Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00364

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00363 and MPMX26_00364 are separated by 294 nucleotidesMPMX26_00364 and MPMX26_00365 are separated by 34 nucleotides MPMX26_00363: MPMX26_00363 - hypothetical protein, at 393,708 to 394,733 _00363 MPMX26_00364: MPMX26_00364 - hypothetical protein, at 395,028 to 395,477 _00364 MPMX26_00365: MPMX26_00365 - DNA topoisomerase 1, at 395,512 to 398,154 _00365 Position (kb) 395 396Strain fitness (log2 ratio) -1 0 1 2 3at 394.047 kb on - strand, within MPMX26_00363at 394.071 kb on + strand, within MPMX26_00363at 394.071 kb on + strand, within MPMX26_00363at 394.079 kb on + strand, within MPMX26_00363at 394.101 kb on + strand, within MPMX26_00363at 394.101 kb on + strand, within MPMX26_00363at 394.124 kb on + strand, within MPMX26_00363at 394.194 kb on + strand, within MPMX26_00363at 394.194 kb on + strand, within MPMX26_00363at 394.194 kb on + strand, within MPMX26_00363at 394.197 kb on + strand, within MPMX26_00363at 394.197 kb on + strand, within MPMX26_00363at 394.204 kb on + strand, within MPMX26_00363at 394.249 kb on + strand, within MPMX26_00363at 394.348 kb on + strand, within MPMX26_00363at 394.362 kb on + strand, within MPMX26_00363at 394.362 kb on + strand, within MPMX26_00363at 394.364 kb on + strand, within MPMX26_00363at 394.372 kb on + strand, within MPMX26_00363at 394.391 kb on + strand, within MPMX26_00363at 394.391 kb on + strand, within MPMX26_00363at 394.391 kb on + strand, within MPMX26_00363at 394.391 kb on + strand, within MPMX26_00363at 394.391 kb on + strand, within MPMX26_00363at 394.466 kb on + strand, within MPMX26_00363at 394.485 kb on + strand, within MPMX26_00363at 394.525 kb on + strand, within MPMX26_00363at 394.592 kb on + strand, within MPMX26_00363at 394.593 kb on + strand, within MPMX26_00363at 394.600 kb on - strand, within MPMX26_00363at 394.600 kb on - strand, within MPMX26_00363at 394.711 kb on - strandat 394.779 kb on + strandat 394.855 kb on - strandat 394.936 kb on + strandat 394.936 kb on + strandat 394.936 kb on + strandat 394.936 kb on + strandat 394.936 kb on + strandat 394.936 kb on + strandat 394.988 kb on + strandat 394.990 kb on - strandat 394.993 kb on + strandat 394.993 kb on + strandat 395.085 kb on + strand, within MPMX26_00364at 395.092 kb on + strand, within MPMX26_00364at 395.092 kb on + strand, within MPMX26_00364at 395.098 kb on + strand, within MPMX26_00364at 395.098 kb on + strand, within MPMX26_00364at 395.098 kb on + strand, within MPMX26_00364at 395.149 kb on + strand, within MPMX26_00364at 395.150 kb on + strand, within MPMX26_00364at 395.161 kb on + strand, within MPMX26_00364at 395.161 kb on + strand, within MPMX26_00364at 395.319 kb on + strand, within MPMX26_00364at 395.319 kb on + strand, within MPMX26_00364at 395.319 kb on + strand, within MPMX26_00364at 395.319 kb on + strand, within MPMX26_00364at 395.367 kb on + strand, within MPMX26_00364at 395.386 kb on + strand, within MPMX26_00364at 395.415 kb on + strand, within MPMX26_00364at 395.415 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.436 kb on + strandat 395.441 kb on + strandat 395.448 kb on + strandat 395.469 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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394,047 - MPMX26_00363 0.33 +0.7
394,071 + MPMX26_00363 0.35 +0.8
394,071 + MPMX26_00363 0.35 -0.6
394,079 + MPMX26_00363 0.36 -0.5
394,101 + MPMX26_00363 0.38 -0.1
394,101 + MPMX26_00363 0.38 -0.4
394,124 + MPMX26_00363 0.41 -0.4
394,194 + MPMX26_00363 0.47 -0.1
394,194 + MPMX26_00363 0.47 +0.0
394,194 + MPMX26_00363 0.47 +0.1
394,197 + MPMX26_00363 0.48 -0.0
394,197 + MPMX26_00363 0.48 -0.7
394,204 + MPMX26_00363 0.48 +0.2
394,249 + MPMX26_00363 0.53 -0.8
394,348 + MPMX26_00363 0.62 +1.0
394,362 + MPMX26_00363 0.64 -1.1
394,362 + MPMX26_00363 0.64 -0.4
394,364 + MPMX26_00363 0.64 -0.0
394,372 + MPMX26_00363 0.65 +0.3
394,391 + MPMX26_00363 0.67 -0.7
394,391 + MPMX26_00363 0.67 -0.0
394,391 + MPMX26_00363 0.67 +0.6
394,391 + MPMX26_00363 0.67 +0.1
394,391 + MPMX26_00363 0.67 +0.3
394,466 + MPMX26_00363 0.74 -1.2
394,485 + MPMX26_00363 0.76 -1.2
394,525 + MPMX26_00363 0.80 -0.6
394,592 + MPMX26_00363 0.86 -1.3
394,593 + MPMX26_00363 0.86 -0.3
394,600 - MPMX26_00363 0.87 +2.0
394,600 - MPMX26_00363 0.87 +0.9
394,711 - -0.8
394,779 + -0.8
394,855 - -0.1
394,936 + +1.2
394,936 + -0.5
394,936 + +0.7
394,936 + +0.9
394,936 + -0.5
394,936 + +1.0
394,988 + +1.7
394,990 - +2.0
394,993 + +1.2
394,993 + +0.9
395,085 + MPMX26_00364 0.13 +1.2
395,092 + MPMX26_00364 0.14 +0.3
395,092 + MPMX26_00364 0.14 +0.9
395,098 + MPMX26_00364 0.16 +0.7
395,098 + MPMX26_00364 0.16 +3.3
395,098 + MPMX26_00364 0.16 +0.8
395,149 + MPMX26_00364 0.27 +1.3
395,150 + MPMX26_00364 0.27 -0.0
395,161 + MPMX26_00364 0.30 +1.5
395,161 + MPMX26_00364 0.30 +1.2
395,319 + MPMX26_00364 0.65 +1.3
395,319 + MPMX26_00364 0.65 +0.7
395,319 + MPMX26_00364 0.65 +1.2
395,319 + MPMX26_00364 0.65 +0.5
395,367 + MPMX26_00364 0.75 +0.8
395,386 + MPMX26_00364 0.80 +1.1
395,415 + MPMX26_00364 0.86 +0.7
395,415 + MPMX26_00364 0.86 +2.0
395,422 + MPMX26_00364 0.88 +1.4
395,422 + MPMX26_00364 0.88 +1.9
395,422 + MPMX26_00364 0.88 +1.6
395,422 + MPMX26_00364 0.88 +2.2
395,422 + MPMX26_00364 0.88 +1.5
395,422 + MPMX26_00364 0.88 +3.4
395,422 + MPMX26_00364 0.88 +2.1
395,436 + +2.4
395,441 + +0.4
395,448 + +1.0
395,469 + +2.4

Or see this region's nucleotide sequence