Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5026

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
2,039,183	+		GFF5024	0.41	-0.5
2,039,184	-		GFF5024	0.41	-0.1
2,039,184	-		GFF5024	0.41	-0.2
2,039,225	+		GFF5024	0.45	-0.0
2,039,225	+		GFF5024	0.45	-0.1
2,039,226	-		GFF5024	0.45	-0.6
2,039,270	+		GFF5024	0.49	-0.1
2,039,270	+		GFF5024	0.49	-0.5
2,039,270	+		GFF5024	0.49	-0.2
2,039,271	-		GFF5024	0.49	-0.1
2,039,271	-		GFF5024	0.49	-1.1
2,039,300	+		GFF5024	0.52	+0.1
2,039,301	-		GFF5024	0.52	+0.4
2,039,301	-		GFF5024	0.52	-0.9
2,039,423	+		GFF5024	0.64	-0.0
2,039,475	-		GFF5024	0.69	-0.3
2,039,475	-		GFF5024	0.69	+0.0
2,039,794	+				-0.1
2,039,857	-				+0.6
2,039,925	+		GFF5025	0.38	-0.5
2,039,926	-		GFF5025	0.39	+0.1
2,039,926	-		GFF5025	0.39	-0.5
2,040,123	+		GFF5026	0.16	-0.7
2,040,289	-		GFF5026	0.30	+1.3
2,040,529	-		GFF5026	0.50	-0.0
2,040,561	+		GFF5026	0.53	-0.5
2,040,582	+		GFF5026	0.54	-0.3
2,040,583	-		GFF5026	0.54	+0.1
2,040,583	-		GFF5026	0.54	+1.1
2,040,583	-		GFF5026	0.54	-0.4
2,040,975	+		GFF5026	0.87	-0.0
2,041,145	+				+0.7
2,041,146	-				+1.2
2,041,150	-				+0.3
2,041,347	+		GFF5027	0.11	-0.7
2,041,348	-		GFF5027	0.11	+1.0
2,041,368	+		GFF5027	0.13	-1.1
2,041,377	+		GFF5027	0.14	+1.2
2,041,731	+		GFF5027	0.49	-0.6
2,041,732	-		GFF5027	0.49	-1.0
2,041,807	-		GFF5027	0.56	+1.0
2,041,807	-		GFF5027	0.56	+0.3
2,041,807	-		GFF5027	0.56	+0.2
2,041,807	-		GFF5027	0.56	-0.0
2,041,908	+		GFF5027	0.66	-0.3
2,041,909	-		GFF5027	0.66	+0.5
2,041,909	-		GFF5027	0.66	+0.5
2,041,950	+		GFF5027	0.70	+0.4
2,041,951	-		GFF5027	0.70	+0.2
2,042,040	+		GFF5027	0.79	-0.3
2,042,056	-		GFF5027	0.81	-0.1
2,042,056	-		GFF5027	0.81	+1.5
2,042,095	-		GFF5027	0.84	+0.3
2,042,127	+		GFF5027	0.88	-0.1