Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02566

Experiment: L-Proline (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02565 and MPMX26_02566 are separated by 124 nucleotidesMPMX26_02566 and MPMX26_02567 are separated by 17 nucleotidesMPMX26_02567 and MPMX26_02568 are separated by 16 nucleotides MPMX26_02565: MPMX26_02565 - hypothetical protein, at 2,659,488 to 2,660,114 _02565 MPMX26_02566: MPMX26_02566 - hypothetical protein, at 2,660,239 to 2,660,802 _02566 MPMX26_02567: MPMX26_02567 - Methylated-DNA--protein-cysteine methyltransferase, at 2,660,820 to 2,661,308 _02567 MPMX26_02568: MPMX26_02568 - Guanidinium exporter, at 2,661,325 to 2,661,645 _02568 Position (kb) 2660 2661Strain fitness (log2 ratio) -2 -1 0 1 2at 2659.680 kb on - strand, within MPMX26_02565at 2659.766 kb on - strand, within MPMX26_02565at 2659.773 kb on - strand, within MPMX26_02565at 2659.773 kb on - strand, within MPMX26_02565at 2659.773 kb on - strand, within MPMX26_02565at 2659.871 kb on - strand, within MPMX26_02565at 2659.947 kb on - strand, within MPMX26_02565at 2660.273 kb on + strandat 2660.273 kb on + strandat 2660.273 kb on + strandat 2660.288 kb on + strandat 2660.288 kb on + strandat 2660.288 kb on + strandat 2660.402 kb on + strand, within MPMX26_02566at 2660.437 kb on + strand, within MPMX26_02566at 2660.458 kb on + strand, within MPMX26_02566at 2660.458 kb on + strand, within MPMX26_02566at 2660.467 kb on + strand, within MPMX26_02566at 2660.638 kb on + strand, within MPMX26_02566at 2660.719 kb on + strand, within MPMX26_02566at 2660.719 kb on + strand, within MPMX26_02566at 2660.719 kb on + strand, within MPMX26_02566at 2660.719 kb on + strand, within MPMX26_02566at 2660.913 kb on - strand, within MPMX26_02567at 2660.914 kb on - strand, within MPMX26_02567at 2660.985 kb on - strand, within MPMX26_02567at 2660.985 kb on - strand, within MPMX26_02567at 2660.985 kb on - strand, within MPMX26_02567at 2661.011 kb on - strand, within MPMX26_02567at 2661.022 kb on - strand, within MPMX26_02567at 2661.024 kb on - strand, within MPMX26_02567at 2661.029 kb on - strand, within MPMX26_02567at 2661.055 kb on - strand, within MPMX26_02567at 2661.060 kb on - strand, within MPMX26_02567at 2661.060 kb on - strand, within MPMX26_02567at 2661.060 kb on - strand, within MPMX26_02567at 2661.060 kb on - strand, within MPMX26_02567at 2661.060 kb on - strand, within MPMX26_02567at 2661.060 kb on - strand, within MPMX26_02567at 2661.065 kb on - strand, within MPMX26_02567at 2661.095 kb on - strand, within MPMX26_02567at 2661.095 kb on - strand, within MPMX26_02567at 2661.095 kb on - strand, within MPMX26_02567at 2661.095 kb on - strand, within MPMX26_02567at 2661.095 kb on - strand, within MPMX26_02567at 2661.095 kb on - strand, within MPMX26_02567at 2661.095 kb on - strand, within MPMX26_02567at 2661.095 kb on - strand, within MPMX26_02567at 2661.095 kb on - strand, within MPMX26_02567at 2661.146 kb on - strand, within MPMX26_02567at 2661.210 kb on - strand, within MPMX26_02567at 2661.210 kb on - strand, within MPMX26_02567at 2661.210 kb on - strand, within MPMX26_02567at 2661.210 kb on - strand, within MPMX26_02567at 2661.215 kb on - strand, within MPMX26_02567at 2661.268 kb on - strandat 2661.268 kb on - strandat 2661.268 kb on - strandat 2661.268 kb on - strandat 2661.268 kb on - strandat 2661.268 kb on - strandat 2661.291 kb on - strandat 2661.291 kb on - strandat 2661.294 kb on - strandat 2661.329 kb on - strandat 2661.461 kb on - strand, within MPMX26_02568at 2661.465 kb on - strand, within MPMX26_02568at 2661.474 kb on - strand, within MPMX26_02568at 2661.474 kb on - strand, within MPMX26_02568at 2661.474 kb on - strand, within MPMX26_02568at 2661.474 kb on - strand, within MPMX26_02568at 2661.474 kb on - strand, within MPMX26_02568at 2661.475 kb on - strand, within MPMX26_02568at 2661.475 kb on - strand, within MPMX26_02568at 2661.475 kb on - strand, within MPMX26_02568at 2661.475 kb on - strand, within MPMX26_02568at 2661.475 kb on - strand, within MPMX26_02568at 2661.475 kb on - strand, within MPMX26_02568at 2661.475 kb on - strand, within MPMX26_02568at 2661.475 kb on - strand, within MPMX26_02568at 2661.475 kb on - strand, within MPMX26_02568at 2661.481 kb on - strand, within MPMX26_02568at 2661.481 kb on - strand, within MPMX26_02568at 2661.521 kb on - strand, within MPMX26_02568at 2661.521 kb on - strand, within MPMX26_02568at 2661.521 kb on - strand, within MPMX26_02568at 2661.521 kb on - strand, within MPMX26_02568at 2661.523 kb on - strand, within MPMX26_02568at 2661.523 kb on - strand, within MPMX26_02568at 2661.526 kb on - strand, within MPMX26_02568at 2661.573 kb on - strand, within MPMX26_02568at 2661.573 kb on - strand, within MPMX26_02568at 2661.583 kb on - strand, within MPMX26_02568at 2661.604 kb on - strand, within MPMX26_02568at 2661.604 kb on - strand, within MPMX26_02568at 2661.633 kb on - strandat 2661.633 kb on - strandat 2661.633 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
remove
2,659,680 - MPMX26_02565 0.31 +0.6
2,659,766 - MPMX26_02565 0.44 -1.2
2,659,773 - MPMX26_02565 0.45 +0.1
2,659,773 - MPMX26_02565 0.45 -0.5
2,659,773 - MPMX26_02565 0.45 -0.6
2,659,871 - MPMX26_02565 0.61 +0.8
2,659,947 - MPMX26_02565 0.73 -0.5
2,660,273 + +1.2
2,660,273 + +0.9
2,660,273 + +1.5
2,660,288 + -0.7
2,660,288 + -0.6
2,660,288 + +0.1
2,660,402 + MPMX26_02566 0.29 -0.6
2,660,437 + MPMX26_02566 0.35 +0.5
2,660,458 + MPMX26_02566 0.39 +1.4
2,660,458 + MPMX26_02566 0.39 -0.1
2,660,467 + MPMX26_02566 0.40 +1.8
2,660,638 + MPMX26_02566 0.71 +1.1
2,660,719 + MPMX26_02566 0.85 +1.9
2,660,719 + MPMX26_02566 0.85 +1.2
2,660,719 + MPMX26_02566 0.85 +1.2
2,660,719 + MPMX26_02566 0.85 -0.9
2,660,913 - MPMX26_02567 0.19 +0.4
2,660,914 - MPMX26_02567 0.19 -0.6
2,660,985 - MPMX26_02567 0.34 -0.3
2,660,985 - MPMX26_02567 0.34 -0.7
2,660,985 - MPMX26_02567 0.34 +0.0
2,661,011 - MPMX26_02567 0.39 -0.5
2,661,022 - MPMX26_02567 0.41 +1.9
2,661,024 - MPMX26_02567 0.42 +0.3
2,661,029 - MPMX26_02567 0.43 -0.2
2,661,055 - MPMX26_02567 0.48 +2.2
2,661,060 - MPMX26_02567 0.49 -0.7
2,661,060 - MPMX26_02567 0.49 +0.2
2,661,060 - MPMX26_02567 0.49 -1.2
2,661,060 - MPMX26_02567 0.49 +0.2
2,661,060 - MPMX26_02567 0.49 -1.3
2,661,060 - MPMX26_02567 0.49 +0.6
2,661,065 - MPMX26_02567 0.50 -0.2
2,661,095 - MPMX26_02567 0.56 +0.7
2,661,095 - MPMX26_02567 0.56 -1.6
2,661,095 - MPMX26_02567 0.56 -2.1
2,661,095 - MPMX26_02567 0.56 -1.3
2,661,095 - MPMX26_02567 0.56 -0.1
2,661,095 - MPMX26_02567 0.56 -0.2
2,661,095 - MPMX26_02567 0.56 -0.2
2,661,095 - MPMX26_02567 0.56 +0.3
2,661,095 - MPMX26_02567 0.56 +0.2
2,661,146 - MPMX26_02567 0.67 +0.3
2,661,210 - MPMX26_02567 0.80 -0.5
2,661,210 - MPMX26_02567 0.80 +0.9
2,661,210 - MPMX26_02567 0.80 +0.0
2,661,210 - MPMX26_02567 0.80 -1.3
2,661,215 - MPMX26_02567 0.81 -0.7
2,661,268 - +0.8
2,661,268 - +0.5
2,661,268 - +0.5
2,661,268 - -0.2
2,661,268 - +0.9
2,661,268 - +1.1
2,661,291 - +0.2
2,661,291 - -0.7
2,661,294 - -0.1
2,661,329 - +0.4
2,661,461 - MPMX26_02568 0.42 +1.5
2,661,465 - MPMX26_02568 0.44 +0.0
2,661,474 - MPMX26_02568 0.46 -2.1
2,661,474 - MPMX26_02568 0.46 +0.9
2,661,474 - MPMX26_02568 0.46 -0.1
2,661,474 - MPMX26_02568 0.46 -0.1
2,661,474 - MPMX26_02568 0.46 -0.6
2,661,475 - MPMX26_02568 0.47 -0.6
2,661,475 - MPMX26_02568 0.47 -0.5
2,661,475 - MPMX26_02568 0.47 -0.1
2,661,475 - MPMX26_02568 0.47 -0.9
2,661,475 - MPMX26_02568 0.47 -1.2
2,661,475 - MPMX26_02568 0.47 +0.9
2,661,475 - MPMX26_02568 0.47 +0.2
2,661,475 - MPMX26_02568 0.47 +0.2
2,661,475 - MPMX26_02568 0.47 +0.3
2,661,481 - MPMX26_02568 0.49 +0.0
2,661,481 - MPMX26_02568 0.49 +0.6
2,661,521 - MPMX26_02568 0.61 -0.2
2,661,521 - MPMX26_02568 0.61 +0.1
2,661,521 - MPMX26_02568 0.61 +1.5
2,661,521 - MPMX26_02568 0.61 +1.2
2,661,523 - MPMX26_02568 0.62 +0.3
2,661,523 - MPMX26_02568 0.62 +0.8
2,661,526 - MPMX26_02568 0.63 +0.5
2,661,573 - MPMX26_02568 0.77 +1.3
2,661,573 - MPMX26_02568 0.77 -0.5
2,661,583 - MPMX26_02568 0.80 -0.4
2,661,604 - MPMX26_02568 0.87 -0.5
2,661,604 - MPMX26_02568 0.87 -0.6
2,661,633 - +1.1
2,661,633 - +1.2
2,661,633 - -0.3

Or see this region's nucleotide sequence