Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4621

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
1,568,224	-		GFF4620	0.52	-0.3
1,568,295	+		GFF4620	0.59	-0.3
1,568,295	+		GFF4620	0.59	-0.5
1,568,296	-		GFF4620	0.59	+0.8
1,568,296	-		GFF4620	0.59	-0.1
1,568,296	-		GFF4620	0.59	+0.4
1,568,419	-		GFF4620	0.73	-1.3
1,568,569	-		GFF4620	0.88	+0.1
1,568,569	-		GFF4620	0.88	-0.5
1,568,688	-				-0.1
1,568,716	-				-0.4
1,568,786	+				-0.9
1,568,787	-				+1.5
1,568,831	+				+0.2
1,568,831	+				-0.3
1,568,831	+				-0.6
1,568,831	+				-0.6
1,568,831	+				+0.4
1,568,832	-				-0.2
1,568,832	-				+0.3
1,568,832	-				-0.7
1,569,047	+		GFF4621	0.20	-0.3
1,569,047	+		GFF4621	0.20	+1.1
1,569,048	-		GFF4621	0.20	-0.1
1,569,165	-		GFF4621	0.29	-0.3
1,569,207	-		GFF4621	0.32	-0.8
1,569,207	-		GFF4621	0.32	-0.8
1,569,516	-		GFF4621	0.55	-0.0
1,569,516	-		GFF4621	0.55	-0.8
1,569,714	-		GFF4621	0.70	-0.9
1,569,806	+		GFF4621	0.77	+0.1
1,569,806	+		GFF4621	0.77	-0.4
1,569,806	+		GFF4621	0.77	+0.4
1,569,806	+		GFF4621	0.77	-0.1
1,569,806	+		GFF4621	0.77	+0.3
1,569,807	-		GFF4621	0.77	+0.2
1,569,807	-		GFF4621	0.77	-0.1
1,569,938	+		GFF4621	0.87	+0.1
1,569,939	-		GFF4621	0.87	-0.3
1,570,005	-				-1.3
1,570,158	+				-0.3
1,570,159	-				+0.0
1,570,165	-				+0.1
1,570,468	-				-0.2
1,570,468	-				-0.5
1,570,799	-				+0.0
1,571,050	+				+0.2