Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5806
Experiment: Ying_Others16 rep B; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Ying_Others16 rep B; time point 1 |
|---|---|---|---|---|---|
| remove | |||||
| 2,619,969 | - | +0.3 | |||
| 2,620,088 | + | +0.5 | |||
| 2,620,088 | + | -0.4 | |||
| 2,620,089 | - | GFF5806 | 0.11 | +0.3 | |
| 2,620,206 | + | -0.0 | |||
| 2,620,206 | + | -1.3 | |||
| 2,620,390 | - | +0.5 | |||
| 2,620,891 | + | GFF5602 | 0.47 | +0.1 | |
| 2,620,892 | - | GFF5602 | 0.47 | +1.7 |
Or see this region's nucleotide sequence