Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4813

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
1,822,572	-				+0.4
1,822,603	+				-0.1
1,822,603	+				+0.1
1,822,603	+				+0.2
1,822,766	+		GFF4811	0.25	+0.2
1,822,766	+		GFF4811	0.25	-0.2
1,822,766	+		GFF4811	0.25	-0.5
1,822,767	-		GFF4811	0.25	-0.7
1,822,767	-		GFF4811	0.25	+0.3
1,823,225	+				-0.8
1,823,225	+				+0.3
1,823,225	+				+0.2
1,823,225	+				-0.6
1,823,225	+				+0.7
1,823,226	-				-0.4
1,823,673	-		GFF4813	0.15	+0.5
1,823,673	-		GFF4813	0.15	-0.1
1,823,673	-		GFF4813	0.15	-0.3
1,823,785	+		GFF4813	0.28	-0.3
1,823,785	+		GFF4813	0.28	+1.6
1,823,786	-		GFF4813	0.28	+0.1
1,824,130	+		GFF4813	0.70	+0.3
1,824,130	+		GFF4813	0.70	+0.4
1,824,130	+		GFF4813	0.70	-1.0
1,824,130	+		GFF4813	0.70	-0.2
1,824,130	+		GFF4813	0.70	-0.3
1,824,131	-		GFF4813	0.70	+0.7
1,824,131	-		GFF4813	0.70	-0.3
1,824,131	-		GFF4813	0.70	+0.4
1,824,131	-		GFF4813	0.70	+0.0
1,824,131	-		GFF4813	0.70	-0.3
1,824,136	+		GFF4813	0.71	-0.6
1,824,136	+		GFF4813	0.71	-0.6
1,824,136	+		GFF4813	0.71	+0.2
1,824,136	+		GFF4813	0.71	-0.5
1,824,136	+		GFF4813	0.71	+1.5
1,824,136	+		GFF4813	0.71	-0.3
1,824,136	+		GFF4813	0.71	-0.2
1,824,137	-		GFF4813	0.71	-0.2
1,824,137	-		GFF4813	0.71	-0.1
1,824,137	-		GFF4813	0.71	-0.2
1,824,137	-		GFF4813	0.71	-0.1
1,824,137	-		GFF4813	0.71	-0.4
1,824,137	-		GFF4813	0.71	+0.1
1,824,137	-		GFF4813	0.71	+0.3
1,824,137	-		GFF4813	0.71	-0.3
1,824,137	-		GFF4813	0.71	-0.5
1,824,289	+		GFF4813	0.90	-0.8
1,824,515	+				-0.2
1,824,515	+				+0.1
1,824,515	+				+0.3
1,824,749	+		GFF4814	0.16	-0.3
1,824,749	+		GFF4814	0.16	-0.7
1,824,749	+		GFF4814	0.16	+0.1
1,824,750	-		GFF4814	0.16	+0.5
1,824,750	-		GFF4814	0.16	+0.1
1,824,750	-		GFF4814	0.16	-0.7
1,824,750	-		GFF4814	0.16	+0.1
1,824,750	-		GFF4814	0.16	+0.3
1,824,782	+		GFF4814	0.18	-0.4
1,824,953	+		GFF4814	0.25	-0.1
1,824,953	+		GFF4814	0.25	+0.2
1,824,953	+		GFF4814	0.25	-1.1
1,824,954	-		GFF4814	0.25	-0.2
1,824,954	-		GFF4814	0.25	+0.3
1,825,026	-		GFF4814	0.28	+0.1
1,825,026	-		GFF4814	0.28	+0.1
1,825,062	-		GFF4814	0.30	-1.1
1,825,088	+		GFF4814	0.31	-1.2
1,825,089	-		GFF4814	0.31	+1.1
1,825,148	+		GFF4814	0.33	+0.2
1,825,149	-		GFF4814	0.33	+0.2
1,825,203	-		GFF4814	0.36	+1.0
1,825,203	-		GFF4814	0.36	+0.0
1,825,262	+		GFF4814	0.38	+0.4
1,825,262	+		GFF4814	0.38	-1.1
1,825,263	-		GFF4814	0.38	+0.2
1,825,263	-		GFF4814	0.38	+0.3
1,825,263	-		GFF4814	0.38	+0.1
1,825,263	-		GFF4814	0.38	+0.4