Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02516

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02515 and MPMX26_02516 are separated by 12 nucleotidesMPMX26_02516 and MPMX26_02517 are separated by 90 nucleotides MPMX26_02515: MPMX26_02515 - Multidrug resistance protein MdtA, at 2,598,365 to 2,599,492 _02515 MPMX26_02516: MPMX26_02516 - Multidrug resistance protein MdtC, at 2,599,505 to 2,602,609 _02516 MPMX26_02517: MPMX26_02517 - Proline--tRNA ligase, at 2,602,700 to 2,604,415 _02517 Position (kb) 2599 2600 2601 2602 2603Strain fitness (log2 ratio) -2 -1 0 1 2at 2598.547 kb on + strand, within MPMX26_02515at 2598.560 kb on + strand, within MPMX26_02515at 2598.573 kb on + strand, within MPMX26_02515at 2598.581 kb on + strand, within MPMX26_02515at 2598.647 kb on + strand, within MPMX26_02515at 2598.665 kb on + strand, within MPMX26_02515at 2598.665 kb on + strand, within MPMX26_02515at 2598.682 kb on + strand, within MPMX26_02515at 2598.736 kb on + strand, within MPMX26_02515at 2598.823 kb on + strand, within MPMX26_02515at 2598.846 kb on + strand, within MPMX26_02515at 2598.870 kb on + strand, within MPMX26_02515at 2598.875 kb on + strand, within MPMX26_02515at 2598.884 kb on + strand, within MPMX26_02515at 2598.920 kb on + strand, within MPMX26_02515at 2598.920 kb on + strand, within MPMX26_02515at 2598.941 kb on + strand, within MPMX26_02515at 2598.970 kb on + strand, within MPMX26_02515at 2598.970 kb on + strand, within MPMX26_02515at 2598.970 kb on + strand, within MPMX26_02515at 2598.989 kb on + strand, within MPMX26_02515at 2598.989 kb on + strand, within MPMX26_02515at 2599.008 kb on + strand, within MPMX26_02515at 2599.024 kb on + strand, within MPMX26_02515at 2599.052 kb on + strand, within MPMX26_02515at 2599.097 kb on + strand, within MPMX26_02515at 2599.102 kb on + strand, within MPMX26_02515at 2599.102 kb on + strand, within MPMX26_02515at 2599.102 kb on + strand, within MPMX26_02515at 2599.102 kb on + strand, within MPMX26_02515at 2599.112 kb on + strand, within MPMX26_02515at 2599.112 kb on + strand, within MPMX26_02515at 2599.112 kb on + strand, within MPMX26_02515at 2599.112 kb on + strand, within MPMX26_02515at 2599.112 kb on + strand, within MPMX26_02515at 2599.112 kb on + strand, within MPMX26_02515at 2599.117 kb on + strand, within MPMX26_02515at 2599.122 kb on + strand, within MPMX26_02515at 2599.202 kb on + strand, within MPMX26_02515at 2599.258 kb on + strand, within MPMX26_02515at 2599.258 kb on + strand, within MPMX26_02515at 2599.270 kb on + strand, within MPMX26_02515at 2599.270 kb on + strand, within MPMX26_02515at 2599.270 kb on + strand, within MPMX26_02515at 2599.270 kb on + strand, within MPMX26_02515at 2599.301 kb on + strand, within MPMX26_02515at 2599.315 kb on + strand, within MPMX26_02515at 2599.315 kb on + strand, within MPMX26_02515at 2599.418 kb on + strandat 2599.423 kb on + strandat 2599.428 kb on + strandat 2599.470 kb on + strandat 2599.474 kb on + strandat 2599.474 kb on + strandat 2599.504 kb on + strandat 2599.514 kb on + strandat 2599.514 kb on + strandat 2599.526 kb on + strandat 2599.561 kb on + strandat 2599.577 kb on + strandat 2599.602 kb on + strandat 2599.610 kb on + strandat 2599.642 kb on + strandat 2599.642 kb on + strandat 2599.642 kb on + strandat 2599.642 kb on + strandat 2599.643 kb on + strandat 2599.643 kb on + strandat 2599.643 kb on + strandat 2599.643 kb on + strandat 2599.643 kb on + strandat 2599.643 kb on + strandat 2599.645 kb on + strandat 2599.661 kb on + strandat 2599.720 kb on + strandat 2599.741 kb on + strandat 2599.799 kb on + strandat 2599.799 kb on + strandat 2599.853 kb on + strand, within MPMX26_02516at 2599.858 kb on + strand, within MPMX26_02516at 2599.858 kb on + strand, within MPMX26_02516at 2599.889 kb on + strand, within MPMX26_02516at 2599.903 kb on + strand, within MPMX26_02516at 2599.960 kb on + strand, within MPMX26_02516at 2599.966 kb on + strand, within MPMX26_02516at 2599.996 kb on + strand, within MPMX26_02516at 2599.996 kb on + strand, within MPMX26_02516at 2599.996 kb on + strand, within MPMX26_02516at 2599.996 kb on + strand, within MPMX26_02516at 2600.037 kb on + strand, within MPMX26_02516at 2600.081 kb on + strand, within MPMX26_02516at 2600.113 kb on + strand, within MPMX26_02516at 2600.143 kb on + strand, within MPMX26_02516at 2600.156 kb on + strand, within MPMX26_02516at 2600.177 kb on + strand, within MPMX26_02516at 2600.293 kb on + strand, within MPMX26_02516at 2600.423 kb on + strand, within MPMX26_02516at 2600.423 kb on + strand, within MPMX26_02516at 2600.511 kb on + strand, within MPMX26_02516at 2600.579 kb on + strand, within MPMX26_02516at 2600.588 kb on + strand, within MPMX26_02516at 2600.618 kb on + strand, within MPMX26_02516at 2600.732 kb on + strand, within MPMX26_02516at 2600.740 kb on + strand, within MPMX26_02516at 2600.749 kb on + strand, within MPMX26_02516at 2600.816 kb on + strand, within MPMX26_02516at 2600.816 kb on + strand, within MPMX26_02516at 2600.816 kb on + strand, within MPMX26_02516at 2600.816 kb on + strand, within MPMX26_02516at 2600.862 kb on + strand, within MPMX26_02516at 2600.902 kb on + strand, within MPMX26_02516at 2600.912 kb on + strand, within MPMX26_02516at 2600.912 kb on + strand, within MPMX26_02516at 2600.912 kb on + strand, within MPMX26_02516at 2600.912 kb on + strand, within MPMX26_02516at 2600.912 kb on + strand, within MPMX26_02516at 2600.912 kb on + strand, within MPMX26_02516at 2600.967 kb on + strand, within MPMX26_02516at 2601.080 kb on + strand, within MPMX26_02516at 2601.080 kb on + strand, within MPMX26_02516at 2601.080 kb on + strand, within MPMX26_02516at 2601.290 kb on + strand, within MPMX26_02516at 2601.290 kb on + strand, within MPMX26_02516at 2601.290 kb on + strand, within MPMX26_02516at 2601.316 kb on + strand, within MPMX26_02516at 2601.360 kb on + strand, within MPMX26_02516at 2601.398 kb on + strand, within MPMX26_02516at 2601.398 kb on + strand, within MPMX26_02516at 2601.470 kb on + strand, within MPMX26_02516at 2601.490 kb on + strand, within MPMX26_02516at 2601.490 kb on + strand, within MPMX26_02516at 2601.623 kb on + strand, within MPMX26_02516at 2601.629 kb on + strand, within MPMX26_02516at 2601.695 kb on + strand, within MPMX26_02516at 2601.724 kb on + strand, within MPMX26_02516at 2601.724 kb on + strand, within MPMX26_02516at 2601.740 kb on + strand, within MPMX26_02516at 2601.749 kb on + strand, within MPMX26_02516at 2601.754 kb on + strand, within MPMX26_02516at 2601.768 kb on + strand, within MPMX26_02516at 2601.799 kb on + strand, within MPMX26_02516at 2601.799 kb on + strand, within MPMX26_02516at 2601.799 kb on + strand, within MPMX26_02516at 2601.818 kb on + strand, within MPMX26_02516at 2601.818 kb on + strand, within MPMX26_02516at 2601.900 kb on + strand, within MPMX26_02516at 2601.915 kb on + strand, within MPMX26_02516at 2601.929 kb on + strand, within MPMX26_02516at 2601.934 kb on + strand, within MPMX26_02516at 2601.944 kb on + strand, within MPMX26_02516at 2601.944 kb on + strand, within MPMX26_02516at 2602.018 kb on + strand, within MPMX26_02516at 2602.147 kb on + strand, within MPMX26_02516at 2602.205 kb on + strand, within MPMX26_02516at 2602.265 kb on + strand, within MPMX26_02516at 2602.265 kb on + strand, within MPMX26_02516at 2602.356 kb on + strandat 2602.372 kb on + strandat 2602.372 kb on + strandat 2602.372 kb on + strandat 2602.372 kb on + strandat 2602.382 kb on + strandat 2602.384 kb on + strandat 2602.384 kb on + strandat 2602.384 kb on + strandat 2602.410 kb on + strandat 2602.417 kb on + strandat 2602.417 kb on + strandat 2602.418 kb on + strandat 2602.439 kb on + strandat 2602.439 kb on + strandat 2602.444 kb on + strandat 2602.444 kb on + strandat 2602.451 kb on + strandat 2602.458 kb on + strandat 2602.463 kb on + strandat 2602.468 kb on + strandat 2602.468 kb on + strandat 2602.480 kb on + strandat 2602.522 kb on - strandat 2602.583 kb on + strandat 2602.603 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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2,598,547 + MPMX26_02515 0.16 +0.1
2,598,560 + MPMX26_02515 0.17 -0.1
2,598,573 + MPMX26_02515 0.18 +1.5
2,598,581 + MPMX26_02515 0.19 +0.2
2,598,647 + MPMX26_02515 0.25 -0.2
2,598,665 + MPMX26_02515 0.27 -0.6
2,598,665 + MPMX26_02515 0.27 +0.3
2,598,682 + MPMX26_02515 0.28 -0.0
2,598,736 + MPMX26_02515 0.33 -0.3
2,598,823 + MPMX26_02515 0.41 +0.0
2,598,846 + MPMX26_02515 0.43 -1.1
2,598,870 + MPMX26_02515 0.45 +0.4
2,598,875 + MPMX26_02515 0.45 -0.0
2,598,884 + MPMX26_02515 0.46 +1.5
2,598,920 + MPMX26_02515 0.49 -0.8
2,598,920 + MPMX26_02515 0.49 -0.6
2,598,941 + MPMX26_02515 0.51 -0.7
2,598,970 + MPMX26_02515 0.54 -0.4
2,598,970 + MPMX26_02515 0.54 +0.2
2,598,970 + MPMX26_02515 0.54 -0.5
2,598,989 + MPMX26_02515 0.55 -0.3
2,598,989 + MPMX26_02515 0.55 -0.4
2,599,008 + MPMX26_02515 0.57 +1.3
2,599,024 + MPMX26_02515 0.58 -0.0
2,599,052 + MPMX26_02515 0.61 +0.2
2,599,097 + MPMX26_02515 0.65 -0.1
2,599,102 + MPMX26_02515 0.65 +1.3
2,599,102 + MPMX26_02515 0.65 -0.7
2,599,102 + MPMX26_02515 0.65 -0.1
2,599,102 + MPMX26_02515 0.65 -0.3
2,599,112 + MPMX26_02515 0.66 -0.5
2,599,112 + MPMX26_02515 0.66 -0.2
2,599,112 + MPMX26_02515 0.66 -1.4
2,599,112 + MPMX26_02515 0.66 +1.4
2,599,112 + MPMX26_02515 0.66 +0.4
2,599,112 + MPMX26_02515 0.66 +0.7
2,599,117 + MPMX26_02515 0.67 -0.3
2,599,122 + MPMX26_02515 0.67 -2.5
2,599,202 + MPMX26_02515 0.74 +1.5
2,599,258 + MPMX26_02515 0.79 -0.7
2,599,258 + MPMX26_02515 0.79 -0.1
2,599,270 + MPMX26_02515 0.80 +0.6
2,599,270 + MPMX26_02515 0.80 -1.6
2,599,270 + MPMX26_02515 0.80 -0.4
2,599,270 + MPMX26_02515 0.80 +0.6
2,599,301 + MPMX26_02515 0.83 +0.2
2,599,315 + MPMX26_02515 0.84 -0.9
2,599,315 + MPMX26_02515 0.84 +0.7
2,599,418 + +0.9
2,599,423 + -1.1
2,599,428 + +0.8
2,599,470 + +1.2
2,599,474 + -0.6
2,599,474 + -1.1
2,599,504 + +0.1
2,599,514 + -0.0
2,599,514 + +0.2
2,599,526 + +0.6
2,599,561 + -0.2
2,599,577 + +0.4
2,599,602 + -0.9
2,599,610 + +1.0
2,599,642 + -0.9
2,599,642 + -1.6
2,599,642 + +0.7
2,599,642 + +0.2
2,599,643 + +0.5
2,599,643 + -1.2
2,599,643 + -0.4
2,599,643 + +0.6
2,599,643 + +0.4
2,599,643 + +0.1
2,599,645 + -0.6
2,599,661 + -1.0
2,599,720 + +0.6
2,599,741 + +0.9
2,599,799 + -0.5
2,599,799 + -0.2
2,599,853 + MPMX26_02516 0.11 +0.1
2,599,858 + MPMX26_02516 0.11 -0.5
2,599,858 + MPMX26_02516 0.11 -0.6
2,599,889 + MPMX26_02516 0.12 -0.5
2,599,903 + MPMX26_02516 0.13 -1.7
2,599,960 + MPMX26_02516 0.15 -1.6
2,599,966 + MPMX26_02516 0.15 -0.4
2,599,996 + MPMX26_02516 0.16 +1.9
2,599,996 + MPMX26_02516 0.16 +0.1
2,599,996 + MPMX26_02516 0.16 -0.8
2,599,996 + MPMX26_02516 0.16 -0.4
2,600,037 + MPMX26_02516 0.17 +1.1
2,600,081 + MPMX26_02516 0.19 +0.1
2,600,113 + MPMX26_02516 0.20 +0.4
2,600,143 + MPMX26_02516 0.21 +0.8
2,600,156 + MPMX26_02516 0.21 -0.6
2,600,177 + MPMX26_02516 0.22 +1.7
2,600,293 + MPMX26_02516 0.25 -0.0
2,600,423 + MPMX26_02516 0.30 +0.5
2,600,423 + MPMX26_02516 0.30 +0.3
2,600,511 + MPMX26_02516 0.32 +0.7
2,600,579 + MPMX26_02516 0.35 +1.1
2,600,588 + MPMX26_02516 0.35 -0.6
2,600,618 + MPMX26_02516 0.36 -0.2
2,600,732 + MPMX26_02516 0.40 -0.7
2,600,740 + MPMX26_02516 0.40 -0.3
2,600,749 + MPMX26_02516 0.40 +0.8
2,600,816 + MPMX26_02516 0.42 -0.1
2,600,816 + MPMX26_02516 0.42 -0.6
2,600,816 + MPMX26_02516 0.42 +1.1
2,600,816 + MPMX26_02516 0.42 -0.0
2,600,862 + MPMX26_02516 0.44 +2.1
2,600,902 + MPMX26_02516 0.45 +0.7
2,600,912 + MPMX26_02516 0.45 +2.2
2,600,912 + MPMX26_02516 0.45 +1.7
2,600,912 + MPMX26_02516 0.45 -0.9
2,600,912 + MPMX26_02516 0.45 -0.1
2,600,912 + MPMX26_02516 0.45 +0.2
2,600,912 + MPMX26_02516 0.45 +0.2
2,600,967 + MPMX26_02516 0.47 +1.9
2,601,080 + MPMX26_02516 0.51 +0.1
2,601,080 + MPMX26_02516 0.51 +0.1
2,601,080 + MPMX26_02516 0.51 +1.9
2,601,290 + MPMX26_02516 0.57 -0.7
2,601,290 + MPMX26_02516 0.57 -0.2
2,601,290 + MPMX26_02516 0.57 +0.0
2,601,316 + MPMX26_02516 0.58 -0.6
2,601,360 + MPMX26_02516 0.60 +0.9
2,601,398 + MPMX26_02516 0.61 -1.3
2,601,398 + MPMX26_02516 0.61 +0.3
2,601,470 + MPMX26_02516 0.63 +0.3
2,601,490 + MPMX26_02516 0.64 +0.9
2,601,490 + MPMX26_02516 0.64 +0.3
2,601,623 + MPMX26_02516 0.68 -0.6
2,601,629 + MPMX26_02516 0.68 +0.1
2,601,695 + MPMX26_02516 0.71 -0.1
2,601,724 + MPMX26_02516 0.71 +0.4
2,601,724 + MPMX26_02516 0.71 +0.7
2,601,740 + MPMX26_02516 0.72 -0.6
2,601,749 + MPMX26_02516 0.72 +0.4
2,601,754 + MPMX26_02516 0.72 +1.0
2,601,768 + MPMX26_02516 0.73 -0.1
2,601,799 + MPMX26_02516 0.74 +0.2
2,601,799 + MPMX26_02516 0.74 +1.4
2,601,799 + MPMX26_02516 0.74 +0.9
2,601,818 + MPMX26_02516 0.74 -0.6
2,601,818 + MPMX26_02516 0.74 -0.3
2,601,900 + MPMX26_02516 0.77 +1.9
2,601,915 + MPMX26_02516 0.78 -0.2
2,601,929 + MPMX26_02516 0.78 -0.6
2,601,934 + MPMX26_02516 0.78 -0.3
2,601,944 + MPMX26_02516 0.79 -0.5
2,601,944 + MPMX26_02516 0.79 +0.5
2,602,018 + MPMX26_02516 0.81 +1.0
2,602,147 + MPMX26_02516 0.85 +0.9
2,602,205 + MPMX26_02516 0.87 +0.2
2,602,265 + MPMX26_02516 0.89 +0.1
2,602,265 + MPMX26_02516 0.89 -1.5
2,602,356 + +0.4
2,602,372 + -0.4
2,602,372 + -0.0
2,602,372 + +0.3
2,602,372 + -0.6
2,602,382 + -0.4
2,602,384 + +0.2
2,602,384 + +0.2
2,602,384 + -0.8
2,602,410 + +1.0
2,602,417 + -0.7
2,602,417 + +0.3
2,602,418 + -0.2
2,602,439 + +0.1
2,602,439 + +0.1
2,602,444 + +0.1
2,602,444 + -0.4
2,602,451 + +1.5
2,602,458 + -0.6
2,602,463 + -0.2
2,602,468 + +0.4
2,602,468 + -0.5
2,602,480 + +1.2
2,602,522 - +0.9
2,602,583 + +0.6
2,602,603 + +1.8

Or see this region's nucleotide sequence