383 kb on + strandat 1069.383 kb on + strandat 1069.393 kb on + strandat 1069.393 kb on + strandat 1069.393 kb on + strandat 1069.393 kb on + strandat 1069.393 kb on + strandat 1069.393 kb on + strandat 1069.393 kb on + strandat 1069.732 kb on - strand, within MPMX26_01013at 1069.732 kb on - strand, within MPMX26_01013at 1069.732 kb on - strand, within MPMX26_01013at 1069.954 kb on - strand, within MPMX26_01013at 1069.981 kb on - strand, within MPMX26_01013at 1070.384 kb on + strand, within MPMX26_01014at 1070.692 kb on + strand, within MPMX26_01014at 1070.692 kb on + strand, within MPMX26_01014at 1070.782 kb on + strand, within MPMX26_01014at 1070.795 kb on + strand, within MPMX26_01014at 1070.839 kb on + strand, within MPMX26_01014at 1070.903 kb on + strand, within MPMX26_01014at 1070.903 kb on + strand, within MPMX26_01014at 1070.959 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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1,068,540 + MPMX26_01012 0.29 -0.2
1,068,549 + MPMX26_01012 0.29 -0.6
1,068,549 + MPMX26_01012 0.29 -1.7
1,068,549 + MPMX26_01012 0.29 -0.8
1,068,559 + MPMX26_01012 0.30 +0.5
1,068,559 + MPMX26_01012 0.30 +0.1
1,068,570 + MPMX26_01012 0.31 -0.6
1,068,578 + MPMX26_01012 0.32 -0.5
1,068,585 + MPMX26_01012 0.32 -0.2
1,068,590 + MPMX26_01012 0.33 +1.0
1,068,590 + MPMX26_01012 0.33 -1.2
1,068,590 + MPMX26_01012 0.33 +0.8
1,068,590 + MPMX26_01012 0.33 -0.2
1,068,590 + MPMX26_01012 0.33 -0.7
1,068,590 + MPMX26_01012 0.33 -1.0
1,068,590 + MPMX26_01012 0.33 -0.5
1,068,590 + MPMX26_01012 0.33 +0.1
1,068,590 + MPMX26_01012 0.33 -0.3
1,068,590 + MPMX26_01012 0.33 -0.5
1,068,590 + MPMX26_01012 0.33 -0.6
1,068,621 + MPMX26_01012 0.35 -0.9
1,068,621 + MPMX26_01012 0.35 +0.5
1,068,792 + MPMX26_01012 0.49 +0.0
1,068,809 + MPMX26_01012 0.50 +0.1
1,068,809 + MPMX26_01012 0.50 +0.0
1,068,809 + MPMX26_01012 0.50 -0.5
1,068,863 + MPMX26_01012 0.54 -1.1
1,068,869 + MPMX26_01012 0.55 -0.9
1,068,869 + MPMX26_01012 0.55 -0.6
1,068,887 + MPMX26_01012 0.56 +0.9
1,068,950 + MPMX26_01012 0.61 +0.0
1,068,953 + MPMX26_01012 0.61 -0.3
1,068,993 + MPMX26_01012 0.65 -1.0
1,069,043 + MPMX26_01012 0.69 -0.7
1,069,151 + MPMX26_01012 0.77 +0.6
1,069,186 + MPMX26_01012 0.80 +0.1
1,069,191 + MPMX26_01012 0.80 +0.5
1,069,203 + MPMX26_01012 0.81 -0.6
1,069,218 + MPMX26_01012 0.83 -0.3
1,069,223 + MPMX26_01012 0.83 -0.3
1,069,223 + MPMX26_01012 0.83 +0.3
1,069,223 + MPMX26_01012 0.83 +0.5
1,069,223 + MPMX26_01012 0.83 -0.2
1,069,223 + MPMX26_01012 0.83 -0.6
1,069,223 + MPMX26_01012 0.83 -1.2
1,069,223 + MPMX26_01012 0.83 -0.2
1,069,223 + MPMX26_01012 0.83 -0.7
1,069,223 + MPMX26_01012 0.83 -1.4
1,069,223 + MPMX26_01012 0.83 -0.9
1,069,223 + MPMX26_01012 0.83 -1.1
1,069,239 + MPMX26_01012 0.84 -0.3
1,069,257 + MPMX26_01012 0.86 -0.1
1,069,275 + MPMX26_01012 0.87 -0.2
1,069,285 + MPMX26_01012 0.88 -0.6
1,069,285 + MPMX26_01012 0.88 +0.4
1,069,285 + MPMX26_01012 0.88 -2.1
1,069,285 + MPMX26_01012 0.88 -0.4
1,069,334 + -0.9
1,069,334 + +0.5
1,069,383 + -0.2
1,069,383 + -0.2
1,069,383 + -0.9
1,069,383 + +0.3
1,069,383 + -1.6
1,069,393 + -0.3
1,069,393 + +0.2
1,069,393 + -0.4
1,069,393 + -0.6
1,069,393 + +0.9
1,069,393 + +0.5
1,069,393 + +0.7
1,069,732 - MPMX26_01013 0.41 +0.5
1,069,732 - MPMX26_01013 0.41 +2.0
1,069,732 - MPMX26_01013 0.41 -0.4
1,069,954 - MPMX26_01013 0.78 +0.2
1,069,981 - MPMX26_01013 0.83 -1.4
1,070,384 + MPMX26_01014 0.26 +0.1
1,070,692 + MPMX26_01014 0.64 +1.3
1,070,692 + MPMX26_01014 0.64 +0.7
1,070,782 + MPMX26_01014 0.75 -0.1
1,070,795 + MPMX26_01014 0.76 -0.2
1,070,839 + MPMX26_01014 0.81 +3.0
1,070,903 + MPMX26_01014 0.89 +0.3
1,070,903 + MPMX26_01014 0.89 -0.4
1,070,959 + -0.3

Or see this region's nucleotide sequence