Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00953 and MPMX26_00954 are separated by 213 nucleotides MPMX26_00954 and MPMX26_00955 are separated by 124 nucleotides MPMX26_00955 and MPMX26_00956 are separated by 62 nucleotides MPMX26_00956 and MPMX26_00957 are separated by 9 nucleotides
MPMX26_00953: MPMX26_00953 - FMN reductase (NADH) RutF, at 1,002,286 to 1,002,789
_00953
MPMX26_00954: MPMX26_00954 - 4-hydroxybenzaldehyde dehydrogenase (NADP(+)), at 1,003,003 to 1,003,371
_00954
MPMX26_00955: MPMX26_00955 - hypothetical protein, at 1,003,496 to 1,004,398
_00955
MPMX26_00956: MPMX26_00956 - hypothetical protein, at 1,004,461 to 1,005,090
_00956
MPMX26_00957: MPMX26_00957 - hypothetical protein, at 1,005,100 to 1,005,909
_00957
Position (kb) 1003
1004
1005 Strain fitness (log2 ratio) -1
0
1
2 at 1003.670 kb on + strand, within MPMX26_00955 at 1004.386 kb on + strand at 1004.405 kb on + strand at 1005.168 kb on - strand at 1005.200 kb on - strand, within MPMX26_00957 at 1005.279 kb on - strand, within MPMX26_00957 at 1005.372 kb on - strand, within MPMX26_00957
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,003,670 + MPMX26_00955 0.19 +0.5 1,004,386 + +0.9 1,004,405 + +1.3 1,005,168 - +2.0 1,005,200 - MPMX26_00957 0.12 -0.4 1,005,279 - MPMX26_00957 0.22 +0.6 1,005,372 - MPMX26_00957 0.34 -0.8
Or see this region's nucleotide sequence