Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03106 and MPMX26_03107 are separated by 213 nucleotides MPMX26_03107 and MPMX26_03108 are separated by 134 nucleotides MPMX26_03108 and MPMX26_03109 are separated by 243 nucleotides MPMX26_03109 and MPMX26_03110 are separated by 173 nucleotides
MPMX26_03106: MPMX26_03106 - IS6 family transposase IS1008, at 20,309 to 21,013
_03106
MPMX26_03107: MPMX26_03107 - putative cysteine-rich protein YhjQ, at 21,227 to 21,559
_03107
MPMX26_03108: MPMX26_03108 - IS6 family transposase IS1007, at 21,694 to 22,398
_03108
MPMX26_03109: MPMX26_03109 - NADPH-dependent FMN reductase ArsH, at 22,642 to 23,175
_03109
MPMX26_03110: MPMX26_03110 - hypothetical protein, at 23,349 to 23,549
_03110
Position (kb) 21
22
23 Strain fitness (log2 ratio) -2
-1
0
1
2 at 20.931 kb on - strand, within MPMX26_03106 at 21.255 kb on + strand at 21.273 kb on + strand, within MPMX26_03107 at 21.278 kb on + strand, within MPMX26_03107 at 21.345 kb on + strand, within MPMX26_03107 at 21.345 kb on + strand, within MPMX26_03107 at 21.347 kb on + strand, within MPMX26_03107 at 21.352 kb on + strand, within MPMX26_03107 at 21.357 kb on + strand, within MPMX26_03107 at 21.366 kb on + strand, within MPMX26_03107 at 21.382 kb on + strand, within MPMX26_03107 at 21.387 kb on + strand, within MPMX26_03107 at 21.387 kb on + strand, within MPMX26_03107 at 21.436 kb on + strand, within MPMX26_03107 at 21.448 kb on + strand, within MPMX26_03107 at 21.448 kb on + strand, within MPMX26_03107 at 21.452 kb on + strand, within MPMX26_03107 at 21.452 kb on + strand, within MPMX26_03107 at 21.452 kb on + strand, within MPMX26_03107 at 21.452 kb on + strand, within MPMX26_03107 at 21.452 kb on + strand, within MPMX26_03107 at 21.452 kb on + strand, within MPMX26_03107 at 21.452 kb on + strand, within MPMX26_03107 at 21.462 kb on + strand, within MPMX26_03107 at 21.462 kb on + strand, within MPMX26_03107 at 21.462 kb on + strand, within MPMX26_03107 at 21.462 kb on + strand, within MPMX26_03107 at 21.467 kb on + strand, within MPMX26_03107 at 21.471 kb on + strand, within MPMX26_03107 at 21.481 kb on + strand, within MPMX26_03107 at 21.482 kb on + strand, within MPMX26_03107 at 21.488 kb on + strand, within MPMX26_03107 at 21.507 kb on + strand, within MPMX26_03107 at 21.507 kb on + strand, within MPMX26_03107 at 21.507 kb on + strand, within MPMX26_03107 at 21.507 kb on + strand, within MPMX26_03107 at 21.520 kb on + strand, within MPMX26_03107 at 21.768 kb on - strand, within MPMX26_03108 at 21.924 kb on - strand, within MPMX26_03108 at 21.963 kb on - strand, within MPMX26_03108 at 21.981 kb on - strand, within MPMX26_03108 at 21.981 kb on - strand, within MPMX26_03108 at 22.131 kb on - strand, within MPMX26_03108 at 22.131 kb on - strand, within MPMX26_03108 at 22.131 kb on - strand, within MPMX26_03108 at 22.316 kb on - strand, within MPMX26_03108 at 22.559 kb on - strand at 22.573 kb on - strand at 22.629 kb on - strand at 22.631 kb on - strand at 22.631 kb on - strand at 22.631 kb on - strand at 22.973 kb on - strand, within MPMX26_03109 at 23.340 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 20,931 - MPMX26_03106 0.88 +0.9 21,255 + -1.0 21,273 + MPMX26_03107 0.14 -0.5 21,278 + MPMX26_03107 0.15 +0.1 21,345 + MPMX26_03107 0.35 -0.4 21,345 + MPMX26_03107 0.35 -0.2 21,347 + MPMX26_03107 0.36 +0.5 21,352 + MPMX26_03107 0.38 +1.1 21,357 + MPMX26_03107 0.39 -0.9 21,366 + MPMX26_03107 0.42 +1.3 21,382 + MPMX26_03107 0.47 -1.7 21,387 + MPMX26_03107 0.48 +0.0 21,387 + MPMX26_03107 0.48 -1.1 21,436 + MPMX26_03107 0.63 +0.1 21,448 + MPMX26_03107 0.66 -0.6 21,448 + MPMX26_03107 0.66 -1.9 21,452 + MPMX26_03107 0.68 -0.3 21,452 + MPMX26_03107 0.68 -0.9 21,452 + MPMX26_03107 0.68 -0.8 21,452 + MPMX26_03107 0.68 -0.9 21,452 + MPMX26_03107 0.68 +1.3 21,452 + MPMX26_03107 0.68 -1.1 21,452 + MPMX26_03107 0.68 -0.3 21,462 + MPMX26_03107 0.71 +0.2 21,462 + MPMX26_03107 0.71 -0.0 21,462 + MPMX26_03107 0.71 -0.4 21,462 + MPMX26_03107 0.71 -0.2 21,467 + MPMX26_03107 0.72 -0.4 21,471 + MPMX26_03107 0.73 +1.7 21,481 + MPMX26_03107 0.76 -1.4 21,482 + MPMX26_03107 0.77 +0.2 21,488 + MPMX26_03107 0.78 +0.9 21,507 + MPMX26_03107 0.84 -0.6 21,507 + MPMX26_03107 0.84 -0.4 21,507 + MPMX26_03107 0.84 +0.3 21,507 + MPMX26_03107 0.84 +0.5 21,520 + MPMX26_03107 0.88 -1.3 21,768 - MPMX26_03108 0.10 +1.1 21,924 - MPMX26_03108 0.33 +0.2 21,963 - MPMX26_03108 0.38 +1.7 21,981 - MPMX26_03108 0.41 +1.3 21,981 - MPMX26_03108 0.41 +2.7 22,131 - MPMX26_03108 0.62 +0.2 22,131 - MPMX26_03108 0.62 +1.9 22,131 - MPMX26_03108 0.62 +0.9 22,316 - MPMX26_03108 0.88 -0.0 22,559 - +0.7 22,573 - +1.5 22,629 - +1.3 22,631 - -0.2 22,631 - -0.5 22,631 - -0.3 22,973 - MPMX26_03109 0.62 +1.3 23,340 - -0.1
Or see this region's nucleotide sequence