Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1558

Experiment: Ying_Others16 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 1
413,172	+		GFF1557	0.30	+1.5
413,208	+		GFF1557	0.34	-0.0
413,208	+		GFF1557	0.34	+0.1
413,253	+		GFF1557	0.38	-0.2
413,254	-		GFF1557	0.39	-0.9
413,254	-		GFF1557	0.39	-0.2
413,300	+		GFF1557	0.43	-0.6
413,347	-		GFF1557	0.48	+0.8
413,808	+				+0.1
414,245	-		GFF1558	0.66	-0.8
414,872	-		GFF1559	0.55	-0.3
414,872	-		GFF1559	0.55	-0.5
414,921	+		GFF1559	0.62	+0.1
414,921	+		GFF1559	0.62	-0.6
414,922	-		GFF1559	0.62	-0.1
415,418	+		GFF1560	0.16	+0.4
415,419	-		GFF1560	0.16	-0.4