Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03065 and MPMX26_03066 are separated by 91 nucleotides MPMX26_03066 and MPMX26_03067 are separated by 98 nucleotides MPMX26_03067 and MPMX26_03068 are separated by 52 nucleotides MPMX26_03068 and MPMX26_03069 are separated by 175 nucleotides
MPMX26_03065: MPMX26_03065 - hypothetical protein, at 3,188,457 to 3,188,726
_03065
MPMX26_03066: MPMX26_03066 - putative thiol:disulfide interchange protein DsbC, at 3,188,818 to 3,189,531
_03066
MPMX26_03067: MPMX26_03067 - Cadmium, cobalt and zinc/H(+)-K(+) antiporter, at 3,189,630 to 3,190,601
_03067
MPMX26_03068: MPMX26_03068 - Transcriptional repressor RcnR, at 3,190,654 to 3,190,917
_03068
MPMX26_03069: MPMX26_03069 - hypothetical protein, at 3,191,093 to 3,192,235
_03069
Position (kb)
3189
3190
3191 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3188.851 kb on - strand at 3188.852 kb on - strand at 3188.875 kb on - strand at 3188.875 kb on - strand at 3188.875 kb on - strand at 3188.910 kb on - strand, within MPMX26_03066 at 3188.912 kb on - strand, within MPMX26_03066 at 3188.947 kb on - strand, within MPMX26_03066 at 3188.947 kb on - strand, within MPMX26_03066 at 3188.966 kb on - strand, within MPMX26_03066 at 3188.966 kb on - strand, within MPMX26_03066 at 3188.966 kb on - strand, within MPMX26_03066 at 3188.979 kb on - strand, within MPMX26_03066 at 3188.979 kb on - strand, within MPMX26_03066 at 3188.979 kb on - strand, within MPMX26_03066 at 3188.991 kb on - strand, within MPMX26_03066 at 3188.993 kb on - strand, within MPMX26_03066 at 3189.014 kb on - strand, within MPMX26_03066 at 3189.026 kb on - strand, within MPMX26_03066 at 3189.026 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.029 kb on - strand, within MPMX26_03066 at 3189.038 kb on - strand, within MPMX26_03066 at 3189.038 kb on - strand, within MPMX26_03066 at 3189.040 kb on - strand, within MPMX26_03066 at 3189.041 kb on - strand, within MPMX26_03066 at 3189.046 kb on - strand, within MPMX26_03066 at 3189.046 kb on - strand, within MPMX26_03066 at 3189.046 kb on - strand, within MPMX26_03066 at 3189.046 kb on - strand, within MPMX26_03066 at 3189.046 kb on - strand, within MPMX26_03066 at 3189.046 kb on - strand, within MPMX26_03066 at 3189.046 kb on - strand, within MPMX26_03066 at 3189.046 kb on - strand, within MPMX26_03066 at 3189.079 kb on - strand, within MPMX26_03066 at 3189.131 kb on - strand, within MPMX26_03066 at 3189.196 kb on - strand, within MPMX26_03066 at 3189.196 kb on - strand, within MPMX26_03066 at 3189.196 kb on - strand, within MPMX26_03066 at 3189.201 kb on - strand, within MPMX26_03066 at 3189.201 kb on - strand, within MPMX26_03066 at 3189.201 kb on - strand, within MPMX26_03066 at 3189.201 kb on - strand, within MPMX26_03066 at 3189.201 kb on - strand, within MPMX26_03066 at 3189.201 kb on - strand, within MPMX26_03066 at 3189.211 kb on - strand, within MPMX26_03066 at 3189.211 kb on - strand, within MPMX26_03066 at 3189.211 kb on - strand, within MPMX26_03066 at 3189.211 kb on - strand, within MPMX26_03066 at 3189.211 kb on - strand, within MPMX26_03066 at 3189.211 kb on - strand, within MPMX26_03066 at 3189.255 kb on - strand, within MPMX26_03066 at 3189.288 kb on - strand, within MPMX26_03066 at 3189.313 kb on - strand, within MPMX26_03066 at 3189.323 kb on - strand, within MPMX26_03066 at 3189.363 kb on - strand, within MPMX26_03066 at 3189.363 kb on - strand, within MPMX26_03066 at 3189.363 kb on - strand, within MPMX26_03066 at 3189.363 kb on - strand, within MPMX26_03066 at 3189.373 kb on - strand, within MPMX26_03066 at 3189.373 kb on - strand, within MPMX26_03066 at 3189.373 kb on - strand, within MPMX26_03066 at 3189.373 kb on - strand, within MPMX26_03066 at 3189.373 kb on - strand, within MPMX26_03066 at 3189.373 kb on - strand, within MPMX26_03066 at 3189.373 kb on - strand, within MPMX26_03066 at 3189.390 kb on - strand, within MPMX26_03066 at 3189.394 kb on - strand, within MPMX26_03066 at 3189.400 kb on - strand, within MPMX26_03066 at 3189.400 kb on - strand, within MPMX26_03066 at 3189.427 kb on - strand, within MPMX26_03066 at 3189.427 kb on - strand, within MPMX26_03066 at 3189.427 kb on - strand, within MPMX26_03066 at 3189.427 kb on - strand, within MPMX26_03066 at 3189.427 kb on - strand, within MPMX26_03066 at 3189.427 kb on - strand, within MPMX26_03066 at 3189.427 kb on - strand, within MPMX26_03066 at 3189.427 kb on - strand, within MPMX26_03066 at 3189.437 kb on - strand, within MPMX26_03066 at 3189.447 kb on - strand, within MPMX26_03066 at 3189.447 kb on - strand, within MPMX26_03066 at 3189.452 kb on - strand, within MPMX26_03066 at 3189.457 kb on - strand, within MPMX26_03066 at 3189.457 kb on - strand, within MPMX26_03066 at 3189.459 kb on - strand, within MPMX26_03066 at 3189.478 kb on - strand at 3189.481 kb on - strand at 3189.481 kb on - strand at 3189.490 kb on - strand at 3189.714 kb on - strand at 3189.714 kb on - strand at 3189.890 kb on - strand, within MPMX26_03067 at 3189.920 kb on - strand, within MPMX26_03067 at 3189.939 kb on - strand, within MPMX26_03067 at 3190.148 kb on - strand, within MPMX26_03067 at 3190.461 kb on - strand, within MPMX26_03067 at 3190.514 kb on - strand at 3190.522 kb on - strand at 3190.522 kb on - strand at 3190.546 kb on + strand at 3190.554 kb on - strand at 3190.701 kb on + strand, within MPMX26_03068 at 3190.701 kb on + strand, within MPMX26_03068 at 3190.713 kb on + strand, within MPMX26_03068 at 3190.713 kb on + strand, within MPMX26_03068 at 3190.713 kb on + strand, within MPMX26_03068 at 3190.732 kb on + strand, within MPMX26_03068 at 3190.765 kb on + strand, within MPMX26_03068 at 3190.783 kb on + strand, within MPMX26_03068 at 3190.821 kb on + strand, within MPMX26_03068 at 3190.821 kb on + strand, within MPMX26_03068 at 3190.821 kb on + strand, within MPMX26_03068 at 3191.028 kb on + strand at 3191.039 kb on + strand at 3191.100 kb on + strand at 3191.114 kb on + strand at 3191.122 kb on + strand at 3191.216 kb on + strand, within MPMX26_03069 at 3191.226 kb on + strand, within MPMX26_03069 at 3191.285 kb on + strand, within MPMX26_03069 at 3191.390 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.459 kb on + strand, within MPMX26_03069 at 3191.498 kb on + strand, within MPMX26_03069
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 3,188,851 - -0.5 3,188,852 - -0.1 3,188,875 - +0.7 3,188,875 - -0.6 3,188,875 - -0.3 3,188,910 - MPMX26_03066 0.13 +0.2 3,188,912 - MPMX26_03066 0.13 -0.7 3,188,947 - MPMX26_03066 0.18 -0.0 3,188,947 - MPMX26_03066 0.18 +0.1 3,188,966 - MPMX26_03066 0.21 -0.7 3,188,966 - MPMX26_03066 0.21 +0.4 3,188,966 - MPMX26_03066 0.21 -0.1 3,188,979 - MPMX26_03066 0.23 -0.9 3,188,979 - MPMX26_03066 0.23 +0.7 3,188,979 - MPMX26_03066 0.23 +0.0 3,188,991 - MPMX26_03066 0.24 +0.9 3,188,993 - MPMX26_03066 0.25 -0.6 3,189,014 - MPMX26_03066 0.27 -0.4 3,189,026 - MPMX26_03066 0.29 -0.8 3,189,026 - MPMX26_03066 0.29 -0.4 3,189,029 - MPMX26_03066 0.30 +0.9 3,189,029 - MPMX26_03066 0.30 +0.1 3,189,029 - MPMX26_03066 0.30 +1.3 3,189,029 - MPMX26_03066 0.30 +0.2 3,189,029 - MPMX26_03066 0.30 -0.2 3,189,029 - MPMX26_03066 0.30 -0.9 3,189,029 - MPMX26_03066 0.30 -0.0 3,189,029 - MPMX26_03066 0.30 +0.3 3,189,029 - MPMX26_03066 0.30 +0.3 3,189,029 - MPMX26_03066 0.30 -1.1 3,189,029 - MPMX26_03066 0.30 -0.0 3,189,029 - MPMX26_03066 0.30 +1.7 3,189,029 - MPMX26_03066 0.30 +0.0 3,189,029 - MPMX26_03066 0.30 -0.5 3,189,029 - MPMX26_03066 0.30 +0.7 3,189,038 - MPMX26_03066 0.31 +0.7 3,189,038 - MPMX26_03066 0.31 -2.3 3,189,040 - MPMX26_03066 0.31 -0.7 3,189,041 - MPMX26_03066 0.31 +0.1 3,189,046 - MPMX26_03066 0.32 -0.8 3,189,046 - MPMX26_03066 0.32 -0.8 3,189,046 - MPMX26_03066 0.32 -0.4 3,189,046 - MPMX26_03066 0.32 -0.6 3,189,046 - MPMX26_03066 0.32 -2.3 3,189,046 - MPMX26_03066 0.32 +0.5 3,189,046 - MPMX26_03066 0.32 -0.1 3,189,046 - MPMX26_03066 0.32 -0.8 3,189,079 - MPMX26_03066 0.37 -0.2 3,189,131 - MPMX26_03066 0.44 -0.3 3,189,196 - MPMX26_03066 0.53 +0.2 3,189,196 - MPMX26_03066 0.53 +0.7 3,189,196 - MPMX26_03066 0.53 -0.0 3,189,201 - MPMX26_03066 0.54 -0.5 3,189,201 - MPMX26_03066 0.54 -0.7 3,189,201 - MPMX26_03066 0.54 +0.1 3,189,201 - MPMX26_03066 0.54 +0.3 3,189,201 - MPMX26_03066 0.54 -0.7 3,189,201 - MPMX26_03066 0.54 +0.0 3,189,211 - MPMX26_03066 0.55 -0.5 3,189,211 - MPMX26_03066 0.55 -0.8 3,189,211 - MPMX26_03066 0.55 +0.4 3,189,211 - MPMX26_03066 0.55 -1.1 3,189,211 - MPMX26_03066 0.55 +1.9 3,189,211 - MPMX26_03066 0.55 +0.7 3,189,255 - MPMX26_03066 0.61 +0.0 3,189,288 - MPMX26_03066 0.66 -0.3 3,189,313 - MPMX26_03066 0.69 +0.6 3,189,323 - MPMX26_03066 0.71 -0.1 3,189,363 - MPMX26_03066 0.76 +0.1 3,189,363 - MPMX26_03066 0.76 +0.1 3,189,363 - MPMX26_03066 0.76 -0.2 3,189,363 - MPMX26_03066 0.76 +0.5 3,189,373 - MPMX26_03066 0.78 +0.1 3,189,373 - MPMX26_03066 0.78 +0.0 3,189,373 - MPMX26_03066 0.78 -1.5 3,189,373 - MPMX26_03066 0.78 -0.1 3,189,373 - MPMX26_03066 0.78 -0.9 3,189,373 - MPMX26_03066 0.78 -1.3 3,189,373 - MPMX26_03066 0.78 -0.2 3,189,390 - MPMX26_03066 0.80 +0.8 3,189,394 - MPMX26_03066 0.81 -1.5 3,189,400 - MPMX26_03066 0.82 -0.3 3,189,400 - MPMX26_03066 0.82 +0.3 3,189,427 - MPMX26_03066 0.85 -1.5 3,189,427 - MPMX26_03066 0.85 +0.2 3,189,427 - MPMX26_03066 0.85 -0.6 3,189,427 - MPMX26_03066 0.85 -0.6 3,189,427 - MPMX26_03066 0.85 -1.0 3,189,427 - MPMX26_03066 0.85 -1.0 3,189,427 - MPMX26_03066 0.85 -1.1 3,189,427 - MPMX26_03066 0.85 +0.1 3,189,437 - MPMX26_03066 0.87 +0.2 3,189,447 - MPMX26_03066 0.88 -0.1 3,189,447 - MPMX26_03066 0.88 -0.8 3,189,452 - MPMX26_03066 0.89 +0.7 3,189,457 - MPMX26_03066 0.89 -0.0 3,189,457 - MPMX26_03066 0.89 -0.4 3,189,459 - MPMX26_03066 0.90 -1.5 3,189,478 - +0.6 3,189,481 - -2.4 3,189,481 - +0.0 3,189,490 - -0.2 3,189,714 - +0.8 3,189,714 - -0.2 3,189,890 - MPMX26_03067 0.27 +0.0 3,189,920 - MPMX26_03067 0.30 -1.1 3,189,939 - MPMX26_03067 0.32 +1.0 3,190,148 - MPMX26_03067 0.53 +1.5 3,190,461 - MPMX26_03067 0.85 +0.6 3,190,514 - +0.3 3,190,522 - +0.8 3,190,522 - +0.7 3,190,546 + +1.5 3,190,554 - -1.1 3,190,701 + MPMX26_03068 0.18 -0.0 3,190,701 + MPMX26_03068 0.18 -1.0 3,190,713 + MPMX26_03068 0.22 -1.1 3,190,713 + MPMX26_03068 0.22 +0.1 3,190,713 + MPMX26_03068 0.22 -0.8 3,190,732 + MPMX26_03068 0.30 -1.1 3,190,765 + MPMX26_03068 0.42 -0.1 3,190,783 + MPMX26_03068 0.49 +0.6 3,190,821 + MPMX26_03068 0.63 -0.5 3,190,821 + MPMX26_03068 0.63 -1.6 3,190,821 + MPMX26_03068 0.63 +0.4 3,191,028 + +0.9 3,191,039 + -0.6 3,191,100 + -0.3 3,191,114 + +1.0 3,191,122 + -0.0 3,191,216 + MPMX26_03069 0.11 -0.2 3,191,226 + MPMX26_03069 0.12 -0.5 3,191,285 + MPMX26_03069 0.17 +0.1 3,191,390 + MPMX26_03069 0.26 +0.9 3,191,395 + MPMX26_03069 0.26 -0.6 3,191,395 + MPMX26_03069 0.26 +0.0 3,191,395 + MPMX26_03069 0.26 +1.2 3,191,395 + MPMX26_03069 0.26 +1.0 3,191,395 + MPMX26_03069 0.26 -1.8 3,191,395 + MPMX26_03069 0.26 -0.6 3,191,395 + MPMX26_03069 0.26 +0.6 3,191,459 + MPMX26_03069 0.32 +0.4 3,191,498 + MPMX26_03069 0.35 +0.5
Or see this region's nucleotide sequence