Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02644

Experiment: L-Proline (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02642 and MPMX26_02643 are separated by 77 nucleotidesMPMX26_02643 and MPMX26_02644 are separated by 91 nucleotidesMPMX26_02644 and MPMX26_02645 are separated by 27 nucleotidesMPMX26_02645 and MPMX26_02646 are separated by 42 nucleotidesMPMX26_02646 and MPMX26_02647 are separated by 1 nucleotides MPMX26_02642: MPMX26_02642 - tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC, at 2,736,222 to 2,738,129 _02642 MPMX26_02643: MPMX26_02643 - hypothetical protein, at 2,738,207 to 2,738,521 _02643 MPMX26_02644: MPMX26_02644 - hypothetical protein, at 2,738,613 to 2,739,101 _02644 MPMX26_02645: MPMX26_02645 - hypothetical protein, at 2,739,129 to 2,739,632 _02645 MPMX26_02646: MPMX26_02646 - putative acyl-CoA thioester hydrolase, at 2,739,675 to 2,740,097 _02646 MPMX26_02647: MPMX26_02647 - Thioredoxin 2, at 2,740,099 to 2,740,530 _02647 Position (kb) 2738 2739 2740Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2737.656 kb on + strand, within MPMX26_02642at 2737.667 kb on + strand, within MPMX26_02642at 2737.667 kb on + strand, within MPMX26_02642at 2737.686 kb on + strand, within MPMX26_02642at 2737.686 kb on + strand, within MPMX26_02642at 2737.686 kb on + strand, within MPMX26_02642at 2737.686 kb on + strand, within MPMX26_02642at 2737.766 kb on + strand, within MPMX26_02642at 2737.766 kb on + strand, within MPMX26_02642at 2737.766 kb on + strand, within MPMX26_02642at 2737.766 kb on + strand, within MPMX26_02642at 2737.814 kb on + strand, within MPMX26_02642at 2737.814 kb on + strand, within MPMX26_02642at 2737.861 kb on + strand, within MPMX26_02642at 2737.878 kb on + strand, within MPMX26_02642at 2737.886 kb on + strand, within MPMX26_02642at 2737.887 kb on + strand, within MPMX26_02642at 2738.004 kb on + strandat 2738.004 kb on + strandat 2738.004 kb on + strandat 2738.004 kb on + strandat 2738.004 kb on + strandat 2738.004 kb on + strandat 2738.004 kb on + strandat 2738.004 kb on + strandat 2738.004 kb on + strandat 2738.004 kb on + strandat 2738.004 kb on + strandat 2738.006 kb on + strandat 2738.045 kb on + strandat 2738.050 kb on + strandat 2738.050 kb on + strandat 2738.050 kb on + strandat 2738.050 kb on + strandat 2738.050 kb on + strandat 2738.050 kb on + strandat 2738.050 kb on + strandat 2738.050 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.055 kb on + strandat 2738.060 kb on + strandat 2738.060 kb on + strandat 2738.060 kb on + strandat 2738.060 kb on + strandat 2738.060 kb on + strandat 2738.060 kb on + strandat 2738.060 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.065 kb on + strandat 2738.070 kb on + strandat 2738.070 kb on + strandat 2738.070 kb on + strandat 2738.070 kb on + strandat 2738.078 kb on + strandat 2738.142 kb on + strandat 2738.142 kb on + strandat 2738.142 kb on + strandat 2738.147 kb on + strandat 2738.152 kb on + strandat 2738.157 kb on + strandat 2738.157 kb on + strandat 2738.157 kb on + strandat 2738.157 kb on + strandat 2738.157 kb on + strandat 2738.157 kb on + strandat 2738.198 kb on - strandat 2738.238 kb on - strandat 2738.255 kb on - strand, within MPMX26_02643at 2738.255 kb on - strand, within MPMX26_02643at 2738.269 kb on - strand, within MPMX26_02643at 2738.269 kb on - strand, within MPMX26_02643at 2738.269 kb on - strand, within MPMX26_02643at 2738.281 kb on - strand, within MPMX26_02643at 2738.295 kb on - strand, within MPMX26_02643at 2738.295 kb on - strand, within MPMX26_02643at 2738.311 kb on - strand, within MPMX26_02643at 2738.313 kb on - strand, within MPMX26_02643at 2738.328 kb on - strand, within MPMX26_02643at 2738.328 kb on - strand, within MPMX26_02643at 2738.352 kb on - strand, within MPMX26_02643at 2738.352 kb on - strand, within MPMX26_02643at 2738.378 kb on - strand, within MPMX26_02643at 2738.378 kb on - strand, within MPMX26_02643at 2738.433 kb on - strand, within MPMX26_02643at 2738.449 kb on - strand, within MPMX26_02643at 2738.451 kb on - strand, within MPMX26_02643at 2738.459 kb on - strand, within MPMX26_02643at 2738.473 kb on - strand, within MPMX26_02643at 2738.538 kb on - strandat 2738.548 kb on - strandat 2738.548 kb on - strandat 2738.594 kb on - strandat 2738.611 kb on - strandat 2738.667 kb on + strand, within MPMX26_02644at 2738.667 kb on + strand, within MPMX26_02644at 2738.667 kb on + strand, within MPMX26_02644at 2738.785 kb on + strand, within MPMX26_02644at 2738.785 kb on + strand, within MPMX26_02644at 2738.793 kb on + strand, within MPMX26_02644at 2739.017 kb on + strand, within MPMX26_02644at 2739.017 kb on + strand, within MPMX26_02644at 2739.019 kb on + strand, within MPMX26_02644at 2739.024 kb on + strand, within MPMX26_02644at 2739.036 kb on + strand, within MPMX26_02644at 2739.062 kb on + strandat 2739.089 kb on + strandat 2739.125 kb on + strandat 2739.132 kb on + strandat 2739.148 kb on + strandat 2739.148 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.169 kb on + strandat 2739.181 kb on + strand, within MPMX26_02645at 2739.186 kb on + strand, within MPMX26_02645at 2739.191 kb on + strand, within MPMX26_02645at 2739.191 kb on + strand, within MPMX26_02645at 2739.191 kb on + strand, within MPMX26_02645at 2739.191 kb on + strand, within MPMX26_02645at 2739.191 kb on + strand, within MPMX26_02645at 2739.191 kb on + strand, within MPMX26_02645at 2739.196 kb on + strand, within MPMX26_02645at 2739.198 kb on + strand, within MPMX26_02645at 2739.198 kb on + strand, within MPMX26_02645at 2739.206 kb on + strand, within MPMX26_02645at 2739.206 kb on + strand, within MPMX26_02645at 2739.236 kb on + strand, within MPMX26_02645at 2739.236 kb on + strand, within MPMX26_02645at 2739.241 kb on + strand, within MPMX26_02645at 2739.278 kb on + strand, within MPMX26_02645at 2739.282 kb on + strand, within MPMX26_02645at 2739.287 kb on + strand, within MPMX26_02645at 2739.312 kb on + strand, within MPMX26_02645at 2739.327 kb on + strand, within MPMX26_02645at 2739.327 kb on + strand, within MPMX26_02645at 2739.327 kb on + strand, within MPMX26_02645at 2739.327 kb on + strand, within MPMX26_02645at 2739.452 kb on + strand, within MPMX26_02645at 2739.467 kb on + strand, within MPMX26_02645at 2739.487 kb on + strand, within MPMX26_02645at 2739.487 kb on + strand, within MPMX26_02645at 2739.497 kb on + strand, within MPMX26_02645at 2739.497 kb on + strand, within MPMX26_02645at 2739.497 kb on + strand, within MPMX26_02645at 2739.507 kb on + strand, within MPMX26_02645at 2739.525 kb on + strand, within MPMX26_02645at 2739.549 kb on + strand, within MPMX26_02645at 2739.551 kb on + strand, within MPMX26_02645at 2739.551 kb on + strand, within MPMX26_02645at 2739.570 kb on + strand, within MPMX26_02645at 2739.581 kb on + strand, within MPMX26_02645at 2739.581 kb on + strand, within MPMX26_02645at 2739.581 kb on + strand, within MPMX26_02645at 2739.596 kb on + strandat 2739.596 kb on + strandat 2739.616 kb on + strandat 2739.616 kb on + strandat 2739.691 kb on - strandat 2739.712 kb on - strandat 2739.737 kb on - strand, within MPMX26_02646at 2739.808 kb on - strand, within MPMX26_02646at 2739.898 kb on - strand, within MPMX26_02646at 2739.898 kb on - strand, within MPMX26_02646at 2739.969 kb on - strand, within MPMX26_02646at 2739.973 kb on - strand, within MPMX26_02646at 2740.034 kb on - strand, within MPMX26_02646at 2740.068 kb on - strandat 2740.070 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
remove
2,737,656 + MPMX26_02642 0.75 -0.4
2,737,667 + MPMX26_02642 0.76 +0.0
2,737,667 + MPMX26_02642 0.76 -0.6
2,737,686 + MPMX26_02642 0.77 +0.6
2,737,686 + MPMX26_02642 0.77 +0.2
2,737,686 + MPMX26_02642 0.77 +0.1
2,737,686 + MPMX26_02642 0.77 -0.5
2,737,766 + MPMX26_02642 0.81 -1.0
2,737,766 + MPMX26_02642 0.81 +1.1
2,737,766 + MPMX26_02642 0.81 +0.4
2,737,766 + MPMX26_02642 0.81 +0.7
2,737,814 + MPMX26_02642 0.83 -0.3
2,737,814 + MPMX26_02642 0.83 -0.3
2,737,861 + MPMX26_02642 0.86 +2.5
2,737,878 + MPMX26_02642 0.87 +0.2
2,737,886 + MPMX26_02642 0.87 -0.4
2,737,887 + MPMX26_02642 0.87 +0.2
2,738,004 + -0.1
2,738,004 + +1.4
2,738,004 + -0.3
2,738,004 + +0.2
2,738,004 + -0.4
2,738,004 + +0.8
2,738,004 + -0.1
2,738,004 + +0.1
2,738,004 + -1.0
2,738,004 + -0.1
2,738,004 + -0.4
2,738,006 + -0.2
2,738,045 + -0.3
2,738,050 + +1.0
2,738,050 + -1.3
2,738,050 + +0.3
2,738,050 + +0.1
2,738,050 + -0.2
2,738,050 + +0.0
2,738,050 + -0.6
2,738,050 + -1.1
2,738,055 + +0.1
2,738,055 + -0.1
2,738,055 + -0.8
2,738,055 + -0.1
2,738,055 + -1.1
2,738,055 + -0.3
2,738,055 + +0.4
2,738,055 + -0.3
2,738,055 + +1.2
2,738,055 + +0.3
2,738,055 + -0.5
2,738,055 + +0.2
2,738,055 + +0.2
2,738,055 + +0.4
2,738,055 + -0.1
2,738,055 + -0.4
2,738,055 + -1.4
2,738,055 + -0.1
2,738,055 + -1.0
2,738,055 + +0.6
2,738,060 + -0.8
2,738,060 + -0.2
2,738,060 + +0.9
2,738,060 + -0.4
2,738,060 + +0.1
2,738,060 + +1.3
2,738,060 + -0.3
2,738,065 + +0.1
2,738,065 + +1.2
2,738,065 + -0.1
2,738,065 + +2.1
2,738,065 + +1.2
2,738,065 + +1.0
2,738,065 + +0.8
2,738,065 + +0.7
2,738,065 + -0.8
2,738,065 + +0.2
2,738,065 + +1.0
2,738,065 + -0.4
2,738,065 + +0.3
2,738,065 + -0.7
2,738,065 + +0.7
2,738,065 + -0.1
2,738,065 + -0.7
2,738,070 + -0.2
2,738,070 + -0.1
2,738,070 + -1.0
2,738,070 + +0.3
2,738,078 + -0.7
2,738,142 + -0.9
2,738,142 + +1.0
2,738,142 + -0.2
2,738,147 + -0.7
2,738,152 + +0.1
2,738,157 + -0.1
2,738,157 + -0.4
2,738,157 + -1.0
2,738,157 + +1.5
2,738,157 + -0.1
2,738,157 + -0.2
2,738,198 - -0.6
2,738,238 - -1.2
2,738,255 - MPMX26_02643 0.15 -0.4
2,738,255 - MPMX26_02643 0.15 -0.5
2,738,269 - MPMX26_02643 0.20 -1.4
2,738,269 - MPMX26_02643 0.20 +0.4
2,738,269 - MPMX26_02643 0.20 -0.9
2,738,281 - MPMX26_02643 0.23 -2.6
2,738,295 - MPMX26_02643 0.28 -1.6
2,738,295 - MPMX26_02643 0.28 -1.4
2,738,311 - MPMX26_02643 0.33 -1.1
2,738,313 - MPMX26_02643 0.34 -0.6
2,738,328 - MPMX26_02643 0.38 -1.1
2,738,328 - MPMX26_02643 0.38 -0.3
2,738,352 - MPMX26_02643 0.46 +0.7
2,738,352 - MPMX26_02643 0.46 +0.7
2,738,378 - MPMX26_02643 0.54 -2.0
2,738,378 - MPMX26_02643 0.54 -1.3
2,738,433 - MPMX26_02643 0.72 -0.8
2,738,449 - MPMX26_02643 0.77 -0.4
2,738,451 - MPMX26_02643 0.77 -1.9
2,738,459 - MPMX26_02643 0.80 -1.0
2,738,473 - MPMX26_02643 0.84 -0.8
2,738,538 - +0.9
2,738,548 - +0.7
2,738,548 - -0.6
2,738,594 - -0.6
2,738,611 - +1.2
2,738,667 + MPMX26_02644 0.11 -0.6
2,738,667 + MPMX26_02644 0.11 -2.8
2,738,667 + MPMX26_02644 0.11 -1.2
2,738,785 + MPMX26_02644 0.35 +0.7
2,738,785 + MPMX26_02644 0.35 +0.8
2,738,793 + MPMX26_02644 0.37 -0.3
2,739,017 + MPMX26_02644 0.83 -1.4
2,739,017 + MPMX26_02644 0.83 -0.0
2,739,019 + MPMX26_02644 0.83 -0.3
2,739,024 + MPMX26_02644 0.84 -0.5
2,739,036 + MPMX26_02644 0.87 -0.8
2,739,062 + +0.1
2,739,089 + -0.3
2,739,125 + -0.3
2,739,132 + -0.4
2,739,148 + -0.2
2,739,148 + -0.1
2,739,158 + -0.3
2,739,158 + +0.9
2,739,158 + -1.2
2,739,158 + +0.8
2,739,158 + -0.2
2,739,158 + +0.4
2,739,158 + +0.2
2,739,158 + -0.1
2,739,158 + -0.3
2,739,158 + +0.3
2,739,158 + -0.7
2,739,158 + +0.2
2,739,169 + -1.1
2,739,181 + MPMX26_02645 0.10 +1.2
2,739,186 + MPMX26_02645 0.11 -0.7
2,739,191 + MPMX26_02645 0.12 -1.3
2,739,191 + MPMX26_02645 0.12 -0.6
2,739,191 + MPMX26_02645 0.12 -0.3
2,739,191 + MPMX26_02645 0.12 -2.3
2,739,191 + MPMX26_02645 0.12 -0.4
2,739,191 + MPMX26_02645 0.12 +1.4
2,739,196 + MPMX26_02645 0.13 -0.1
2,739,198 + MPMX26_02645 0.14 -0.3
2,739,198 + MPMX26_02645 0.14 -0.9
2,739,206 + MPMX26_02645 0.15 +0.2
2,739,206 + MPMX26_02645 0.15 +0.0
2,739,236 + MPMX26_02645 0.21 -0.3
2,739,236 + MPMX26_02645 0.21 -0.1
2,739,241 + MPMX26_02645 0.22 -0.6
2,739,278 + MPMX26_02645 0.30 -0.2
2,739,282 + MPMX26_02645 0.30 -1.3
2,739,287 + MPMX26_02645 0.31 +0.1
2,739,312 + MPMX26_02645 0.36 -0.7
2,739,327 + MPMX26_02645 0.39 -1.5
2,739,327 + MPMX26_02645 0.39 -1.3
2,739,327 + MPMX26_02645 0.39 -0.7
2,739,327 + MPMX26_02645 0.39 -0.2
2,739,452 + MPMX26_02645 0.64 -0.4
2,739,467 + MPMX26_02645 0.67 +0.3
2,739,487 + MPMX26_02645 0.71 +0.4
2,739,487 + MPMX26_02645 0.71 -0.1
2,739,497 + MPMX26_02645 0.73 -0.3
2,739,497 + MPMX26_02645 0.73 +0.7
2,739,497 + MPMX26_02645 0.73 -0.4
2,739,507 + MPMX26_02645 0.75 +0.6
2,739,525 + MPMX26_02645 0.79 -0.7
2,739,549 + MPMX26_02645 0.83 +0.3
2,739,551 + MPMX26_02645 0.84 +0.6
2,739,551 + MPMX26_02645 0.84 +0.8
2,739,570 + MPMX26_02645 0.88 -1.2
2,739,581 + MPMX26_02645 0.90 -0.3
2,739,581 + MPMX26_02645 0.90 -0.5
2,739,581 + MPMX26_02645 0.90 -0.3
2,739,596 + -0.5
2,739,596 + -0.3
2,739,616 + -0.0
2,739,616 + +0.6
2,739,691 - +0.2
2,739,712 - -1.2
2,739,737 - MPMX26_02646 0.15 -0.3
2,739,808 - MPMX26_02646 0.31 -0.1
2,739,898 - MPMX26_02646 0.53 -0.6
2,739,898 - MPMX26_02646 0.53 -0.2
2,739,969 - MPMX26_02646 0.70 -1.0
2,739,973 - MPMX26_02646 0.70 -0.5
2,740,034 - MPMX26_02646 0.85 +0.1
2,740,068 - -0.4
2,740,070 - +0.1

Or see this region's nucleotide sequence