Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02809

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02808 and MPMX26_02809 are separated by 462 nucleotidesMPMX26_02809 and MPMX26_02810 are separated by 7 nucleotides MPMX26_02808: MPMX26_02808 - Glutamate synthase [NADPH] large chain, at 2,890,676 to 2,895,151 _02808 MPMX26_02809: MPMX26_02809 - hypothetical protein, at 2,895,614 to 2,896,477 _02809 MPMX26_02810: MPMX26_02810 - 3-dehydroquinate synthase, at 2,896,485 to 2,897,570 _02810 Position (kb) 2895 2896 2897Strain fitness (log2 ratio) -1 0 1 2at 2894.625 kb on - strand, within MPMX26_02808at 2894.630 kb on - strand, within MPMX26_02808at 2894.713 kb on - strandat 2894.785 kb on - strandat 2894.798 kb on - strandat 2894.834 kb on + strandat 2894.842 kb on - strandat 2894.969 kb on - strandat 2895.050 kb on - strandat 2895.050 kb on - strandat 2895.050 kb on - strandat 2895.050 kb on - strandat 2895.137 kb on - strandat 2895.380 kb on - strandat 2895.575 kb on - strandat 2895.595 kb on - strandat 2895.595 kb on - strandat 2895.595 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.656 kb on - strandat 2895.657 kb on - strandat 2895.657 kb on - strandat 2895.686 kb on - strandat 2895.724 kb on - strand, within MPMX26_02809at 2895.737 kb on - strand, within MPMX26_02809at 2895.737 kb on - strand, within MPMX26_02809at 2895.737 kb on - strand, within MPMX26_02809at 2895.737 kb on - strand, within MPMX26_02809at 2895.737 kb on - strand, within MPMX26_02809at 2895.737 kb on - strand, within MPMX26_02809at 2895.737 kb on - strand, within MPMX26_02809at 2895.745 kb on - strand, within MPMX26_02809at 2895.745 kb on - strand, within MPMX26_02809at 2895.796 kb on - strand, within MPMX26_02809at 2895.801 kb on - strand, within MPMX26_02809at 2895.801 kb on - strand, within MPMX26_02809at 2895.805 kb on - strand, within MPMX26_02809at 2895.806 kb on - strand, within MPMX26_02809at 2895.889 kb on - strand, within MPMX26_02809at 2895.904 kb on - strand, within MPMX26_02809at 2895.959 kb on - strand, within MPMX26_02809at 2895.965 kb on - strand, within MPMX26_02809at 2895.977 kb on - strand, within MPMX26_02809at 2896.009 kb on - strand, within MPMX26_02809at 2896.018 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.028 kb on - strand, within MPMX26_02809at 2896.040 kb on - strand, within MPMX26_02809at 2896.045 kb on - strand, within MPMX26_02809at 2896.054 kb on - strand, within MPMX26_02809at 2896.054 kb on - strand, within MPMX26_02809at 2896.054 kb on - strand, within MPMX26_02809at 2896.059 kb on - strand, within MPMX26_02809at 2896.059 kb on - strand, within MPMX26_02809at 2896.059 kb on - strand, within MPMX26_02809at 2896.071 kb on - strand, within MPMX26_02809at 2896.208 kb on - strand, within MPMX26_02809at 2896.232 kb on - strand, within MPMX26_02809at 2896.242 kb on - strand, within MPMX26_02809at 2896.266 kb on - strand, within MPMX26_02809at 2896.319 kb on - strand, within MPMX26_02809at 2896.385 kb on - strand, within MPMX26_02809at 2896.410 kb on - strandat 2896.415 kb on - strandat 2896.415 kb on - strandat 2896.454 kb on - strandat 2896.481 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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2,894,625 - MPMX26_02808 0.88 +1.9
2,894,630 - MPMX26_02808 0.88 +1.6
2,894,713 - +0.5
2,894,785 - +0.2
2,894,798 - +0.9
2,894,834 + +1.5
2,894,842 - +1.5
2,894,969 - -0.9
2,895,050 - -0.8
2,895,050 - +1.1
2,895,050 - +0.4
2,895,050 - -0.0
2,895,137 - +0.2
2,895,380 - +1.1
2,895,575 - +1.6
2,895,595 - -0.3
2,895,595 - +0.4
2,895,595 - +0.7
2,895,656 - +0.2
2,895,656 - +0.1
2,895,656 - +0.2
2,895,656 - -0.2
2,895,656 - -0.2
2,895,656 - +0.1
2,895,656 - -0.7
2,895,656 - -0.9
2,895,656 - -0.6
2,895,656 - +0.3
2,895,656 - +0.3
2,895,656 - -0.5
2,895,656 - -0.1
2,895,656 - -0.4
2,895,656 - -0.7
2,895,657 - +0.3
2,895,657 - +0.3
2,895,686 - -0.1
2,895,724 - MPMX26_02809 0.13 +0.1
2,895,737 - MPMX26_02809 0.14 -0.0
2,895,737 - MPMX26_02809 0.14 -0.1
2,895,737 - MPMX26_02809 0.14 -0.6
2,895,737 - MPMX26_02809 0.14 +0.1
2,895,737 - MPMX26_02809 0.14 -0.5
2,895,737 - MPMX26_02809 0.14 +0.9
2,895,737 - MPMX26_02809 0.14 -0.9
2,895,745 - MPMX26_02809 0.15 +0.3
2,895,745 - MPMX26_02809 0.15 +0.4
2,895,796 - MPMX26_02809 0.21 +1.7
2,895,801 - MPMX26_02809 0.22 -0.1
2,895,801 - MPMX26_02809 0.22 -0.3
2,895,805 - MPMX26_02809 0.22 +0.6
2,895,806 - MPMX26_02809 0.22 +0.2
2,895,889 - MPMX26_02809 0.32 +0.5
2,895,904 - MPMX26_02809 0.34 +0.4
2,895,959 - MPMX26_02809 0.40 +0.4
2,895,965 - MPMX26_02809 0.41 +0.7
2,895,977 - MPMX26_02809 0.42 +0.9
2,896,009 - MPMX26_02809 0.46 +0.6
2,896,018 - MPMX26_02809 0.47 +2.5
2,896,028 - MPMX26_02809 0.48 +0.3
2,896,028 - MPMX26_02809 0.48 +1.0
2,896,028 - MPMX26_02809 0.48 -0.7
2,896,028 - MPMX26_02809 0.48 +0.6
2,896,028 - MPMX26_02809 0.48 +0.3
2,896,028 - MPMX26_02809 0.48 +0.2
2,896,028 - MPMX26_02809 0.48 -0.2
2,896,028 - MPMX26_02809 0.48 +0.0
2,896,028 - MPMX26_02809 0.48 +0.4
2,896,028 - MPMX26_02809 0.48 +0.3
2,896,028 - MPMX26_02809 0.48 +0.5
2,896,028 - MPMX26_02809 0.48 +0.8
2,896,028 - MPMX26_02809 0.48 +0.5
2,896,028 - MPMX26_02809 0.48 +0.2
2,896,028 - MPMX26_02809 0.48 +0.3
2,896,028 - MPMX26_02809 0.48 +1.2
2,896,028 - MPMX26_02809 0.48 +1.2
2,896,028 - MPMX26_02809 0.48 +0.5
2,896,028 - MPMX26_02809 0.48 +0.1
2,896,028 - MPMX26_02809 0.48 +0.0
2,896,028 - MPMX26_02809 0.48 +0.6
2,896,028 - MPMX26_02809 0.48 +0.1
2,896,028 - MPMX26_02809 0.48 +0.3
2,896,028 - MPMX26_02809 0.48 +1.0
2,896,028 - MPMX26_02809 0.48 +0.8
2,896,028 - MPMX26_02809 0.48 -1.2
2,896,028 - MPMX26_02809 0.48 +0.6
2,896,028 - MPMX26_02809 0.48 +0.4
2,896,028 - MPMX26_02809 0.48 +0.5
2,896,040 - MPMX26_02809 0.49 +0.1
2,896,045 - MPMX26_02809 0.50 +1.2
2,896,054 - MPMX26_02809 0.51 +0.6
2,896,054 - MPMX26_02809 0.51 +1.4
2,896,054 - MPMX26_02809 0.51 -0.2
2,896,059 - MPMX26_02809 0.52 +0.5
2,896,059 - MPMX26_02809 0.52 -0.7
2,896,059 - MPMX26_02809 0.52 -0.1
2,896,071 - MPMX26_02809 0.53 -0.1
2,896,208 - MPMX26_02809 0.69 +0.3
2,896,232 - MPMX26_02809 0.72 +0.9
2,896,242 - MPMX26_02809 0.73 +0.7
2,896,266 - MPMX26_02809 0.75 +0.3
2,896,319 - MPMX26_02809 0.82 +0.2
2,896,385 - MPMX26_02809 0.89 +0.5
2,896,410 - -0.0
2,896,415 - +0.4
2,896,415 - -0.0
2,896,454 - +0.1
2,896,481 - +0.2

Or see this region's nucleotide sequence