Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02980

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02979 and MPMX26_02980 are separated by 118 nucleotidesMPMX26_02980 and MPMX26_02981 are separated by 145 nucleotides MPMX26_02979: MPMX26_02979 - Pantothenate precursors transporter PanS, at 3,095,831 to 3,096,793 _02979 MPMX26_02980: MPMX26_02980 - Nicotinamidase, at 3,096,912 to 3,097,556 _02980 MPMX26_02981: MPMX26_02981 - 3-(3-hydroxy-phenyl)propionate transporter, at 3,097,702 to 3,098,904 _02981 Position (kb) 3096 3097 3098Strain fitness (log2 ratio) -2 -1 0 1 2at 3095.928 kb on - strand, within MPMX26_02979at 3095.951 kb on - strand, within MPMX26_02979at 3095.988 kb on - strand, within MPMX26_02979at 3095.995 kb on - strand, within MPMX26_02979at 3095.995 kb on - strand, within MPMX26_02979at 3095.995 kb on - strand, within MPMX26_02979at 3096.035 kb on - strand, within MPMX26_02979at 3096.035 kb on - strand, within MPMX26_02979at 3096.035 kb on - strand, within MPMX26_02979at 3096.035 kb on - strand, within MPMX26_02979at 3096.035 kb on - strand, within MPMX26_02979at 3096.035 kb on - strand, within MPMX26_02979at 3096.101 kb on - strand, within MPMX26_02979at 3096.101 kb on - strand, within MPMX26_02979at 3096.101 kb on - strand, within MPMX26_02979at 3096.101 kb on - strand, within MPMX26_02979at 3096.101 kb on - strand, within MPMX26_02979at 3096.101 kb on - strand, within MPMX26_02979at 3096.101 kb on - strand, within MPMX26_02979at 3096.101 kb on - strand, within MPMX26_02979at 3096.101 kb on - strand, within MPMX26_02979at 3096.101 kb on - strand, within MPMX26_02979at 3096.149 kb on - strand, within MPMX26_02979at 3096.149 kb on - strand, within MPMX26_02979at 3096.187 kb on - strand, within MPMX26_02979at 3096.187 kb on - strand, within MPMX26_02979at 3096.203 kb on - strand, within MPMX26_02979at 3096.215 kb on - strand, within MPMX26_02979at 3096.215 kb on - strand, within MPMX26_02979at 3096.220 kb on - strand, within MPMX26_02979at 3096.220 kb on - strand, within MPMX26_02979at 3096.222 kb on - strand, within MPMX26_02979at 3096.224 kb on - strand, within MPMX26_02979at 3096.227 kb on - strand, within MPMX26_02979at 3096.234 kb on - strand, within MPMX26_02979at 3096.264 kb on - strand, within MPMX26_02979at 3096.281 kb on - strand, within MPMX26_02979at 3096.290 kb on - strand, within MPMX26_02979at 3096.305 kb on - strand, within MPMX26_02979at 3096.349 kb on - strand, within MPMX26_02979at 3096.349 kb on - strand, within MPMX26_02979at 3096.388 kb on - strand, within MPMX26_02979at 3096.394 kb on - strand, within MPMX26_02979at 3096.407 kb on - strand, within MPMX26_02979at 3096.413 kb on - strand, within MPMX26_02979at 3096.428 kb on - strand, within MPMX26_02979at 3096.428 kb on - strand, within MPMX26_02979at 3096.428 kb on - strand, within MPMX26_02979at 3096.433 kb on - strand, within MPMX26_02979at 3096.482 kb on - strand, within MPMX26_02979at 3096.482 kb on - strand, within MPMX26_02979at 3096.563 kb on - strand, within MPMX26_02979at 3096.563 kb on - strand, within MPMX26_02979at 3096.640 kb on - strand, within MPMX26_02979at 3096.640 kb on - strand, within MPMX26_02979at 3096.640 kb on - strand, within MPMX26_02979at 3096.641 kb on - strand, within MPMX26_02979at 3096.658 kb on - strand, within MPMX26_02979at 3096.683 kb on - strand, within MPMX26_02979at 3096.689 kb on - strand, within MPMX26_02979at 3096.689 kb on - strand, within MPMX26_02979at 3096.690 kb on - strand, within MPMX26_02979at 3096.707 kb on - strandat 3096.739 kb on - strandat 3096.787 kb on - strandat 3096.787 kb on - strandat 3096.803 kb on - strandat 3096.814 kb on - strandat 3096.868 kb on - strandat 3096.875 kb on + strandat 3096.883 kb on - strandat 3096.883 kb on - strandat 3096.901 kb on - strandat 3096.915 kb on - strandat 3096.918 kb on - strandat 3096.960 kb on + strandat 3096.975 kb on - strandat 3096.975 kb on - strandat 3096.975 kb on - strandat 3096.975 kb on - strandat 3096.975 kb on - strandat 3096.975 kb on - strandat 3096.975 kb on - strandat 3096.975 kb on - strandat 3097.081 kb on + strand, within MPMX26_02980at 3097.089 kb on - strand, within MPMX26_02980at 3097.089 kb on - strand, within MPMX26_02980at 3097.098 kb on - strand, within MPMX26_02980at 3097.098 kb on - strand, within MPMX26_02980at 3097.098 kb on - strand, within MPMX26_02980at 3097.098 kb on - strand, within MPMX26_02980at 3097.098 kb on - strand, within MPMX26_02980at 3097.098 kb on - strand, within MPMX26_02980at 3097.124 kb on - strand, within MPMX26_02980at 3097.171 kb on - strand, within MPMX26_02980at 3097.181 kb on - strand, within MPMX26_02980at 3097.291 kb on - strand, within MPMX26_02980at 3097.291 kb on - strand, within MPMX26_02980at 3097.291 kb on - strand, within MPMX26_02980at 3097.291 kb on - strand, within MPMX26_02980at 3097.298 kb on - strand, within MPMX26_02980at 3097.300 kb on - strand, within MPMX26_02980at 3097.312 kb on - strand, within MPMX26_02980at 3097.312 kb on - strand, within MPMX26_02980at 3097.322 kb on - strand, within MPMX26_02980at 3097.322 kb on - strand, within MPMX26_02980at 3097.322 kb on - strand, within MPMX26_02980at 3097.322 kb on - strand, within MPMX26_02980at 3097.324 kb on - strand, within MPMX26_02980at 3097.324 kb on - strand, within MPMX26_02980at 3097.345 kb on - strand, within MPMX26_02980at 3097.345 kb on - strand, within MPMX26_02980at 3097.345 kb on - strand, within MPMX26_02980at 3097.355 kb on - strand, within MPMX26_02980at 3097.426 kb on - strand, within MPMX26_02980at 3097.472 kb on - strand, within MPMX26_02980at 3097.477 kb on - strand, within MPMX26_02980at 3097.560 kb on - strandat 3097.574 kb on - strandat 3097.574 kb on - strandat 3097.574 kb on - strandat 3097.718 kb on - strandat 3097.773 kb on - strandat 3097.791 kb on - strandat 3097.816 kb on - strandat 3097.821 kb on - strandat 3097.847 kb on - strand, within MPMX26_02981at 3097.852 kb on - strand, within MPMX26_02981at 3097.852 kb on - strand, within MPMX26_02981at 3097.852 kb on - strand, within MPMX26_02981at 3097.852 kb on - strand, within MPMX26_02981at 3097.852 kb on - strand, within MPMX26_02981at 3097.852 kb on - strand, within MPMX26_02981at 3097.852 kb on - strand, within MPMX26_02981at 3097.852 kb on - strand, within MPMX26_02981at 3097.852 kb on - strand, within MPMX26_02981at 3097.863 kb on - strand, within MPMX26_02981at 3097.863 kb on - strand, within MPMX26_02981at 3097.863 kb on - strand, within MPMX26_02981at 3097.863 kb on - strand, within MPMX26_02981at 3097.876 kb on - strand, within MPMX26_02981at 3097.893 kb on - strand, within MPMX26_02981at 3097.913 kb on - strand, within MPMX26_02981at 3097.935 kb on - strand, within MPMX26_02981at 3097.976 kb on - strand, within MPMX26_02981at 3097.981 kb on - strand, within MPMX26_02981at 3097.981 kb on - strand, within MPMX26_02981at 3097.989 kb on - strand, within MPMX26_02981at 3098.053 kb on - strand, within MPMX26_02981at 3098.057 kb on - strand, within MPMX26_02981at 3098.057 kb on - strand, within MPMX26_02981at 3098.057 kb on - strand, within MPMX26_02981at 3098.123 kb on + strand, within MPMX26_02981at 3098.128 kb on + strand, within MPMX26_02981at 3098.131 kb on - strand, within MPMX26_02981at 3098.131 kb on - strand, within MPMX26_02981at 3098.141 kb on - strand, within MPMX26_02981at 3098.141 kb on - strand, within MPMX26_02981at 3098.146 kb on - strand, within MPMX26_02981at 3098.176 kb on - strand, within MPMX26_02981at 3098.211 kb on - strand, within MPMX26_02981at 3098.277 kb on - strand, within MPMX26_02981at 3098.423 kb on + strand, within MPMX26_02981at 3098.431 kb on - strand, within MPMX26_02981at 3098.444 kb on + strand, within MPMX26_02981at 3098.477 kb on + strand, within MPMX26_02981at 3098.485 kb on - strand, within MPMX26_02981at 3098.493 kb on - strand, within MPMX26_02981at 3098.511 kb on + strand, within MPMX26_02981at 3098.511 kb on + strand, within MPMX26_02981at 3098.511 kb on + strand, within MPMX26_02981at 3098.519 kb on - strand, within MPMX26_02981at 3098.519 kb on - strand, within MPMX26_02981at 3098.519 kb on - strand, within MPMX26_02981at 3098.519 kb on - strand, within MPMX26_02981at 3098.546 kb on - strand, within MPMX26_02981

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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3,095,928 - MPMX26_02979 0.10 +0.6
3,095,951 - MPMX26_02979 0.12 +0.2
3,095,988 - MPMX26_02979 0.16 +0.6
3,095,995 - MPMX26_02979 0.17 +0.5
3,095,995 - MPMX26_02979 0.17 +0.3
3,095,995 - MPMX26_02979 0.17 -0.8
3,096,035 - MPMX26_02979 0.21 -0.2
3,096,035 - MPMX26_02979 0.21 -0.5
3,096,035 - MPMX26_02979 0.21 -0.6
3,096,035 - MPMX26_02979 0.21 +1.9
3,096,035 - MPMX26_02979 0.21 +1.7
3,096,035 - MPMX26_02979 0.21 -1.1
3,096,101 - MPMX26_02979 0.28 +0.1
3,096,101 - MPMX26_02979 0.28 -0.6
3,096,101 - MPMX26_02979 0.28 -0.2
3,096,101 - MPMX26_02979 0.28 +1.5
3,096,101 - MPMX26_02979 0.28 -0.4
3,096,101 - MPMX26_02979 0.28 +1.2
3,096,101 - MPMX26_02979 0.28 +1.2
3,096,101 - MPMX26_02979 0.28 -0.8
3,096,101 - MPMX26_02979 0.28 +1.8
3,096,101 - MPMX26_02979 0.28 +0.3
3,096,149 - MPMX26_02979 0.33 -0.1
3,096,149 - MPMX26_02979 0.33 -0.9
3,096,187 - MPMX26_02979 0.37 -0.4
3,096,187 - MPMX26_02979 0.37 -1.0
3,096,203 - MPMX26_02979 0.39 -1.1
3,096,215 - MPMX26_02979 0.40 -0.3
3,096,215 - MPMX26_02979 0.40 +1.0
3,096,220 - MPMX26_02979 0.40 +0.8
3,096,220 - MPMX26_02979 0.40 -0.6
3,096,222 - MPMX26_02979 0.41 -0.4
3,096,224 - MPMX26_02979 0.41 +1.2
3,096,227 - MPMX26_02979 0.41 +0.9
3,096,234 - MPMX26_02979 0.42 -0.4
3,096,264 - MPMX26_02979 0.45 -0.9
3,096,281 - MPMX26_02979 0.47 +2.5
3,096,290 - MPMX26_02979 0.48 +0.4
3,096,305 - MPMX26_02979 0.49 -0.5
3,096,349 - MPMX26_02979 0.54 -1.1
3,096,349 - MPMX26_02979 0.54 -0.4
3,096,388 - MPMX26_02979 0.58 -0.2
3,096,394 - MPMX26_02979 0.58 +0.4
3,096,407 - MPMX26_02979 0.60 -0.6
3,096,413 - MPMX26_02979 0.60 -0.5
3,096,428 - MPMX26_02979 0.62 -0.4
3,096,428 - MPMX26_02979 0.62 -0.5
3,096,428 - MPMX26_02979 0.62 -1.3
3,096,433 - MPMX26_02979 0.63 +0.1
3,096,482 - MPMX26_02979 0.68 -0.2
3,096,482 - MPMX26_02979 0.68 -1.7
3,096,563 - MPMX26_02979 0.76 -0.1
3,096,563 - MPMX26_02979 0.76 -1.0
3,096,640 - MPMX26_02979 0.84 -0.7
3,096,640 - MPMX26_02979 0.84 -0.3
3,096,640 - MPMX26_02979 0.84 -0.2
3,096,641 - MPMX26_02979 0.84 +0.1
3,096,658 - MPMX26_02979 0.86 -0.3
3,096,683 - MPMX26_02979 0.88 -0.5
3,096,689 - MPMX26_02979 0.89 -0.7
3,096,689 - MPMX26_02979 0.89 -0.3
3,096,690 - MPMX26_02979 0.89 -0.4
3,096,707 - +0.9
3,096,739 - -0.0
3,096,787 - +1.7
3,096,787 - -0.2
3,096,803 - +1.2
3,096,814 - -1.3
3,096,868 - -0.1
3,096,875 + +1.5
3,096,883 - -0.9
3,096,883 - -0.2
3,096,901 - +0.1
3,096,915 - -0.0
3,096,918 - +1.3
3,096,960 + -1.5
3,096,975 - +0.2
3,096,975 - -2.1
3,096,975 - -0.2
3,096,975 - +0.2
3,096,975 - +1.0
3,096,975 - -0.5
3,096,975 - +0.7
3,096,975 - -0.3
3,097,081 + MPMX26_02980 0.26 +0.7
3,097,089 - MPMX26_02980 0.27 +0.8
3,097,089 - MPMX26_02980 0.27 +0.2
3,097,098 - MPMX26_02980 0.29 -0.4
3,097,098 - MPMX26_02980 0.29 +0.0
3,097,098 - MPMX26_02980 0.29 +0.7
3,097,098 - MPMX26_02980 0.29 -1.4
3,097,098 - MPMX26_02980 0.29 -0.6
3,097,098 - MPMX26_02980 0.29 +0.1
3,097,124 - MPMX26_02980 0.33 +0.8
3,097,171 - MPMX26_02980 0.40 -0.8
3,097,181 - MPMX26_02980 0.42 -0.3
3,097,291 - MPMX26_02980 0.59 +0.7
3,097,291 - MPMX26_02980 0.59 -1.3
3,097,291 - MPMX26_02980 0.59 +0.5
3,097,291 - MPMX26_02980 0.59 -0.4
3,097,298 - MPMX26_02980 0.60 -0.7
3,097,300 - MPMX26_02980 0.60 -2.6
3,097,312 - MPMX26_02980 0.62 +0.1
3,097,312 - MPMX26_02980 0.62 +1.2
3,097,322 - MPMX26_02980 0.64 +0.1
3,097,322 - MPMX26_02980 0.64 -0.5
3,097,322 - MPMX26_02980 0.64 +0.5
3,097,322 - MPMX26_02980 0.64 -1.4
3,097,324 - MPMX26_02980 0.64 +0.3
3,097,324 - MPMX26_02980 0.64 +0.8
3,097,345 - MPMX26_02980 0.67 -0.4
3,097,345 - MPMX26_02980 0.67 +0.0
3,097,345 - MPMX26_02980 0.67 -0.5
3,097,355 - MPMX26_02980 0.69 +0.3
3,097,426 - MPMX26_02980 0.80 +1.1
3,097,472 - MPMX26_02980 0.87 -0.3
3,097,477 - MPMX26_02980 0.88 -0.1
3,097,560 - -0.3
3,097,574 - +2.5
3,097,574 - +1.2
3,097,574 - +1.5
3,097,718 - +0.9
3,097,773 - +1.4
3,097,791 - -0.5
3,097,816 - +1.1
3,097,821 - +1.3
3,097,847 - MPMX26_02981 0.12 -1.8
3,097,852 - MPMX26_02981 0.12 +0.7
3,097,852 - MPMX26_02981 0.12 -1.1
3,097,852 - MPMX26_02981 0.12 -0.0
3,097,852 - MPMX26_02981 0.12 -0.4
3,097,852 - MPMX26_02981 0.12 -0.0
3,097,852 - MPMX26_02981 0.12 -0.0
3,097,852 - MPMX26_02981 0.12 -0.2
3,097,852 - MPMX26_02981 0.12 +0.0
3,097,852 - MPMX26_02981 0.12 -2.3
3,097,863 - MPMX26_02981 0.13 +0.7
3,097,863 - MPMX26_02981 0.13 +0.0
3,097,863 - MPMX26_02981 0.13 -0.8
3,097,863 - MPMX26_02981 0.13 -0.1
3,097,876 - MPMX26_02981 0.14 +0.8
3,097,893 - MPMX26_02981 0.16 -0.2
3,097,913 - MPMX26_02981 0.18 +0.6
3,097,935 - MPMX26_02981 0.19 +0.0
3,097,976 - MPMX26_02981 0.23 +0.8
3,097,981 - MPMX26_02981 0.23 -0.2
3,097,981 - MPMX26_02981 0.23 -1.6
3,097,989 - MPMX26_02981 0.24 -0.6
3,098,053 - MPMX26_02981 0.29 -0.0
3,098,057 - MPMX26_02981 0.30 +0.0
3,098,057 - MPMX26_02981 0.30 -2.1
3,098,057 - MPMX26_02981 0.30 -0.3
3,098,123 + MPMX26_02981 0.35 -1.9
3,098,128 + MPMX26_02981 0.35 +0.6
3,098,131 - MPMX26_02981 0.36 +0.6
3,098,131 - MPMX26_02981 0.36 -0.5
3,098,141 - MPMX26_02981 0.36 +0.5
3,098,141 - MPMX26_02981 0.36 -0.9
3,098,146 - MPMX26_02981 0.37 +0.3
3,098,176 - MPMX26_02981 0.39 +1.5
3,098,211 - MPMX26_02981 0.42 -1.0
3,098,277 - MPMX26_02981 0.48 -0.9
3,098,423 + MPMX26_02981 0.60 +1.5
3,098,431 - MPMX26_02981 0.61 -0.4
3,098,444 + MPMX26_02981 0.62 +0.3
3,098,477 + MPMX26_02981 0.64 -0.1
3,098,485 - MPMX26_02981 0.65 +0.9
3,098,493 - MPMX26_02981 0.66 +0.4
3,098,511 + MPMX26_02981 0.67 +1.7
3,098,511 + MPMX26_02981 0.67 +0.2
3,098,511 + MPMX26_02981 0.67 -0.2
3,098,519 - MPMX26_02981 0.68 -1.0
3,098,519 - MPMX26_02981 0.68 +0.9
3,098,519 - MPMX26_02981 0.68 +0.3
3,098,519 - MPMX26_02981 0.68 +1.0
3,098,546 - MPMX26_02981 0.70 -1.1

Or see this region's nucleotide sequence