Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00216

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00214 and MPMX26_00215 are separated by 47 nucleotidesMPMX26_00215 and MPMX26_00216 are separated by 306 nucleotidesMPMX26_00216 and MPMX26_00217 are separated by 382 nucleotides MPMX26_00214: MPMX26_00214 - hypothetical protein, at 229,572 to 229,862 _00214 MPMX26_00215: MPMX26_00215 - hypothetical protein, at 229,910 to 230,410 _00215 MPMX26_00216: MPMX26_00216 - hypothetical protein, at 230,717 to 232,129 _00216 MPMX26_00217: MPMX26_00217 - Outer membrane protein W, at 232,512 to 233,111 _00217 Position (kb) 230 231 232 233Strain fitness (log2 ratio) -2 -1 0 1 2 3at 229.721 kb on + strand, within MPMX26_00214at 229.726 kb on + strand, within MPMX26_00214at 229.728 kb on + strand, within MPMX26_00214at 229.728 kb on + strand, within MPMX26_00214at 229.752 kb on + strand, within MPMX26_00214at 229.752 kb on + strand, within MPMX26_00214at 229.764 kb on + strand, within MPMX26_00214at 229.817 kb on + strand, within MPMX26_00214at 229.934 kb on - strandat 230.112 kb on - strand, within MPMX26_00215at 230.232 kb on - strand, within MPMX26_00215at 230.775 kb on + strandat 230.825 kb on + strandat 230.825 kb on + strandat 230.825 kb on + strandat 230.825 kb on + strandat 230.825 kb on + strandat 230.836 kb on + strandat 230.836 kb on + strandat 230.836 kb on + strandat 230.864 kb on + strand, within MPMX26_00216at 230.864 kb on + strand, within MPMX26_00216at 230.864 kb on + strand, within MPMX26_00216at 230.864 kb on + strand, within MPMX26_00216at 230.864 kb on + strand, within MPMX26_00216at 230.893 kb on + strand, within MPMX26_00216at 230.893 kb on + strand, within MPMX26_00216at 230.893 kb on + strand, within MPMX26_00216at 230.895 kb on + strand, within MPMX26_00216at 230.903 kb on + strand, within MPMX26_00216at 230.903 kb on + strand, within MPMX26_00216at 230.903 kb on + strand, within MPMX26_00216at 230.903 kb on + strand, within MPMX26_00216at 230.903 kb on + strand, within MPMX26_00216at 230.903 kb on + strand, within MPMX26_00216at 230.903 kb on + strand, within MPMX26_00216at 230.905 kb on + strand, within MPMX26_00216at 230.911 kb on - strand, within MPMX26_00216at 230.913 kb on + strand, within MPMX26_00216at 230.921 kb on - strand, within MPMX26_00216at 230.923 kb on + strand, within MPMX26_00216at 230.923 kb on + strand, within MPMX26_00216at 230.923 kb on + strand, within MPMX26_00216at 230.923 kb on + strand, within MPMX26_00216at 230.958 kb on + strand, within MPMX26_00216at 230.966 kb on + strand, within MPMX26_00216at 230.972 kb on + strand, within MPMX26_00216at 230.982 kb on + strand, within MPMX26_00216at 230.982 kb on + strand, within MPMX26_00216at 230.982 kb on + strand, within MPMX26_00216at 230.982 kb on + strand, within MPMX26_00216at 230.982 kb on + strand, within MPMX26_00216at 230.982 kb on + strand, within MPMX26_00216at 230.982 kb on + strand, within MPMX26_00216at 231.028 kb on + strand, within MPMX26_00216at 231.097 kb on + strand, within MPMX26_00216at 231.109 kb on + strand, within MPMX26_00216at 231.158 kb on + strand, within MPMX26_00216at 231.170 kb on + strand, within MPMX26_00216at 231.177 kb on + strand, within MPMX26_00216at 231.187 kb on + strand, within MPMX26_00216at 231.270 kb on + strand, within MPMX26_00216at 231.313 kb on + strand, within MPMX26_00216at 231.323 kb on + strand, within MPMX26_00216at 231.323 kb on + strand, within MPMX26_00216at 231.356 kb on + strand, within MPMX26_00216at 231.358 kb on + strand, within MPMX26_00216at 231.370 kb on + strand, within MPMX26_00216at 231.370 kb on + strand, within MPMX26_00216at 231.382 kb on + strand, within MPMX26_00216at 231.427 kb on + strand, within MPMX26_00216at 231.451 kb on + strand, within MPMX26_00216at 231.487 kb on + strand, within MPMX26_00216at 231.493 kb on + strand, within MPMX26_00216at 231.521 kb on + strand, within MPMX26_00216at 231.563 kb on + strand, within MPMX26_00216at 231.563 kb on + strand, within MPMX26_00216at 231.568 kb on + strand, within MPMX26_00216at 231.568 kb on + strand, within MPMX26_00216at 231.568 kb on + strand, within MPMX26_00216at 231.586 kb on + strand, within MPMX26_00216at 231.606 kb on + strand, within MPMX26_00216at 231.632 kb on + strand, within MPMX26_00216at 231.660 kb on + strand, within MPMX26_00216at 231.670 kb on + strand, within MPMX26_00216at 231.670 kb on + strand, within MPMX26_00216at 231.670 kb on + strand, within MPMX26_00216at 231.670 kb on + strand, within MPMX26_00216at 231.670 kb on + strand, within MPMX26_00216at 231.670 kb on + strand, within MPMX26_00216at 231.670 kb on + strand, within MPMX26_00216at 231.670 kb on + strand, within MPMX26_00216at 231.670 kb on + strand, within MPMX26_00216at 231.670 kb on + strand, within MPMX26_00216at 231.670 kb on + strand, within MPMX26_00216at 231.670 kb on + strand, within MPMX26_00216at 231.672 kb on + strand, within MPMX26_00216at 231.737 kb on + strand, within MPMX26_00216at 231.751 kb on + strand, within MPMX26_00216at 231.751 kb on + strand, within MPMX26_00216at 231.751 kb on + strand, within MPMX26_00216at 231.751 kb on + strand, within MPMX26_00216at 231.751 kb on + strand, within MPMX26_00216at 231.795 kb on + strand, within MPMX26_00216at 231.795 kb on + strand, within MPMX26_00216at 231.795 kb on + strand, within MPMX26_00216at 231.835 kb on + strand, within MPMX26_00216at 231.848 kb on + strand, within MPMX26_00216at 231.862 kb on + strand, within MPMX26_00216at 231.862 kb on + strand, within MPMX26_00216at 231.862 kb on + strand, within MPMX26_00216at 231.878 kb on + strand, within MPMX26_00216at 231.906 kb on + strand, within MPMX26_00216at 231.908 kb on + strand, within MPMX26_00216at 231.926 kb on + strand, within MPMX26_00216at 231.946 kb on + strand, within MPMX26_00216at 231.946 kb on + strand, within MPMX26_00216at 231.946 kb on + strand, within MPMX26_00216at 231.946 kb on + strand, within MPMX26_00216at 231.946 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.962 kb on + strand, within MPMX26_00216at 231.967 kb on + strand, within MPMX26_00216at 232.058 kb on + strandat 232.058 kb on + strandat 232.078 kb on + strandat 232.093 kb on + strandat 232.093 kb on + strandat 232.093 kb on + strandat 232.093 kb on + strandat 232.571 kb on + strandat 232.581 kb on + strand, within MPMX26_00217at 232.608 kb on + strand, within MPMX26_00217at 232.669 kb on + strand, within MPMX26_00217at 232.892 kb on + strand, within MPMX26_00217at 232.923 kb on + strand, within MPMX26_00217at 232.923 kb on + strand, within MPMX26_00217at 232.928 kb on + strand, within MPMX26_00217at 232.928 kb on + strand, within MPMX26_00217at 232.928 kb on + strand, within MPMX26_00217at 232.928 kb on + strand, within MPMX26_00217at 232.928 kb on + strand, within MPMX26_00217at 232.982 kb on + strand, within MPMX26_00217at 232.992 kb on + strand, within MPMX26_00217at 233.008 kb on + strand, within MPMX26_00217at 233.008 kb on + strand, within MPMX26_00217at 233.018 kb on + strand, within MPMX26_00217at 233.018 kb on + strand, within MPMX26_00217at 233.018 kb on + strand, within MPMX26_00217at 233.018 kb on + strand, within MPMX26_00217at 233.034 kb on + strand, within MPMX26_00217at 233.078 kb on + strandat 233.078 kb on + strandat 233.078 kb on + strandat 233.078 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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229,721 + MPMX26_00214 0.51 +0.3
229,726 + MPMX26_00214 0.53 -0.6
229,728 + MPMX26_00214 0.54 +0.6
229,728 + MPMX26_00214 0.54 -0.8
229,752 + MPMX26_00214 0.62 -0.5
229,752 + MPMX26_00214 0.62 +0.2
229,764 + MPMX26_00214 0.66 +0.6
229,817 + MPMX26_00214 0.84 +0.4
229,934 - +1.1
230,112 - MPMX26_00215 0.40 +3.3
230,232 - MPMX26_00215 0.64 +0.3
230,775 + -0.1
230,825 + +0.8
230,825 + -1.7
230,825 + -0.6
230,825 + -0.4
230,825 + -0.3
230,836 + -0.0
230,836 + +0.7
230,836 + +0.9
230,864 + MPMX26_00216 0.10 -1.5
230,864 + MPMX26_00216 0.10 -1.3
230,864 + MPMX26_00216 0.10 +0.2
230,864 + MPMX26_00216 0.10 +0.1
230,864 + MPMX26_00216 0.10 -0.5
230,893 + MPMX26_00216 0.12 +0.4
230,893 + MPMX26_00216 0.12 +0.8
230,893 + MPMX26_00216 0.12 -1.0
230,895 + MPMX26_00216 0.13 +0.2
230,903 + MPMX26_00216 0.13 -0.2
230,903 + MPMX26_00216 0.13 +0.5
230,903 + MPMX26_00216 0.13 -0.3
230,903 + MPMX26_00216 0.13 -0.0
230,903 + MPMX26_00216 0.13 +0.2
230,903 + MPMX26_00216 0.13 -1.1
230,903 + MPMX26_00216 0.13 -0.8
230,905 + MPMX26_00216 0.13 -0.2
230,911 - MPMX26_00216 0.14 +2.4
230,913 + MPMX26_00216 0.14 -1.5
230,921 - MPMX26_00216 0.14 +1.3
230,923 + MPMX26_00216 0.15 -0.8
230,923 + MPMX26_00216 0.15 -0.8
230,923 + MPMX26_00216 0.15 -0.4
230,923 + MPMX26_00216 0.15 +0.2
230,958 + MPMX26_00216 0.17 +0.2
230,966 + MPMX26_00216 0.18 -0.1
230,972 + MPMX26_00216 0.18 +1.9
230,982 + MPMX26_00216 0.19 -0.4
230,982 + MPMX26_00216 0.19 +0.0
230,982 + MPMX26_00216 0.19 +0.1
230,982 + MPMX26_00216 0.19 +0.9
230,982 + MPMX26_00216 0.19 -1.6
230,982 + MPMX26_00216 0.19 +0.0
230,982 + MPMX26_00216 0.19 +1.4
231,028 + MPMX26_00216 0.22 -0.6
231,097 + MPMX26_00216 0.27 +0.1
231,109 + MPMX26_00216 0.28 -0.4
231,158 + MPMX26_00216 0.31 -0.1
231,170 + MPMX26_00216 0.32 +1.0
231,177 + MPMX26_00216 0.33 +0.7
231,187 + MPMX26_00216 0.33 -0.2
231,270 + MPMX26_00216 0.39 -0.6
231,313 + MPMX26_00216 0.42 -0.3
231,323 + MPMX26_00216 0.43 -1.7
231,323 + MPMX26_00216 0.43 -1.5
231,356 + MPMX26_00216 0.45 -0.3
231,358 + MPMX26_00216 0.45 +0.1
231,370 + MPMX26_00216 0.46 +0.4
231,370 + MPMX26_00216 0.46 +0.3
231,382 + MPMX26_00216 0.47 -0.7
231,427 + MPMX26_00216 0.50 +0.5
231,451 + MPMX26_00216 0.52 +0.3
231,487 + MPMX26_00216 0.54 +0.9
231,493 + MPMX26_00216 0.55 -0.1
231,521 + MPMX26_00216 0.57 -1.0
231,563 + MPMX26_00216 0.60 -0.4
231,563 + MPMX26_00216 0.60 -0.0
231,568 + MPMX26_00216 0.60 +0.2
231,568 + MPMX26_00216 0.60 -0.4
231,568 + MPMX26_00216 0.60 +0.2
231,586 + MPMX26_00216 0.62 +0.0
231,606 + MPMX26_00216 0.63 -1.3
231,632 + MPMX26_00216 0.65 +0.1
231,660 + MPMX26_00216 0.67 +0.7
231,670 + MPMX26_00216 0.67 -0.5
231,670 + MPMX26_00216 0.67 -2.1
231,670 + MPMX26_00216 0.67 -1.5
231,670 + MPMX26_00216 0.67 -0.9
231,670 + MPMX26_00216 0.67 -0.2
231,670 + MPMX26_00216 0.67 +0.2
231,670 + MPMX26_00216 0.67 +0.8
231,670 + MPMX26_00216 0.67 +1.7
231,670 + MPMX26_00216 0.67 -0.1
231,670 + MPMX26_00216 0.67 +0.8
231,670 + MPMX26_00216 0.67 +0.2
231,670 + MPMX26_00216 0.67 +0.6
231,672 + MPMX26_00216 0.68 -0.6
231,737 + MPMX26_00216 0.72 -0.8
231,751 + MPMX26_00216 0.73 -0.9
231,751 + MPMX26_00216 0.73 -0.3
231,751 + MPMX26_00216 0.73 -0.4
231,751 + MPMX26_00216 0.73 -0.2
231,751 + MPMX26_00216 0.73 -0.8
231,795 + MPMX26_00216 0.76 +0.1
231,795 + MPMX26_00216 0.76 +0.5
231,795 + MPMX26_00216 0.76 -0.9
231,835 + MPMX26_00216 0.79 -1.9
231,848 + MPMX26_00216 0.80 -0.9
231,862 + MPMX26_00216 0.81 -1.2
231,862 + MPMX26_00216 0.81 -0.9
231,862 + MPMX26_00216 0.81 -1.2
231,878 + MPMX26_00216 0.82 -1.0
231,906 + MPMX26_00216 0.84 +0.8
231,908 + MPMX26_00216 0.84 -0.3
231,926 + MPMX26_00216 0.86 -1.0
231,946 + MPMX26_00216 0.87 +1.8
231,946 + MPMX26_00216 0.87 -0.9
231,946 + MPMX26_00216 0.87 -2.5
231,946 + MPMX26_00216 0.87 +0.4
231,946 + MPMX26_00216 0.87 +1.4
231,962 + MPMX26_00216 0.88 -0.4
231,962 + MPMX26_00216 0.88 -0.6
231,962 + MPMX26_00216 0.88 -0.2
231,962 + MPMX26_00216 0.88 -1.0
231,962 + MPMX26_00216 0.88 -0.5
231,962 + MPMX26_00216 0.88 -0.8
231,962 + MPMX26_00216 0.88 +1.4
231,962 + MPMX26_00216 0.88 +0.8
231,962 + MPMX26_00216 0.88 -0.7
231,962 + MPMX26_00216 0.88 +0.2
231,962 + MPMX26_00216 0.88 -0.5
231,962 + MPMX26_00216 0.88 +0.0
231,962 + MPMX26_00216 0.88 +0.3
231,967 + MPMX26_00216 0.88 -0.1
232,058 + +0.5
232,058 + -0.5
232,078 + +0.8
232,093 + -1.3
232,093 + -1.1
232,093 + -0.1
232,093 + +0.3
232,571 + +0.7
232,581 + MPMX26_00217 0.12 -0.9
232,608 + MPMX26_00217 0.16 -0.6
232,669 + MPMX26_00217 0.26 -0.5
232,892 + MPMX26_00217 0.63 +0.9
232,923 + MPMX26_00217 0.69 +0.6
232,923 + MPMX26_00217 0.69 +0.6
232,928 + MPMX26_00217 0.69 +0.2
232,928 + MPMX26_00217 0.69 -0.2
232,928 + MPMX26_00217 0.69 +0.3
232,928 + MPMX26_00217 0.69 +1.0
232,928 + MPMX26_00217 0.69 -0.4
232,982 + MPMX26_00217 0.78 +1.1
232,992 + MPMX26_00217 0.80 -1.0
233,008 + MPMX26_00217 0.83 +0.5
233,008 + MPMX26_00217 0.83 -0.1
233,018 + MPMX26_00217 0.84 +0.0
233,018 + MPMX26_00217 0.84 -0.3
233,018 + MPMX26_00217 0.84 +0.2
233,018 + MPMX26_00217 0.84 -0.1
233,034 + MPMX26_00217 0.87 +1.1
233,078 + -0.2
233,078 + +0.2
233,078 + -0.4
233,078 + +0.3

Or see this region's nucleotide sequence