Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5166

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
2,182,401	-		GFF5165	0.71	+0.4
2,182,691	+		GFF5165	0.80	+1.5
2,182,691	+		GFF5165	0.80	+0.0
2,182,692	-		GFF5165	0.80	-0.9
2,182,692	-		GFF5165	0.80	-0.1
2,182,715	+		GFF5165	0.81	-0.3
2,182,716	-		GFF5165	0.81	-0.5
2,182,716	-		GFF5165	0.81	-0.1
2,182,716	-		GFF5165	0.81	-0.7
2,182,853	+		GFF5165	0.85	+1.5
2,182,853	+		GFF5165	0.85	-1.4
2,182,853	+		GFF5165	0.85	-0.4
2,182,854	-		GFF5165	0.85	-0.2
2,182,919	+		GFF5165	0.87	+0.1
2,182,919	+		GFF5165	0.87	+1.5
2,182,919	+		GFF5165	0.87	+0.2
2,182,919	+		GFF5165	0.87	-0.2
2,182,920	-		GFF5165	0.87	-0.4
2,182,920	-		GFF5165	0.87	+0.0
2,183,192	+				+1.3
2,183,193	-				+1.1
2,183,193	-				-0.3
2,183,193	-				+0.6
2,183,428	+		GFF5166	0.21	-0.6
2,183,428	+		GFF5166	0.21	-0.2
2,183,437	+		GFF5166	0.23	-0.5
2,183,438	-		GFF5166	0.23	-1.3
2,183,438	-		GFF5166	0.23	-0.7
2,183,438	-		GFF5166	0.23	-0.0
2,183,528	-		GFF5166	0.45	-0.2
2,183,581	+		GFF5166	0.57	+0.3