Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02515 and MPMX26_02516 are separated by 12 nucleotides MPMX26_02516 and MPMX26_02517 are separated by 90 nucleotides
MPMX26_02515: MPMX26_02515 - Multidrug resistance protein MdtA, at 2,598,365 to 2,599,492
_02515
MPMX26_02516: MPMX26_02516 - Multidrug resistance protein MdtC, at 2,599,505 to 2,602,609
_02516
MPMX26_02517: MPMX26_02517 - Proline--tRNA ligase, at 2,602,700 to 2,604,415
_02517
Position (kb)
2599
2600
2601
2602
2603 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2598.547 kb on + strand, within MPMX26_02515 at 2598.560 kb on + strand, within MPMX26_02515 at 2598.573 kb on + strand, within MPMX26_02515 at 2598.581 kb on + strand, within MPMX26_02515 at 2598.647 kb on + strand, within MPMX26_02515 at 2598.665 kb on + strand, within MPMX26_02515 at 2598.665 kb on + strand, within MPMX26_02515 at 2598.682 kb on + strand, within MPMX26_02515 at 2598.736 kb on + strand, within MPMX26_02515 at 2598.823 kb on + strand, within MPMX26_02515 at 2598.846 kb on + strand, within MPMX26_02515 at 2598.870 kb on + strand, within MPMX26_02515 at 2598.875 kb on + strand, within MPMX26_02515 at 2598.884 kb on + strand, within MPMX26_02515 at 2598.920 kb on + strand, within MPMX26_02515 at 2598.920 kb on + strand, within MPMX26_02515 at 2598.941 kb on + strand, within MPMX26_02515 at 2598.970 kb on + strand, within MPMX26_02515 at 2598.970 kb on + strand, within MPMX26_02515 at 2598.970 kb on + strand, within MPMX26_02515 at 2598.989 kb on + strand, within MPMX26_02515 at 2598.989 kb on + strand, within MPMX26_02515 at 2599.008 kb on + strand, within MPMX26_02515 at 2599.024 kb on + strand, within MPMX26_02515 at 2599.052 kb on + strand, within MPMX26_02515 at 2599.097 kb on + strand, within MPMX26_02515 at 2599.102 kb on + strand, within MPMX26_02515 at 2599.102 kb on + strand, within MPMX26_02515 at 2599.102 kb on + strand, within MPMX26_02515 at 2599.102 kb on + strand, within MPMX26_02515 at 2599.112 kb on + strand, within MPMX26_02515 at 2599.112 kb on + strand, within MPMX26_02515 at 2599.112 kb on + strand, within MPMX26_02515 at 2599.112 kb on + strand, within MPMX26_02515 at 2599.112 kb on + strand, within MPMX26_02515 at 2599.112 kb on + strand, within MPMX26_02515 at 2599.117 kb on + strand, within MPMX26_02515 at 2599.122 kb on + strand, within MPMX26_02515 at 2599.202 kb on + strand, within MPMX26_02515 at 2599.258 kb on + strand, within MPMX26_02515 at 2599.258 kb on + strand, within MPMX26_02515 at 2599.270 kb on + strand, within MPMX26_02515 at 2599.270 kb on + strand, within MPMX26_02515 at 2599.270 kb on + strand, within MPMX26_02515 at 2599.270 kb on + strand, within MPMX26_02515 at 2599.301 kb on + strand, within MPMX26_02515 at 2599.315 kb on + strand, within MPMX26_02515 at 2599.315 kb on + strand, within MPMX26_02515 at 2599.418 kb on + strand at 2599.423 kb on + strand at 2599.428 kb on + strand at 2599.470 kb on + strand at 2599.474 kb on + strand at 2599.474 kb on + strand at 2599.504 kb on + strand at 2599.514 kb on + strand at 2599.514 kb on + strand at 2599.526 kb on + strand at 2599.561 kb on + strand at 2599.577 kb on + strand at 2599.602 kb on + strand at 2599.610 kb on + strand at 2599.642 kb on + strand at 2599.642 kb on + strand at 2599.642 kb on + strand at 2599.642 kb on + strand at 2599.643 kb on + strand at 2599.643 kb on + strand at 2599.643 kb on + strand at 2599.643 kb on + strand at 2599.643 kb on + strand at 2599.643 kb on + strand at 2599.645 kb on + strand at 2599.661 kb on + strand at 2599.720 kb on + strand at 2599.741 kb on + strand at 2599.799 kb on + strand at 2599.799 kb on + strand at 2599.853 kb on + strand, within MPMX26_02516 at 2599.858 kb on + strand, within MPMX26_02516 at 2599.858 kb on + strand, within MPMX26_02516 at 2599.889 kb on + strand, within MPMX26_02516 at 2599.903 kb on + strand, within MPMX26_02516 at 2599.960 kb on + strand, within MPMX26_02516 at 2599.966 kb on + strand, within MPMX26_02516 at 2599.996 kb on + strand, within MPMX26_02516 at 2599.996 kb on + strand, within MPMX26_02516 at 2599.996 kb on + strand, within MPMX26_02516 at 2599.996 kb on + strand, within MPMX26_02516 at 2600.037 kb on + strand, within MPMX26_02516 at 2600.081 kb on + strand, within MPMX26_02516 at 2600.113 kb on + strand, within MPMX26_02516 at 2600.143 kb on + strand, within MPMX26_02516 at 2600.156 kb on + strand, within MPMX26_02516 at 2600.177 kb on + strand, within MPMX26_02516 at 2600.293 kb on + strand, within MPMX26_02516 at 2600.423 kb on + strand, within MPMX26_02516 at 2600.423 kb on + strand, within MPMX26_02516 at 2600.511 kb on + strand, within MPMX26_02516 at 2600.579 kb on + strand, within MPMX26_02516 at 2600.588 kb on + strand, within MPMX26_02516 at 2600.618 kb on + strand, within MPMX26_02516 at 2600.732 kb on + strand, within MPMX26_02516 at 2600.740 kb on + strand, within MPMX26_02516 at 2600.749 kb on + strand, within MPMX26_02516 at 2600.816 kb on + strand, within MPMX26_02516 at 2600.816 kb on + strand, within MPMX26_02516 at 2600.816 kb on + strand, within MPMX26_02516 at 2600.816 kb on + strand, within MPMX26_02516 at 2600.862 kb on + strand, within MPMX26_02516 at 2600.902 kb on + strand, within MPMX26_02516 at 2600.912 kb on + strand, within MPMX26_02516 at 2600.912 kb on + strand, within MPMX26_02516 at 2600.912 kb on + strand, within MPMX26_02516 at 2600.912 kb on + strand, within MPMX26_02516 at 2600.912 kb on + strand, within MPMX26_02516 at 2600.912 kb on + strand, within MPMX26_02516 at 2600.967 kb on + strand, within MPMX26_02516 at 2601.080 kb on + strand, within MPMX26_02516 at 2601.080 kb on + strand, within MPMX26_02516 at 2601.080 kb on + strand, within MPMX26_02516 at 2601.290 kb on + strand, within MPMX26_02516 at 2601.290 kb on + strand, within MPMX26_02516 at 2601.290 kb on + strand, within MPMX26_02516 at 2601.316 kb on + strand, within MPMX26_02516 at 2601.360 kb on + strand, within MPMX26_02516 at 2601.398 kb on + strand, within MPMX26_02516 at 2601.398 kb on + strand, within MPMX26_02516 at 2601.470 kb on + strand, within MPMX26_02516 at 2601.490 kb on + strand, within MPMX26_02516 at 2601.490 kb on + strand, within MPMX26_02516 at 2601.623 kb on + strand, within MPMX26_02516 at 2601.629 kb on + strand, within MPMX26_02516 at 2601.695 kb on + strand, within MPMX26_02516 at 2601.724 kb on + strand, within MPMX26_02516 at 2601.724 kb on + strand, within MPMX26_02516 at 2601.740 kb on + strand, within MPMX26_02516 at 2601.749 kb on + strand, within MPMX26_02516 at 2601.754 kb on + strand, within MPMX26_02516 at 2601.768 kb on + strand, within MPMX26_02516 at 2601.799 kb on + strand, within MPMX26_02516 at 2601.799 kb on + strand, within MPMX26_02516 at 2601.799 kb on + strand, within MPMX26_02516 at 2601.818 kb on + strand, within MPMX26_02516 at 2601.818 kb on + strand, within MPMX26_02516 at 2601.900 kb on + strand, within MPMX26_02516 at 2601.915 kb on + strand, within MPMX26_02516 at 2601.929 kb on + strand, within MPMX26_02516 at 2601.934 kb on + strand, within MPMX26_02516 at 2601.944 kb on + strand, within MPMX26_02516 at 2601.944 kb on + strand, within MPMX26_02516 at 2602.018 kb on + strand, within MPMX26_02516 at 2602.147 kb on + strand, within MPMX26_02516 at 2602.205 kb on + strand, within MPMX26_02516 at 2602.265 kb on + strand, within MPMX26_02516 at 2602.265 kb on + strand, within MPMX26_02516 at 2602.356 kb on + strand at 2602.372 kb on + strand at 2602.372 kb on + strand at 2602.372 kb on + strand at 2602.372 kb on + strand at 2602.382 kb on + strand at 2602.384 kb on + strand at 2602.384 kb on + strand at 2602.384 kb on + strand at 2602.410 kb on + strand at 2602.417 kb on + strand at 2602.417 kb on + strand at 2602.418 kb on + strand at 2602.439 kb on + strand at 2602.439 kb on + strand at 2602.444 kb on + strand at 2602.444 kb on + strand at 2602.451 kb on + strand at 2602.458 kb on + strand at 2602.463 kb on + strand at 2602.468 kb on + strand at 2602.468 kb on + strand at 2602.480 kb on + strand at 2602.522 kb on - strand at 2602.583 kb on + strand at 2602.603 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 2,598,547 + MPMX26_02515 0.16 +0.1 2,598,560 + MPMX26_02515 0.17 -0.1 2,598,573 + MPMX26_02515 0.18 +1.5 2,598,581 + MPMX26_02515 0.19 +0.2 2,598,647 + MPMX26_02515 0.25 -0.2 2,598,665 + MPMX26_02515 0.27 -0.6 2,598,665 + MPMX26_02515 0.27 +0.3 2,598,682 + MPMX26_02515 0.28 -0.0 2,598,736 + MPMX26_02515 0.33 -0.3 2,598,823 + MPMX26_02515 0.41 +0.0 2,598,846 + MPMX26_02515 0.43 -1.1 2,598,870 + MPMX26_02515 0.45 +0.4 2,598,875 + MPMX26_02515 0.45 -0.0 2,598,884 + MPMX26_02515 0.46 +1.5 2,598,920 + MPMX26_02515 0.49 -0.8 2,598,920 + MPMX26_02515 0.49 -0.6 2,598,941 + MPMX26_02515 0.51 -0.7 2,598,970 + MPMX26_02515 0.54 -0.4 2,598,970 + MPMX26_02515 0.54 +0.2 2,598,970 + MPMX26_02515 0.54 -0.5 2,598,989 + MPMX26_02515 0.55 -0.3 2,598,989 + MPMX26_02515 0.55 -0.4 2,599,008 + MPMX26_02515 0.57 +1.3 2,599,024 + MPMX26_02515 0.58 -0.0 2,599,052 + MPMX26_02515 0.61 +0.2 2,599,097 + MPMX26_02515 0.65 -0.1 2,599,102 + MPMX26_02515 0.65 +1.3 2,599,102 + MPMX26_02515 0.65 -0.7 2,599,102 + MPMX26_02515 0.65 -0.1 2,599,102 + MPMX26_02515 0.65 -0.3 2,599,112 + MPMX26_02515 0.66 -0.5 2,599,112 + MPMX26_02515 0.66 -0.2 2,599,112 + MPMX26_02515 0.66 -1.4 2,599,112 + MPMX26_02515 0.66 +1.4 2,599,112 + MPMX26_02515 0.66 +0.4 2,599,112 + MPMX26_02515 0.66 +0.7 2,599,117 + MPMX26_02515 0.67 -0.3 2,599,122 + MPMX26_02515 0.67 -2.5 2,599,202 + MPMX26_02515 0.74 +1.5 2,599,258 + MPMX26_02515 0.79 -0.7 2,599,258 + MPMX26_02515 0.79 -0.1 2,599,270 + MPMX26_02515 0.80 +0.6 2,599,270 + MPMX26_02515 0.80 -1.6 2,599,270 + MPMX26_02515 0.80 -0.4 2,599,270 + MPMX26_02515 0.80 +0.6 2,599,301 + MPMX26_02515 0.83 +0.2 2,599,315 + MPMX26_02515 0.84 -0.9 2,599,315 + MPMX26_02515 0.84 +0.7 2,599,418 + +0.9 2,599,423 + -1.1 2,599,428 + +0.8 2,599,470 + +1.2 2,599,474 + -0.6 2,599,474 + -1.1 2,599,504 + +0.1 2,599,514 + -0.0 2,599,514 + +0.2 2,599,526 + +0.6 2,599,561 + -0.2 2,599,577 + +0.4 2,599,602 + -0.9 2,599,610 + +1.0 2,599,642 + -0.9 2,599,642 + -1.6 2,599,642 + +0.7 2,599,642 + +0.2 2,599,643 + +0.5 2,599,643 + -1.2 2,599,643 + -0.4 2,599,643 + +0.6 2,599,643 + +0.4 2,599,643 + +0.1 2,599,645 + -0.6 2,599,661 + -1.0 2,599,720 + +0.6 2,599,741 + +0.9 2,599,799 + -0.5 2,599,799 + -0.2 2,599,853 + MPMX26_02516 0.11 +0.1 2,599,858 + MPMX26_02516 0.11 -0.5 2,599,858 + MPMX26_02516 0.11 -0.6 2,599,889 + MPMX26_02516 0.12 -0.5 2,599,903 + MPMX26_02516 0.13 -1.7 2,599,960 + MPMX26_02516 0.15 -1.6 2,599,966 + MPMX26_02516 0.15 -0.4 2,599,996 + MPMX26_02516 0.16 +1.9 2,599,996 + MPMX26_02516 0.16 +0.1 2,599,996 + MPMX26_02516 0.16 -0.8 2,599,996 + MPMX26_02516 0.16 -0.4 2,600,037 + MPMX26_02516 0.17 +1.1 2,600,081 + MPMX26_02516 0.19 +0.1 2,600,113 + MPMX26_02516 0.20 +0.4 2,600,143 + MPMX26_02516 0.21 +0.8 2,600,156 + MPMX26_02516 0.21 -0.6 2,600,177 + MPMX26_02516 0.22 +1.7 2,600,293 + MPMX26_02516 0.25 -0.0 2,600,423 + MPMX26_02516 0.30 +0.5 2,600,423 + MPMX26_02516 0.30 +0.3 2,600,511 + MPMX26_02516 0.32 +0.7 2,600,579 + MPMX26_02516 0.35 +1.1 2,600,588 + MPMX26_02516 0.35 -0.6 2,600,618 + MPMX26_02516 0.36 -0.2 2,600,732 + MPMX26_02516 0.40 -0.7 2,600,740 + MPMX26_02516 0.40 -0.3 2,600,749 + MPMX26_02516 0.40 +0.8 2,600,816 + MPMX26_02516 0.42 -0.1 2,600,816 + MPMX26_02516 0.42 -0.6 2,600,816 + MPMX26_02516 0.42 +1.1 2,600,816 + MPMX26_02516 0.42 -0.0 2,600,862 + MPMX26_02516 0.44 +2.1 2,600,902 + MPMX26_02516 0.45 +0.7 2,600,912 + MPMX26_02516 0.45 +2.2 2,600,912 + MPMX26_02516 0.45 +1.7 2,600,912 + MPMX26_02516 0.45 -0.9 2,600,912 + MPMX26_02516 0.45 -0.1 2,600,912 + MPMX26_02516 0.45 +0.2 2,600,912 + MPMX26_02516 0.45 +0.2 2,600,967 + MPMX26_02516 0.47 +1.9 2,601,080 + MPMX26_02516 0.51 +0.1 2,601,080 + MPMX26_02516 0.51 +0.1 2,601,080 + MPMX26_02516 0.51 +1.9 2,601,290 + MPMX26_02516 0.57 -0.7 2,601,290 + MPMX26_02516 0.57 -0.2 2,601,290 + MPMX26_02516 0.57 +0.0 2,601,316 + MPMX26_02516 0.58 -0.6 2,601,360 + MPMX26_02516 0.60 +0.9 2,601,398 + MPMX26_02516 0.61 -1.3 2,601,398 + MPMX26_02516 0.61 +0.3 2,601,470 + MPMX26_02516 0.63 +0.3 2,601,490 + MPMX26_02516 0.64 +0.9 2,601,490 + MPMX26_02516 0.64 +0.3 2,601,623 + MPMX26_02516 0.68 -0.6 2,601,629 + MPMX26_02516 0.68 +0.1 2,601,695 + MPMX26_02516 0.71 -0.1 2,601,724 + MPMX26_02516 0.71 +0.4 2,601,724 + MPMX26_02516 0.71 +0.7 2,601,740 + MPMX26_02516 0.72 -0.6 2,601,749 + MPMX26_02516 0.72 +0.4 2,601,754 + MPMX26_02516 0.72 +1.0 2,601,768 + MPMX26_02516 0.73 -0.1 2,601,799 + MPMX26_02516 0.74 +0.2 2,601,799 + MPMX26_02516 0.74 +1.4 2,601,799 + MPMX26_02516 0.74 +0.9 2,601,818 + MPMX26_02516 0.74 -0.6 2,601,818 + MPMX26_02516 0.74 -0.3 2,601,900 + MPMX26_02516 0.77 +1.9 2,601,915 + MPMX26_02516 0.78 -0.2 2,601,929 + MPMX26_02516 0.78 -0.6 2,601,934 + MPMX26_02516 0.78 -0.3 2,601,944 + MPMX26_02516 0.79 -0.5 2,601,944 + MPMX26_02516 0.79 +0.5 2,602,018 + MPMX26_02516 0.81 +1.0 2,602,147 + MPMX26_02516 0.85 +0.9 2,602,205 + MPMX26_02516 0.87 +0.2 2,602,265 + MPMX26_02516 0.89 +0.1 2,602,265 + MPMX26_02516 0.89 -1.5 2,602,356 + +0.4 2,602,372 + -0.4 2,602,372 + -0.0 2,602,372 + +0.3 2,602,372 + -0.6 2,602,382 + -0.4 2,602,384 + +0.2 2,602,384 + +0.2 2,602,384 + -0.8 2,602,410 + +1.0 2,602,417 + -0.7 2,602,417 + +0.3 2,602,418 + -0.2 2,602,439 + +0.1 2,602,439 + +0.1 2,602,444 + +0.1 2,602,444 + -0.4 2,602,451 + +1.5 2,602,458 + -0.6 2,602,463 + -0.2 2,602,468 + +0.4 2,602,468 + -0.5 2,602,480 + +1.2 2,602,522 - +0.9 2,602,583 + +0.6 2,602,603 + +1.8
Or see this region's nucleotide sequence