Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4461

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
1,387,735	+				+0.2
1,387,735	+				+0.3
1,387,736	-				-0.5
1,388,103	-		GFF4459	0.84	+0.2
1,388,342	+		GFF4460	0.44	-0.4
1,388,343	-		GFF4460	0.45	+0.1
1,388,343	-		GFF4460	0.45	-0.1
1,388,487	-		GFF4460	0.86	+0.1
1,389,058	+		GFF4461	0.59	-0.1
1,389,058	+		GFF4461	0.59	+0.7
1,389,317	-		GFF4461	0.89	+0.6
1,389,317	-		GFF4461	0.89	+0.7
1,389,361	+				-0.7
1,389,987	+		GFF4462	0.47	-0.4
1,389,996	+		GFF4462	0.48	-0.2
1,389,996	+		GFF4462	0.48	+0.7
1,389,997	-		GFF4462	0.48	-0.6
1,389,997	-		GFF4462	0.48	-0.1
1,389,997	-		GFF4462	0.48	+0.2
1,390,173	+		GFF4462	0.63	-0.1
1,390,414	-		GFF4462	0.82	+0.3