Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02143

Experiment: L-Proline (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02142 and MPMX26_02143 are separated by 193 nucleotidesMPMX26_02143 and MPMX26_02144 are separated by 221 nucleotides MPMX26_02142: MPMX26_02142 - UvrABC system protein B, at 2,199,625 to 2,201,646 _02142 MPMX26_02143: MPMX26_02143 - hypothetical protein, at 2,201,840 to 2,202,643 _02143 MPMX26_02144: MPMX26_02144 - hypothetical protein, at 2,202,865 to 2,204,298 _02144 Position (kb) 2201 2202 2203Strain fitness (log2 ratio) -2 -1 0 1 2at 2200.936 kb on - strand, within MPMX26_02142at 2200.936 kb on - strand, within MPMX26_02142at 2200.936 kb on - strand, within MPMX26_02142at 2200.964 kb on - strand, within MPMX26_02142at 2200.964 kb on - strand, within MPMX26_02142at 2200.981 kb on - strand, within MPMX26_02142at 2201.024 kb on - strand, within MPMX26_02142at 2201.024 kb on - strand, within MPMX26_02142at 2201.033 kb on - strand, within MPMX26_02142at 2201.064 kb on - strand, within MPMX26_02142at 2201.115 kb on - strand, within MPMX26_02142at 2201.167 kb on - strand, within MPMX26_02142at 2201.208 kb on - strand, within MPMX26_02142at 2201.272 kb on - strand, within MPMX26_02142at 2201.385 kb on - strand, within MPMX26_02142at 2201.425 kb on - strand, within MPMX26_02142at 2201.430 kb on - strand, within MPMX26_02142at 2201.446 kb on - strandat 2201.467 kb on - strandat 2201.481 kb on - strandat 2201.501 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.506 kb on - strandat 2201.511 kb on - strandat 2201.548 kb on - strandat 2201.569 kb on - strandat 2201.569 kb on - strandat 2201.569 kb on - strandat 2201.569 kb on - strandat 2201.590 kb on - strandat 2201.601 kb on - strandat 2201.611 kb on - strandat 2201.611 kb on - strandat 2201.611 kb on - strandat 2201.611 kb on - strandat 2201.611 kb on - strandat 2201.611 kb on - strandat 2201.652 kb on - strandat 2201.869 kb on + strandat 2201.912 kb on + strandat 2201.921 kb on + strand, within MPMX26_02143at 2201.921 kb on + strand, within MPMX26_02143at 2201.921 kb on + strand, within MPMX26_02143at 2201.929 kb on + strand, within MPMX26_02143at 2201.978 kb on + strand, within MPMX26_02143at 2201.989 kb on + strand, within MPMX26_02143at 2201.989 kb on + strand, within MPMX26_02143at 2201.989 kb on + strand, within MPMX26_02143at 2201.989 kb on + strand, within MPMX26_02143at 2201.999 kb on + strand, within MPMX26_02143at 2201.999 kb on + strand, within MPMX26_02143at 2201.999 kb on + strand, within MPMX26_02143at 2201.999 kb on + strand, within MPMX26_02143at 2202.085 kb on + strand, within MPMX26_02143at 2202.086 kb on + strand, within MPMX26_02143at 2202.128 kb on + strand, within MPMX26_02143at 2202.128 kb on + strand, within MPMX26_02143at 2202.128 kb on + strand, within MPMX26_02143at 2202.128 kb on + strand, within MPMX26_02143at 2202.158 kb on + strand, within MPMX26_02143at 2202.253 kb on + strand, within MPMX26_02143at 2202.344 kb on + strand, within MPMX26_02143at 2202.419 kb on + strand, within MPMX26_02143at 2202.427 kb on + strand, within MPMX26_02143at 2202.427 kb on + strand, within MPMX26_02143at 2202.427 kb on + strand, within MPMX26_02143at 2202.427 kb on + strand, within MPMX26_02143at 2202.446 kb on + strand, within MPMX26_02143at 2202.515 kb on + strand, within MPMX26_02143at 2202.515 kb on + strand, within MPMX26_02143at 2202.515 kb on + strand, within MPMX26_02143at 2202.515 kb on + strand, within MPMX26_02143at 2202.586 kb on + strandat 2202.967 kb on + strandat 2202.968 kb on + strandat 2203.162 kb on + strand, within MPMX26_02144at 2203.288 kb on + strand, within MPMX26_02144at 2203.402 kb on + strand, within MPMX26_02144at 2203.500 kb on + strand, within MPMX26_02144at 2203.540 kb on + strand, within MPMX26_02144at 2203.540 kb on + strand, within MPMX26_02144at 2203.540 kb on + strand, within MPMX26_02144at 2203.540 kb on + strand, within MPMX26_02144at 2203.540 kb on + strand, within MPMX26_02144at 2203.540 kb on + strand, within MPMX26_02144at 2203.540 kb on + strand, within MPMX26_02144at 2203.551 kb on + strand, within MPMX26_02144at 2203.615 kb on + strand, within MPMX26_02144at 2203.615 kb on + strand, within MPMX26_02144at 2203.633 kb on + strand, within MPMX26_02144

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
remove
2,200,936 - MPMX26_02142 0.65 +0.8
2,200,936 - MPMX26_02142 0.65 +0.3
2,200,936 - MPMX26_02142 0.65 -0.5
2,200,964 - MPMX26_02142 0.66 +0.9
2,200,964 - MPMX26_02142 0.66 -0.0
2,200,981 - MPMX26_02142 0.67 +0.0
2,201,024 - MPMX26_02142 0.69 +1.3
2,201,024 - MPMX26_02142 0.69 +1.9
2,201,033 - MPMX26_02142 0.70 +1.0
2,201,064 - MPMX26_02142 0.71 -0.6
2,201,115 - MPMX26_02142 0.74 -0.9
2,201,167 - MPMX26_02142 0.76 +0.1
2,201,208 - MPMX26_02142 0.78 +0.2
2,201,272 - MPMX26_02142 0.81 +0.3
2,201,385 - MPMX26_02142 0.87 +0.2
2,201,425 - MPMX26_02142 0.89 +0.1
2,201,430 - MPMX26_02142 0.89 +0.3
2,201,446 - -0.4
2,201,467 - -0.3
2,201,481 - -0.1
2,201,501 - -0.0
2,201,506 - +0.3
2,201,506 - +0.0
2,201,506 - +0.3
2,201,506 - +0.1
2,201,506 - -0.4
2,201,506 - -0.0
2,201,506 - -0.5
2,201,506 - -0.6
2,201,506 - +0.3
2,201,506 - +0.0
2,201,506 - -0.4
2,201,506 - -0.2
2,201,506 - -1.4
2,201,506 - -0.2
2,201,511 - +0.7
2,201,548 - +0.1
2,201,569 - +0.2
2,201,569 - -0.9
2,201,569 - -0.5
2,201,569 - -0.5
2,201,590 - +0.5
2,201,601 - +0.6
2,201,611 - -0.2
2,201,611 - -0.8
2,201,611 - -1.3
2,201,611 - +0.3
2,201,611 - +0.8
2,201,611 - +0.7
2,201,652 - -0.8
2,201,869 + +0.0
2,201,912 + +0.3
2,201,921 + MPMX26_02143 0.10 -1.1
2,201,921 + MPMX26_02143 0.10 +0.9
2,201,921 + MPMX26_02143 0.10 +1.0
2,201,929 + MPMX26_02143 0.11 -1.2
2,201,978 + MPMX26_02143 0.17 -0.3
2,201,989 + MPMX26_02143 0.19 +0.5
2,201,989 + MPMX26_02143 0.19 -0.7
2,201,989 + MPMX26_02143 0.19 +0.6
2,201,989 + MPMX26_02143 0.19 -0.9
2,201,999 + MPMX26_02143 0.20 +0.2
2,201,999 + MPMX26_02143 0.20 +0.7
2,201,999 + MPMX26_02143 0.20 +0.2
2,201,999 + MPMX26_02143 0.20 -0.7
2,202,085 + MPMX26_02143 0.30 +0.1
2,202,086 + MPMX26_02143 0.31 +0.3
2,202,128 + MPMX26_02143 0.36 -0.1
2,202,128 + MPMX26_02143 0.36 +1.5
2,202,128 + MPMX26_02143 0.36 +0.0
2,202,128 + MPMX26_02143 0.36 +0.3
2,202,158 + MPMX26_02143 0.40 -0.6
2,202,253 + MPMX26_02143 0.51 -2.1
2,202,344 + MPMX26_02143 0.63 +0.6
2,202,419 + MPMX26_02143 0.72 +0.5
2,202,427 + MPMX26_02143 0.73 +0.3
2,202,427 + MPMX26_02143 0.73 -0.6
2,202,427 + MPMX26_02143 0.73 -1.7
2,202,427 + MPMX26_02143 0.73 +0.4
2,202,446 + MPMX26_02143 0.75 -0.3
2,202,515 + MPMX26_02143 0.84 -0.6
2,202,515 + MPMX26_02143 0.84 -1.1
2,202,515 + MPMX26_02143 0.84 -0.7
2,202,515 + MPMX26_02143 0.84 -0.0
2,202,586 + -0.9
2,202,967 + -0.8
2,202,968 + -1.6
2,203,162 + MPMX26_02144 0.21 +0.5
2,203,288 + MPMX26_02144 0.29 -0.4
2,203,402 + MPMX26_02144 0.37 +0.8
2,203,500 + MPMX26_02144 0.44 +0.7
2,203,540 + MPMX26_02144 0.47 +0.6
2,203,540 + MPMX26_02144 0.47 -0.2
2,203,540 + MPMX26_02144 0.47 -0.4
2,203,540 + MPMX26_02144 0.47 +0.5
2,203,540 + MPMX26_02144 0.47 -0.5
2,203,540 + MPMX26_02144 0.47 -0.3
2,203,540 + MPMX26_02144 0.47 -0.7
2,203,551 + MPMX26_02144 0.48 -1.6
2,203,615 + MPMX26_02144 0.52 -0.0
2,203,615 + MPMX26_02144 0.52 +0.2
2,203,633 + MPMX26_02144 0.54 -0.6

Or see this region's nucleotide sequence