Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00890

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00889 and MPMX26_00890 are separated by 16 nucleotidesMPMX26_00890 and MPMX26_00891 are separated by 416 nucleotides MPMX26_00889: MPMX26_00889 - NADPH-dependent curcumin reductase, at 934,728 to 935,747 _00889 MPMX26_00890: MPMX26_00890 - hypothetical protein, at 935,764 to 936,402 _00890 MPMX26_00891: MPMX26_00891 - hypothetical protein, at 936,819 to 937,250 _00891 Position (kb) 935 936 937Strain fitness (log2 ratio) -1 0 1 2at 935.130 kb on + strand, within MPMX26_00889at 935.144 kb on + strand, within MPMX26_00889at 935.451 kb on + strand, within MPMX26_00889at 936.228 kb on + strand, within MPMX26_00890at 936.331 kb on + strand, within MPMX26_00890at 936.796 kb on - strandat 936.835 kb on - strandat 936.835 kb on - strandat 936.844 kb on - strandat 936.851 kb on - strandat 936.851 kb on - strandat 936.913 kb on - strand, within MPMX26_00891at 936.913 kb on - strand, within MPMX26_00891at 937.104 kb on - strand, within MPMX26_00891at 937.191 kb on - strand, within MPMX26_00891at 937.191 kb on - strand, within MPMX26_00891at 937.191 kb on - strand, within MPMX26_00891at 937.192 kb on - strand, within MPMX26_00891at 937.193 kb on - strand, within MPMX26_00891at 937.193 kb on - strand, within MPMX26_00891

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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935,130 + MPMX26_00889 0.39 +2.4
935,144 + MPMX26_00889 0.41 +2.0
935,451 + MPMX26_00889 0.71 +1.4
936,228 + MPMX26_00890 0.73 +0.3
936,331 + MPMX26_00890 0.89 +2.0
936,796 - +2.0
936,835 - -0.4
936,835 - -0.3
936,844 - -0.5
936,851 - +0.3
936,851 - -0.2
936,913 - MPMX26_00891 0.22 +0.1
936,913 - MPMX26_00891 0.22 +0.1
937,104 - MPMX26_00891 0.66 +0.0
937,191 - MPMX26_00891 0.86 +0.8
937,191 - MPMX26_00891 0.86 -0.2
937,191 - MPMX26_00891 0.86 -0.5
937,192 - MPMX26_00891 0.86 +0.0
937,193 - MPMX26_00891 0.87 +0.4
937,193 - MPMX26_00891 0.87 +0.0

Or see this region's nucleotide sequence