Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02142 and MPMX26_02143 are separated by 193 nucleotides MPMX26_02143 and MPMX26_02144 are separated by 221 nucleotides
MPMX26_02142: MPMX26_02142 - UvrABC system protein B, at 2,199,625 to 2,201,646
_02142
MPMX26_02143: MPMX26_02143 - hypothetical protein, at 2,201,840 to 2,202,643
_02143
MPMX26_02144: MPMX26_02144 - hypothetical protein, at 2,202,865 to 2,204,298
_02144
Position (kb)
2201
2202
2203 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2200.936 kb on - strand, within MPMX26_02142 at 2200.936 kb on - strand, within MPMX26_02142 at 2200.936 kb on - strand, within MPMX26_02142 at 2200.964 kb on - strand, within MPMX26_02142 at 2200.964 kb on - strand, within MPMX26_02142 at 2200.981 kb on - strand, within MPMX26_02142 at 2201.024 kb on - strand, within MPMX26_02142 at 2201.024 kb on - strand, within MPMX26_02142 at 2201.033 kb on - strand, within MPMX26_02142 at 2201.064 kb on - strand, within MPMX26_02142 at 2201.115 kb on - strand, within MPMX26_02142 at 2201.167 kb on - strand, within MPMX26_02142 at 2201.208 kb on - strand, within MPMX26_02142 at 2201.272 kb on - strand, within MPMX26_02142 at 2201.385 kb on - strand, within MPMX26_02142 at 2201.425 kb on - strand, within MPMX26_02142 at 2201.430 kb on - strand, within MPMX26_02142 at 2201.446 kb on - strand at 2201.467 kb on - strand at 2201.481 kb on - strand at 2201.501 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.506 kb on - strand at 2201.511 kb on - strand at 2201.548 kb on - strand at 2201.569 kb on - strand at 2201.569 kb on - strand at 2201.569 kb on - strand at 2201.569 kb on - strand at 2201.590 kb on - strand at 2201.601 kb on - strand at 2201.611 kb on - strand at 2201.611 kb on - strand at 2201.611 kb on - strand at 2201.611 kb on - strand at 2201.611 kb on - strand at 2201.611 kb on - strand at 2201.652 kb on - strand at 2201.869 kb on + strand at 2201.912 kb on + strand at 2201.921 kb on + strand, within MPMX26_02143 at 2201.921 kb on + strand, within MPMX26_02143 at 2201.921 kb on + strand, within MPMX26_02143 at 2201.929 kb on + strand, within MPMX26_02143 at 2201.978 kb on + strand, within MPMX26_02143 at 2201.989 kb on + strand, within MPMX26_02143 at 2201.989 kb on + strand, within MPMX26_02143 at 2201.989 kb on + strand, within MPMX26_02143 at 2201.989 kb on + strand, within MPMX26_02143 at 2201.999 kb on + strand, within MPMX26_02143 at 2201.999 kb on + strand, within MPMX26_02143 at 2201.999 kb on + strand, within MPMX26_02143 at 2201.999 kb on + strand, within MPMX26_02143 at 2202.085 kb on + strand, within MPMX26_02143 at 2202.086 kb on + strand, within MPMX26_02143 at 2202.128 kb on + strand, within MPMX26_02143 at 2202.128 kb on + strand, within MPMX26_02143 at 2202.128 kb on + strand, within MPMX26_02143 at 2202.128 kb on + strand, within MPMX26_02143 at 2202.158 kb on + strand, within MPMX26_02143 at 2202.253 kb on + strand, within MPMX26_02143 at 2202.344 kb on + strand, within MPMX26_02143 at 2202.419 kb on + strand, within MPMX26_02143 at 2202.427 kb on + strand, within MPMX26_02143 at 2202.427 kb on + strand, within MPMX26_02143 at 2202.427 kb on + strand, within MPMX26_02143 at 2202.427 kb on + strand, within MPMX26_02143 at 2202.446 kb on + strand, within MPMX26_02143 at 2202.515 kb on + strand, within MPMX26_02143 at 2202.515 kb on + strand, within MPMX26_02143 at 2202.515 kb on + strand, within MPMX26_02143 at 2202.515 kb on + strand, within MPMX26_02143 at 2202.586 kb on + strand at 2202.967 kb on + strand at 2202.968 kb on + strand at 2203.162 kb on + strand, within MPMX26_02144 at 2203.288 kb on + strand, within MPMX26_02144 at 2203.402 kb on + strand, within MPMX26_02144 at 2203.500 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.551 kb on + strand, within MPMX26_02144 at 2203.615 kb on + strand, within MPMX26_02144 at 2203.615 kb on + strand, within MPMX26_02144 at 2203.633 kb on + strand, within MPMX26_02144
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 2,200,936 - MPMX26_02142 0.65 +0.8 2,200,936 - MPMX26_02142 0.65 +0.3 2,200,936 - MPMX26_02142 0.65 -0.5 2,200,964 - MPMX26_02142 0.66 +0.9 2,200,964 - MPMX26_02142 0.66 -0.0 2,200,981 - MPMX26_02142 0.67 +0.0 2,201,024 - MPMX26_02142 0.69 +1.3 2,201,024 - MPMX26_02142 0.69 +1.9 2,201,033 - MPMX26_02142 0.70 +1.0 2,201,064 - MPMX26_02142 0.71 -0.6 2,201,115 - MPMX26_02142 0.74 -0.9 2,201,167 - MPMX26_02142 0.76 +0.1 2,201,208 - MPMX26_02142 0.78 +0.2 2,201,272 - MPMX26_02142 0.81 +0.3 2,201,385 - MPMX26_02142 0.87 +0.2 2,201,425 - MPMX26_02142 0.89 +0.1 2,201,430 - MPMX26_02142 0.89 +0.3 2,201,446 - -0.4 2,201,467 - -0.3 2,201,481 - -0.1 2,201,501 - -0.0 2,201,506 - +0.3 2,201,506 - +0.0 2,201,506 - +0.3 2,201,506 - +0.1 2,201,506 - -0.4 2,201,506 - -0.0 2,201,506 - -0.5 2,201,506 - -0.6 2,201,506 - +0.3 2,201,506 - +0.0 2,201,506 - -0.4 2,201,506 - -0.2 2,201,506 - -1.4 2,201,506 - -0.2 2,201,511 - +0.7 2,201,548 - +0.1 2,201,569 - +0.2 2,201,569 - -0.9 2,201,569 - -0.5 2,201,569 - -0.5 2,201,590 - +0.5 2,201,601 - +0.6 2,201,611 - -0.2 2,201,611 - -0.8 2,201,611 - -1.3 2,201,611 - +0.3 2,201,611 - +0.8 2,201,611 - +0.7 2,201,652 - -0.8 2,201,869 + +0.0 2,201,912 + +0.3 2,201,921 + MPMX26_02143 0.10 -1.1 2,201,921 + MPMX26_02143 0.10 +0.9 2,201,921 + MPMX26_02143 0.10 +1.0 2,201,929 + MPMX26_02143 0.11 -1.2 2,201,978 + MPMX26_02143 0.17 -0.3 2,201,989 + MPMX26_02143 0.19 +0.5 2,201,989 + MPMX26_02143 0.19 -0.7 2,201,989 + MPMX26_02143 0.19 +0.6 2,201,989 + MPMX26_02143 0.19 -0.9 2,201,999 + MPMX26_02143 0.20 +0.2 2,201,999 + MPMX26_02143 0.20 +0.7 2,201,999 + MPMX26_02143 0.20 +0.2 2,201,999 + MPMX26_02143 0.20 -0.7 2,202,085 + MPMX26_02143 0.30 +0.1 2,202,086 + MPMX26_02143 0.31 +0.3 2,202,128 + MPMX26_02143 0.36 -0.1 2,202,128 + MPMX26_02143 0.36 +1.5 2,202,128 + MPMX26_02143 0.36 +0.0 2,202,128 + MPMX26_02143 0.36 +0.3 2,202,158 + MPMX26_02143 0.40 -0.6 2,202,253 + MPMX26_02143 0.51 -2.1 2,202,344 + MPMX26_02143 0.63 +0.6 2,202,419 + MPMX26_02143 0.72 +0.5 2,202,427 + MPMX26_02143 0.73 +0.3 2,202,427 + MPMX26_02143 0.73 -0.6 2,202,427 + MPMX26_02143 0.73 -1.7 2,202,427 + MPMX26_02143 0.73 +0.4 2,202,446 + MPMX26_02143 0.75 -0.3 2,202,515 + MPMX26_02143 0.84 -0.6 2,202,515 + MPMX26_02143 0.84 -1.1 2,202,515 + MPMX26_02143 0.84 -0.7 2,202,515 + MPMX26_02143 0.84 -0.0 2,202,586 + -0.9 2,202,967 + -0.8 2,202,968 + -1.6 2,203,162 + MPMX26_02144 0.21 +0.5 2,203,288 + MPMX26_02144 0.29 -0.4 2,203,402 + MPMX26_02144 0.37 +0.8 2,203,500 + MPMX26_02144 0.44 +0.7 2,203,540 + MPMX26_02144 0.47 +0.6 2,203,540 + MPMX26_02144 0.47 -0.2 2,203,540 + MPMX26_02144 0.47 -0.4 2,203,540 + MPMX26_02144 0.47 +0.5 2,203,540 + MPMX26_02144 0.47 -0.5 2,203,540 + MPMX26_02144 0.47 -0.3 2,203,540 + MPMX26_02144 0.47 -0.7 2,203,551 + MPMX26_02144 0.48 -1.6 2,203,615 + MPMX26_02144 0.52 -0.0 2,203,615 + MPMX26_02144 0.52 +0.2 2,203,633 + MPMX26_02144 0.54 -0.6
Or see this region's nucleotide sequence