Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03056

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03055 and MPMX26_03056 are separated by 318 nucleotidesMPMX26_03056 and MPMX26_03057 are separated by 145 nucleotides MPMX26_03055: MPMX26_03055 - 3-methylmercaptopropionyl-CoA dehydrogenase, at 3,176,695 to 3,178,497 _03055 MPMX26_03056: MPMX26_03056 - hypothetical protein, at 3,178,816 to 3,180,189 _03056 MPMX26_03057: MPMX26_03057 - Sialic acid transporter NanT, at 3,180,335 to 3,181,612 _03057 Position (kb) 3178 3179 3180 3181Strain fitness (log2 ratio) -2 -1 0 1 2at 3177.863 kb on - strand, within MPMX26_03055at 3177.894 kb on - strand, within MPMX26_03055at 3177.894 kb on - strand, within MPMX26_03055at 3177.949 kb on - strand, within MPMX26_03055at 3177.961 kb on - strand, within MPMX26_03055at 3177.961 kb on - strand, within MPMX26_03055at 3177.972 kb on - strand, within MPMX26_03055at 3177.972 kb on - strand, within MPMX26_03055at 3177.972 kb on - strand, within MPMX26_03055at 3177.972 kb on - strand, within MPMX26_03055at 3177.983 kb on - strand, within MPMX26_03055at 3178.006 kb on + strand, within MPMX26_03055at 3178.014 kb on - strand, within MPMX26_03055at 3178.014 kb on - strand, within MPMX26_03055at 3178.018 kb on - strand, within MPMX26_03055at 3178.038 kb on + strand, within MPMX26_03055at 3178.038 kb on + strand, within MPMX26_03055at 3178.046 kb on - strand, within MPMX26_03055at 3178.046 kb on - strand, within MPMX26_03055at 3178.051 kb on - strand, within MPMX26_03055at 3178.051 kb on - strand, within MPMX26_03055at 3178.051 kb on - strand, within MPMX26_03055at 3178.051 kb on - strand, within MPMX26_03055at 3178.051 kb on - strand, within MPMX26_03055at 3178.070 kb on - strand, within MPMX26_03055at 3178.085 kb on - strand, within MPMX26_03055at 3178.085 kb on - strand, within MPMX26_03055at 3178.085 kb on - strand, within MPMX26_03055at 3178.095 kb on - strand, within MPMX26_03055at 3178.105 kb on - strand, within MPMX26_03055at 3178.105 kb on - strand, within MPMX26_03055at 3178.105 kb on - strand, within MPMX26_03055at 3178.114 kb on - strand, within MPMX26_03055at 3178.115 kb on - strand, within MPMX26_03055at 3178.115 kb on - strand, within MPMX26_03055at 3178.115 kb on - strand, within MPMX26_03055at 3178.115 kb on - strand, within MPMX26_03055at 3178.115 kb on - strand, within MPMX26_03055at 3178.120 kb on - strand, within MPMX26_03055at 3178.129 kb on - strand, within MPMX26_03055at 3178.133 kb on - strand, within MPMX26_03055at 3178.173 kb on + strand, within MPMX26_03055at 3178.173 kb on + strand, within MPMX26_03055at 3178.176 kb on - strand, within MPMX26_03055at 3178.181 kb on - strand, within MPMX26_03055at 3178.186 kb on - strand, within MPMX26_03055at 3178.194 kb on - strand, within MPMX26_03055at 3178.196 kb on - strand, within MPMX26_03055at 3178.196 kb on - strand, within MPMX26_03055at 3178.196 kb on - strand, within MPMX26_03055at 3178.198 kb on - strand, within MPMX26_03055at 3178.201 kb on - strand, within MPMX26_03055at 3178.203 kb on - strand, within MPMX26_03055at 3178.228 kb on - strand, within MPMX26_03055at 3178.228 kb on - strand, within MPMX26_03055at 3178.369 kb on - strandat 3178.547 kb on - strandat 3178.796 kb on - strandat 3178.804 kb on + strandat 3178.866 kb on - strandat 3178.887 kb on + strandat 3178.906 kb on + strandat 3178.914 kb on - strandat 3179.179 kb on - strand, within MPMX26_03056at 3179.180 kb on - strand, within MPMX26_03056at 3179.180 kb on - strand, within MPMX26_03056at 3179.182 kb on - strand, within MPMX26_03056at 3179.182 kb on - strand, within MPMX26_03056at 3179.249 kb on - strand, within MPMX26_03056at 3179.249 kb on - strand, within MPMX26_03056at 3179.265 kb on + strand, within MPMX26_03056at 3179.273 kb on - strand, within MPMX26_03056at 3179.487 kb on - strand, within MPMX26_03056at 3179.628 kb on - strand, within MPMX26_03056at 3179.769 kb on + strand, within MPMX26_03056at 3179.778 kb on - strand, within MPMX26_03056at 3179.795 kb on + strand, within MPMX26_03056at 3179.795 kb on + strand, within MPMX26_03056at 3179.804 kb on - strand, within MPMX26_03056at 3179.805 kb on + strand, within MPMX26_03056at 3179.840 kb on + strand, within MPMX26_03056at 3179.848 kb on - strand, within MPMX26_03056at 3179.848 kb on - strand, within MPMX26_03056at 3179.861 kb on - strand, within MPMX26_03056at 3179.889 kb on - strand, within MPMX26_03056at 3179.986 kb on - strand, within MPMX26_03056at 3179.986 kb on - strand, within MPMX26_03056at 3180.047 kb on - strand, within MPMX26_03056at 3180.118 kb on + strandat 3180.126 kb on - strandat 3180.146 kb on - strandat 3180.642 kb on + strand, within MPMX26_03057at 3180.650 kb on - strand, within MPMX26_03057at 3180.670 kb on - strand, within MPMX26_03057at 3180.768 kb on - strand, within MPMX26_03057at 3181.162 kb on - strand, within MPMX26_03057

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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3,177,863 - MPMX26_03055 0.65 +0.7
3,177,894 - MPMX26_03055 0.67 +1.0
3,177,894 - MPMX26_03055 0.67 +0.9
3,177,949 - MPMX26_03055 0.70 +0.1
3,177,961 - MPMX26_03055 0.70 +0.6
3,177,961 - MPMX26_03055 0.70 +0.8
3,177,972 - MPMX26_03055 0.71 +0.6
3,177,972 - MPMX26_03055 0.71 -0.2
3,177,972 - MPMX26_03055 0.71 -0.1
3,177,972 - MPMX26_03055 0.71 -0.4
3,177,983 - MPMX26_03055 0.71 +2.4
3,178,006 + MPMX26_03055 0.73 +1.6
3,178,014 - MPMX26_03055 0.73 -0.5
3,178,014 - MPMX26_03055 0.73 +0.2
3,178,018 - MPMX26_03055 0.73 -0.2
3,178,038 + MPMX26_03055 0.74 +0.2
3,178,038 + MPMX26_03055 0.74 +1.7
3,178,046 - MPMX26_03055 0.75 +1.2
3,178,046 - MPMX26_03055 0.75 +0.4
3,178,051 - MPMX26_03055 0.75 +1.2
3,178,051 - MPMX26_03055 0.75 +1.0
3,178,051 - MPMX26_03055 0.75 -0.9
3,178,051 - MPMX26_03055 0.75 -0.9
3,178,051 - MPMX26_03055 0.75 +1.0
3,178,070 - MPMX26_03055 0.76 +0.3
3,178,085 - MPMX26_03055 0.77 -1.5
3,178,085 - MPMX26_03055 0.77 +0.7
3,178,085 - MPMX26_03055 0.77 +0.2
3,178,095 - MPMX26_03055 0.78 -0.0
3,178,105 - MPMX26_03055 0.78 +0.3
3,178,105 - MPMX26_03055 0.78 +0.5
3,178,105 - MPMX26_03055 0.78 +0.3
3,178,114 - MPMX26_03055 0.79 -1.0
3,178,115 - MPMX26_03055 0.79 +0.5
3,178,115 - MPMX26_03055 0.79 +0.9
3,178,115 - MPMX26_03055 0.79 -2.0
3,178,115 - MPMX26_03055 0.79 +1.1
3,178,115 - MPMX26_03055 0.79 +0.2
3,178,120 - MPMX26_03055 0.79 -0.4
3,178,129 - MPMX26_03055 0.80 -0.6
3,178,133 - MPMX26_03055 0.80 -0.1
3,178,173 + MPMX26_03055 0.82 -0.1
3,178,173 + MPMX26_03055 0.82 +2.1
3,178,176 - MPMX26_03055 0.82 +0.2
3,178,181 - MPMX26_03055 0.82 +1.2
3,178,186 - MPMX26_03055 0.83 -0.1
3,178,194 - MPMX26_03055 0.83 -0.5
3,178,196 - MPMX26_03055 0.83 +0.7
3,178,196 - MPMX26_03055 0.83 +1.0
3,178,196 - MPMX26_03055 0.83 +1.0
3,178,198 - MPMX26_03055 0.83 +0.3
3,178,201 - MPMX26_03055 0.84 -0.3
3,178,203 - MPMX26_03055 0.84 +0.4
3,178,228 - MPMX26_03055 0.85 -0.0
3,178,228 - MPMX26_03055 0.85 +0.0
3,178,369 - +2.1
3,178,547 - +0.6
3,178,796 - +1.0
3,178,804 + +0.2
3,178,866 - -1.9
3,178,887 + +0.4
3,178,906 + +0.5
3,178,914 - -0.3
3,179,179 - MPMX26_03056 0.26 +0.7
3,179,180 - MPMX26_03056 0.26 +1.5
3,179,180 - MPMX26_03056 0.26 +0.8
3,179,182 - MPMX26_03056 0.27 +0.7
3,179,182 - MPMX26_03056 0.27 +1.3
3,179,249 - MPMX26_03056 0.32 -0.1
3,179,249 - MPMX26_03056 0.32 -0.0
3,179,265 + MPMX26_03056 0.33 +0.7
3,179,273 - MPMX26_03056 0.33 -0.6
3,179,487 - MPMX26_03056 0.49 -0.4
3,179,628 - MPMX26_03056 0.59 +0.3
3,179,769 + MPMX26_03056 0.69 +0.7
3,179,778 - MPMX26_03056 0.70 -0.3
3,179,795 + MPMX26_03056 0.71 +0.7
3,179,795 + MPMX26_03056 0.71 -0.1
3,179,804 - MPMX26_03056 0.72 +2.2
3,179,805 + MPMX26_03056 0.72 +2.0
3,179,840 + MPMX26_03056 0.75 +1.2
3,179,848 - MPMX26_03056 0.75 +1.7
3,179,848 - MPMX26_03056 0.75 -0.5
3,179,861 - MPMX26_03056 0.76 +0.3
3,179,889 - MPMX26_03056 0.78 -0.4
3,179,986 - MPMX26_03056 0.85 +0.5
3,179,986 - MPMX26_03056 0.85 +2.3
3,180,047 - MPMX26_03056 0.90 -0.5
3,180,118 + +0.9
3,180,126 - +0.5
3,180,146 - +2.2
3,180,642 + MPMX26_03057 0.24 +0.3
3,180,650 - MPMX26_03057 0.25 -0.2
3,180,670 - MPMX26_03057 0.26 +1.6
3,180,768 - MPMX26_03057 0.34 -0.6
3,181,162 - MPMX26_03057 0.65 -1.0

Or see this region's nucleotide sequence