Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1575

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
430,263	-		GFF1574	0.22	-0.1
430,421	+		GFF1574	0.42	-0.3
430,421	+		GFF1574	0.42	+0.2
430,936	+				-0.6
430,937	-				-0.3
430,937	-				+0.1
430,938	+				-3.6
430,938	+				-1.3
430,939	-				-1.6
430,939	-				-4.0
431,159	+		GFF1575	0.18	-4.1
431,252	+		GFF1575	0.33	-2.7
431,312	+		GFF1575	0.42	-3.9
431,508	-		GFF1575	0.72	-4.7
431,780	+				-0.0
431,780	+				+0.7
431,781	-				-0.4
432,261	-		GFF1576	0.61	+0.1
432,261	-		GFF1576	0.61	-0.2
432,416	+		GFF1576	0.78	-0.5
432,416	+		GFF1576	0.78	-0.3