Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5357

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
2,358,681	-		GFF5355	0.46	-0.2
2,359,078	-		GFF5355	0.86	+0.8
2,359,377	+		GFF5356	0.34	-0.4
2,359,378	-		GFF5356	0.35	+0.1
2,359,641	-				-0.1
2,359,715	+		GFF5357	0.11	-1.6
2,359,715	+		GFF5357	0.11	-0.4
2,359,716	-		GFF5357	0.11	-1.3
2,360,103	-		GFF5357	0.54	-1.0
2,360,103	-		GFF5357	0.54	-0.2
2,360,103	-		GFF5357	0.54	-1.3
2,360,103	-		GFF5357	0.54	+0.3
2,360,713	-				+0.5
2,360,929	+		GFF5358	0.20	+0.6
2,360,944	+		GFF5358	0.20	+0.4
2,360,945	-		GFF5358	0.20	+0.2